RNA–Protein interactions for RNA: ENST00000547872.1

CBX5-203, Transcript of chromobox 5, humanhuman

TSL 2

Gene CBX5, Length 745 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX5-203ENST00000547872 MOXD1Q6UVY6 613 aa4.29□□□□□ -1.72
CBX5-203ENST00000547872 CATSPER3Q86XQ3 398 aa4.29□□□□□ -1.72
CBX5-203ENST00000547872 PAQR4Q8N4S7 273 aaPredicted RBP4.29□□□□□ -1.72
CBX5-203ENST00000547872 ARFGAP1Q8N6T3 406 aa4.29□□□□□ -1.72
CBX5-203ENST00000547872 OR6Y1Q8NGX8 325 aa4.29□□□□□ -1.72
CBX5-203ENST00000547872 MPLKIPQ8TAP9 179 aa4.29□□□□□ -1.72
CBX5-203ENST00000547872 SCARB1Q8WTV0 552 aa4.29□□□□□ -1.72
CBX5-203ENST00000547872 DNASE2BQ8WZ79 361 aa4.29□□□□□ -1.72
CBX5-203ENST00000547872 GOLGA1Q92805 767 aa4.29□□□□□ -1.72
CBX5-203ENST00000547872 MYLPFQ96A32 169 aa4.29□□□□□ -1.72
CBX5-203ENST00000547872 JAKMIP2Q96AA8 810 aa4.29□□□□□ -1.72
CBX5-203ENST00000547872 ARRDC3Q96B67 414 aa4.29□□□□□ -1.72
CBX5-203ENST00000547872 BIRC7Q96CA5 298 aa4.29□□□□□ -1.72
CBX5-203ENST00000547872 WBP1Q96G27 269 aa4.29□□□□□ -1.72
CBX5-203ENST00000547872 ADAD1Q96M93 576 aaKnown RBP4.29□□□□□ -1.72
CBX5-203ENST00000547872 ZNF578Q96N58 590 aaPredicted RBP4.29□□□□□ -1.72
CBX5-203ENST00000547872 PLIN2Q99541 437 aa4.29□□□□□ -1.72
CBX5-203ENST00000547872 PIMREGQ9BSJ6 248 aa4.29□□□□□ -1.72
CBX5-203ENST00000547872 FOXP1Q9H334 677 aaPredicted RBP4.29□□□□□ -1.72
CBX5-203ENST00000547872 PDE11AQ9HCR9 933 aa4.29□□□□□ -1.72
CBX5-203ENST00000547872 PTPRHQ9HD43 1115 aa4.29□□□□□ -1.72
CBX5-203ENST00000547872 SAYSD1Q9NPB0 183 aa4.29□□□□□ -1.72
CBX5-203ENST00000547872 ZNF71Q9NQZ8 489 aaPredicted RBP4.29□□□□□ -1.72
CBX5-203ENST00000547872 THSD1Q9NS62 852 aa4.29□□□□□ -1.72
CBX5-203ENST00000547872 HEY2Q9UBP5 337 aa4.29□□□□□ -1.72
CBX5-203ENST00000547872 SLC25A13Q9UJS0 675 aa4.29□□□□□ -1.72
CBX5-203ENST00000547872 UTS2RQ9UKP6 389 aa4.29□□□□□ -1.72
CBX5-203ENST00000547872 APC2O95996 2303 aa4.29□□□□□ -1.72
CBX5-203ENST00000547872 MYOFQ9NZM1 2061 aa4.28□□□□□ -1.72
CBX5-203ENST00000547872 A0A1B0GTQ1 180 aa4.28□□□□□ -1.72
CBX5-203ENST00000547872 MCIDASD6RGH6 385 aa4.28□□□□□ -1.72
CBX5-203ENST00000547872 E9PMD0 336 aa4.28□□□□□ -1.72
CBX5-203ENST00000547872 RHODO00212 210 aa4.28□□□□□ -1.72
CBX5-203ENST00000547872 CASC3O15234 703 aaKnown RBP4.28□□□□□ -1.72
CBX5-203ENST00000547872 MSI1O43347 362 aaKnown RBP4.28□□□□□ -1.72
CBX5-203ENST00000547872 HNRNPRO43390 633 aaKnown RBP4.28□□□□□ -1.72
CBX5-203ENST00000547872 DEXIO95424 95 aa4.28□□□□□ -1.72
CBX5-203ENST00000547872 SEMA4FO95754 770 aa4.28□□□□□ -1.72
CBX5-203ENST00000547872 BMP15O95972 392 aa4.28□□□□□ -1.72
CBX5-203ENST00000547872 GCFC2P16383 781 aaKnown RBP4.28□□□□□ -1.72
CBX5-203ENST00000547872 EPHA8P29322 1005 aaPredicted RBP4.28□□□□□ -1.72
CBX5-203ENST00000547872 KRT2P35908 639 aa4.28□□□□□ -1.72
CBX5-203ENST00000547872 EIF2DP41214 584 aaKnown RBP4.28□□□□□ -1.72
CBX5-203ENST00000547872 AARSP49588 968 aaKnown RBP eCLIP4.28□□□□□ -1.72
CBX5-203ENST00000547872 ACOT2P49753 483 aa4.28□□□□□ -1.72
CBX5-203ENST00000547872 TAF10Q12962 218 aa4.28□□□□□ -1.72
CBX5-203ENST00000547872 PDCLQ13371 301 aa4.28□□□□□ -1.72
CBX5-203ENST00000547872 LAMB3Q13751 1172 aa4.28□□□□□ -1.72
CBX5-203ENST00000547872 DRAP1Q14919 205 aaPredicted RBP4.28□□□□□ -1.72
CBX5-203ENST00000547872 NECTIN1Q15223 517 aa4.28□□□□□ -1.72
CBX5-203ENST00000547872 SHBQ15464 509 aa4.28□□□□□ -1.72
CBX5-203ENST00000547872 MIDNQ504T8 468 aa4.28□□□□□ -1.72
CBX5-203ENST00000547872 ARL13AQ5H913 290 aaPredicted RBP4.28□□□□□ -1.72
CBX5-203ENST00000547872 JMJD6Q6NYC1 403 aaPredicted RBP4.28□□□□□ -1.72
CBX5-203ENST00000547872 BLOC1S2Q6QNY1 142 aa4.28□□□□□ -1.72
CBX5-203ENST00000547872 RFX8Q6ZV50 586 aa4.28□□□□□ -1.72
CBX5-203ENST00000547872 MDGA2Q7Z553 956 aa4.28□□□□□ -1.72
CBX5-203ENST00000547872 DDIASQ8IXT1 998 aa4.28□□□□□ -1.72
CBX5-203ENST00000547872 SMC5Q8IY18 1101 aa4.28□□□□□ -1.72
CBX5-203ENST00000547872 ADGRF2Q8IZF7 708 aa4.28□□□□□ -1.72
CBX5-203ENST00000547872 PDCL2Q8N4E4 241 aa4.28□□□□□ -1.72
CBX5-203ENST00000547872 ENDOVQ8N8Q3 282 aaKnown RBP4.28□□□□□ -1.72
CBX5-203ENST00000547872 NRACQ8N912 160 aa4.28□□□□□ -1.72
CBX5-203ENST00000547872 SLC2A12Q8TD20 617 aa4.28□□□□□ -1.72
CBX5-203ENST00000547872 WIPF2Q8TF74 440 aaPredicted RBP4.28□□□□□ -1.72
CBX5-203ENST00000547872 C2orf15Q8WU43 125 aaKnown RBP4.28□□□□□ -1.72
CBX5-203ENST00000547872 IGFBPL1Q8WX77 278 aa4.28□□□□□ -1.72
CBX5-203ENST00000547872 TRIM63Q969Q1 353 aa4.28□□□□□ -1.72
CBX5-203ENST00000547872 ATXN7L3BQ96GX2 97 aa4.28□□□□□ -1.72
CBX5-203ENST00000547872 ZNF48Q96MX3 618 aaPredicted RBP4.28□□□□□ -1.72
CBX5-203ENST00000547872 XPO6Q96QU8 1125 aaKnown RBP4.28□□□□□ -1.72
CBX5-203ENST00000547872 HSD17B14Q9BPX1 270 aa4.28□□□□□ -1.72
CBX5-203ENST00000547872 NUP58Q9BVL2 599 aa4.28□□□□□ -1.72
CBX5-203ENST00000547872 ABCG4Q9H172 646 aa4.28□□□□□ -1.72
CBX5-203ENST00000547872 MYLK2Q9H1R3 596 aa4.28□□□□□ -1.72
CBX5-203ENST00000547872 LHX5Q9H2C1 402 aa4.28□□□□□ -1.72
CBX5-203ENST00000547872 ZHX3Q9H4I2 956 aa4.28□□□□□ -1.72
CBX5-203ENST00000547872 AAMDCQ9H7C9 122 aa4.28□□□□□ -1.72
CBX5-203ENST00000547872 SPHK2Q9NRA0 654 aa4.28□□□□□ -1.72
CBX5-203ENST00000547872 STARD5Q9NSY2 213 aa4.28□□□□□ -1.72
CBX5-203ENST00000547872 DDX19AQ9NUU7 478 aaKnown RBP4.28□□□□□ -1.72
CBX5-203ENST00000547872 KCND3Q9UK17 655 aa4.28□□□□□ -1.72
CBX5-203ENST00000547872 AGO2Q9UKV8 859 aaKnown RBP4.28□□□□□ -1.72
CBX5-203ENST00000547872 LAMP3Q9UQV4 416 aa4.28□□□□□ -1.72
CBX5-203ENST00000547872 ZSCAN21Q9Y5A6 473 aaPredicted RBP4.28□□□□□ -1.72
CBX5-203ENST00000547872 PCDHGA1Q9Y5H4 931 aa4.28□□□□□ -1.72
CBX5-203ENST00000547872 SNX9Q9Y5X1 595 aa4.28□□□□□ -1.72
CBX5-203ENST00000547872 ATMQ13315 3056 aa4.27□□□□□ -1.73
CBX5-203ENST00000547872 TRBV5-3A0A0A0MS03 114 aa4.27□□□□□ -1.73
CBX5-203ENST00000547872 KIR2DS5A0A0G2JLQ3 304 aa4.27□□□□□ -1.73
CBX5-203ENST00000547872 A0A1B0GVM2 712 aa4.27□□□□□ -1.73
CBX5-203ENST00000547872 ZNF840PA6NDX5 716 aa4.27□□□□□ -1.73
CBX5-203ENST00000547872 CXorf65A6NEN9 183 aa4.27□□□□□ -1.73
CBX5-203ENST00000547872 PP2D1A8MPX8 630 aa4.27□□□□□ -1.73
CBX5-203ENST00000547872 KPNA7A9QM74 516 aa4.27□□□□□ -1.73
CBX5-203ENST00000547872 E7EVH7 732 aa4.27□□□□□ -1.73
CBX5-203ENST00000547872 F8VP50 259 aa4.27□□□□□ -1.73
CBX5-203ENST00000547872 K7ENM7 598 aa4.27□□□□□ -1.73
CBX5-203ENST00000547872 KIR2DS3K7RE56 304 aa4.27□□□□□ -1.73
CBX5-203ENST00000547872 MDM4O15151 490 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms