RNA–Protein interactions for RNA: ENST00000547555.5

LETMD1-210, Transcript of LETM1 domain containing 1, humanhuman

TSL 5

Gene LETMD1, Length 1,658 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-210ENST00000547555 RAD23AP54725 363 aa16.78■□□□□ 0.28
LETMD1-210ENST00000547555 CSNK2BP67870 215 aa16.78■□□□□ 0.28
LETMD1-210ENST00000547555 PITX1P78337 314 aaPredicted RBP16.78■□□□□ 0.28
LETMD1-210ENST00000547555 NTHL1P78549 312 aa16.78■□□□□ 0.28
LETMD1-210ENST00000547555 PRKG2Q13237 762 aa16.78■□□□□ 0.28
LETMD1-210ENST00000547555 SMAD4Q13485 552 aaKnown RBP16.78■□□□□ 0.28
LETMD1-210ENST00000547555 RBM20Q5T481 1227 aaKnown RBP16.78■□□□□ 0.28
LETMD1-210ENST00000547555 GLYATQ6IB77 296 aa16.78■□□□□ 0.28
LETMD1-210ENST00000547555 OTOP3Q7RTS5 596 aa16.78■□□□□ 0.28
LETMD1-210ENST00000547555 SVOPQ8N4V2 548 aa16.78■□□□□ 0.28
LETMD1-210ENST00000547555 CHDHQ8NE62 594 aaPredicted RBP16.78■□□□□ 0.28
LETMD1-210ENST00000547555 BPIFB6Q8NFQ5 453 aa16.78■□□□□ 0.28
LETMD1-210ENST00000547555 OR6Q1Q8NGQ2 317 aa16.78■□□□□ 0.28
LETMD1-210ENST00000547555 STAG3L4Q8TBR4 150 aa16.78■□□□□ 0.28
LETMD1-210ENST00000547555 VPS33AQ96AX1 596 aa16.78■□□□□ 0.28
LETMD1-210ENST00000547555 PHF21BQ96EK2 531 aa16.78■□□□□ 0.28
LETMD1-210ENST00000547555 RIPOR3Q96MK2 946 aa16.78■□□□□ 0.28
LETMD1-210ENST00000547555 TRIT1Q9H3H1 467 aaKnown RBP16.78■□□□□ 0.28
LETMD1-210ENST00000547555 POLG2Q9UHN1 485 aa16.78■□□□□ 0.28
LETMD1-210ENST00000547555 HELZP42694 1942 aaKnown RBP16.78■□□□□ 0.28
LETMD1-210ENST00000547555 G3V2T6 193 aa16.78■□□□□ 0.28
LETMD1-210ENST00000547555 ZNF197O14709 1029 aa16.78■□□□□ 0.28
LETMD1-210ENST00000547555 RGS13O14921 159 aa16.78■□□□□ 0.28
LETMD1-210ENST00000547555 KLK8O60259 260 aa16.78■□□□□ 0.28
LETMD1-210ENST00000547555 TPST1O60507 370 aa16.78■□□□□ 0.28
LETMD1-210ENST00000547555 MOSPD3O75425 235 aa16.78■□□□□ 0.28
LETMD1-210ENST00000547555 S1PR4O95977 384 aa16.78■□□□□ 0.28
LETMD1-210ENST00000547555 JUNDP17535 347 aa16.78■□□□□ 0.28
LETMD1-210ENST00000547555 RPL10P27635 214 aaKnown RBP16.78■□□□□ 0.28
LETMD1-210ENST00000547555 POLR2JP52435 117 aaKnown RBP16.78■□□□□ 0.28
LETMD1-210ENST00000547555 PPP2R2BQ00005 443 aa16.78■□□□□ 0.28
LETMD1-210ENST00000547555 FADDQ13158 208 aa16.78■□□□□ 0.28
LETMD1-210ENST00000547555 SMAD1Q15797 465 aaKnown RBP16.78■□□□□ 0.28
LETMD1-210ENST00000547555 ATAT1Q5SQI0 421 aa16.78■□□□□ 0.28
LETMD1-210ENST00000547555 ANKS6Q68DC2 871 aa16.78■□□□□ 0.28
LETMD1-210ENST00000547555 CLEC6AQ6EIG7 209 aa16.78■□□□□ 0.28
LETMD1-210ENST00000547555 KDELC1Q6UW63 502 aa16.78■□□□□ 0.28
LETMD1-210ENST00000547555 RNF165Q6ZSG1 346 aa16.78■□□□□ 0.28
LETMD1-210ENST00000547555 MON1AQ86VX9 555 aa16.78■□□□□ 0.28
LETMD1-210ENST00000547555 ADHFE1Q8IWW8 467 aa16.78■□□□□ 0.28
LETMD1-210ENST00000547555 CADM3Q8N126 398 aa16.78■□□□□ 0.28
LETMD1-210ENST00000547555 CLEC4FQ8N1N0 589 aa16.78■□□□□ 0.28
LETMD1-210ENST00000547555 NECTIN4Q96NY8 510 aa16.78■□□□□ 0.28
LETMD1-210ENST00000547555 CSF3RQ99062 836 aa16.78■□□□□ 0.28
LETMD1-210ENST00000547555 EHD1Q9H4M9 534 aa16.78■□□□□ 0.28
LETMD1-210ENST00000547555 FBRSL1Q9HCM7 1045 aaKnown RBP16.78■□□□□ 0.28
LETMD1-210ENST00000547555 ACSS2Q9NR19 701 aa16.78■□□□□ 0.28
LETMD1-210ENST00000547555 WARS2Q9UGM6 360 aaKnown RBP16.78■□□□□ 0.28
LETMD1-210ENST00000547555 TPRKBQ9Y3C4 175 aa16.78■□□□□ 0.28
LETMD1-210ENST00000547555 NUP210Q8TEM1 1887 aaPredicted RBP16.78■□□□□ 0.28
LETMD1-210ENST00000547555 ZNF840PA6NDX5 716 aa16.77■□□□□ 0.28
LETMD1-210ENST00000547555 M0R3G1 203 aa16.77■□□□□ 0.28
LETMD1-210ENST00000547555 SCELO95171 688 aa16.77■□□□□ 0.28
LETMD1-210ENST00000547555 IGLV3-25P01717 112 aa16.77■□□□□ 0.28
LETMD1-210ENST00000547555 GGT1P19440 569 aa16.77■□□□□ 0.28
LETMD1-210ENST00000547555 PCMT1P22061 227 aa16.77■□□□□ 0.28
LETMD1-210ENST00000547555 PGFP49763 221 aa16.77■□□□□ 0.28
LETMD1-210ENST00000547555 EIF4EBP2Q13542 120 aaPredicted RBP16.77■□□□□ 0.28
LETMD1-210ENST00000547555 HIST2H2ACQ16777 129 aaPredicted RBP16.77■□□□□ 0.28
LETMD1-210ENST00000547555 ZNF181Q2M3W8 571 aa16.77■□□□□ 0.28
LETMD1-210ENST00000547555 LEXMQ3ZCV2 418 aa16.77■□□□□ 0.28
LETMD1-210ENST00000547555 PITRM1Q5JRX3 1037 aa16.77■□□□□ 0.28
LETMD1-210ENST00000547555 SYT6Q5T7P8 510 aaPredicted RBP16.77■□□□□ 0.28
LETMD1-210ENST00000547555 MANEALQ5VSG8 457 aa16.77■□□□□ 0.28
LETMD1-210ENST00000547555 THOC7Q6I9Y2 204 aaKnown RBP16.77■□□□□ 0.28
LETMD1-210ENST00000547555 MRNIPQ6NTE8 343 aa16.77■□□□□ 0.28
LETMD1-210ENST00000547555 SCD5Q86SK9 330 aa16.77■□□□□ 0.28
LETMD1-210ENST00000547555 ZFAND4Q86XD8 727 aa16.77■□□□□ 0.28
LETMD1-210ENST00000547555 ARHGAP12Q8IWW6 846 aa16.77■□□□□ 0.28
LETMD1-210ENST00000547555 ZCCHC7Q8N3Z6 543 aaKnown RBP16.77■□□□□ 0.28
LETMD1-210ENST00000547555 MFSD4AQ8N468 514 aa16.77■□□□□ 0.28
LETMD1-210ENST00000547555 PTGR2Q8N8N7 351 aaPredicted RBP16.77■□□□□ 0.28
LETMD1-210ENST00000547555 ITFG1Q8TB96 612 aa16.77■□□□□ 0.28
LETMD1-210ENST00000547555 TMBIM1Q969X1 311 aa16.77■□□□□ 0.28
LETMD1-210ENST00000547555 KIAA1191Q96A73 305 aa16.77■□□□□ 0.28
LETMD1-210ENST00000547555 TCEAL4Q96EI5 215 aa16.77■□□□□ 0.28
LETMD1-210ENST00000547555 REXO5Q96IC2 774 aaKnown RBP16.77■□□□□ 0.28
LETMD1-210ENST00000547555 RNF145Q96MT1 663 aa16.77■□□□□ 0.28
LETMD1-210ENST00000547555 DERL2Q9GZP9 239 aa16.77■□□□□ 0.28
LETMD1-210ENST00000547555 TKTL2Q9H0I9 626 aa16.77■□□□□ 0.28
LETMD1-210ENST00000547555 ALG9Q9H6U8 611 aa16.77■□□□□ 0.28
LETMD1-210ENST00000547555 NMUR1Q9HB89 426 aa16.77■□□□□ 0.28
LETMD1-210ENST00000547555 TLR8Q9NR97 1041 aaKnown RBP16.77■□□□□ 0.28
LETMD1-210ENST00000547555 HEBP1Q9NRV9 189 aa16.77■□□□□ 0.28
LETMD1-210ENST00000547555 NPAP1Q9NZP6 1156 aa16.77■□□□□ 0.28
LETMD1-210ENST00000547555 KLHL3Q9UH77 587 aa16.77■□□□□ 0.28
LETMD1-210ENST00000547555 A0A1W2PRU2 124 aa16.76■□□□□ 0.27
LETMD1-210ENST00000547555 YJEFN3A6XGL0 299 aa16.76■□□□□ 0.27
LETMD1-210ENST00000547555 TMX2-CTNND1H3BSU7 103 aa16.76■□□□□ 0.27
LETMD1-210ENST00000547555 MSI1O43347 362 aaKnown RBP16.76■□□□□ 0.27
LETMD1-210ENST00000547555 MBTPS2O43462 519 aa16.76■□□□□ 0.27
LETMD1-210ENST00000547555 FOXD2O60548 495 aaPredicted RBP16.76■□□□□ 0.27
LETMD1-210ENST00000547555 SNX2O60749 519 aa16.76■□□□□ 0.27
LETMD1-210ENST00000547555 RPS17P08708 135 aaKnown RBP16.76■□□□□ 0.27
LETMD1-210ENST00000547555 MSH3P20585 1137 aa16.76■□□□□ 0.27
LETMD1-210ENST00000547555 HRH2P25021 359 aa16.76■□□□□ 0.27
LETMD1-210ENST00000547555 RENBPP51606 427 aa16.76■□□□□ 0.27
LETMD1-210ENST00000547555 PHC1P78364 1004 aa16.76■□□□□ 0.27
LETMD1-210ENST00000547555 ECT2LQ008S8 904 aa16.76■□□□□ 0.27
LETMD1-210ENST00000547555 CLCQ05315 142 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms