RNA–Protein interactions for RNA: ENST00000546803.5

CCDC38-203, Transcript of coiled-coil domain containing 38, humanhuman

TSL 4

Gene CCDC38, Length 511 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-203ENST00000546803 AKAP7Q9P0M2 348 aaPredicted RBP16.36■□□□□ 0.21
CCDC38-203ENST00000546803 TRMT6Q9UJA5 497 aaKnown RBP16.36■□□□□ 0.21
CCDC38-203ENST00000546803 NFU1Q9UMS0 254 aa16.36■□□□□ 0.21
CCDC38-203ENST00000546803 VWA7Q9Y334 891 aa16.36■□□□□ 0.21
CCDC38-203ENST00000546803 PSAT1Q9Y617 370 aa16.36■□□□□ 0.21
CCDC38-203ENST00000546803 GOLGA4Q13439 2230 aaKnown RBP16.35■□□□□ 0.21
CCDC38-203ENST00000546803 CCDC187A0A096LP49 1063 aa16.35■□□□□ 0.21
CCDC38-203ENST00000546803 OR5K3A6NET4 321 aa16.35■□□□□ 0.21
CCDC38-203ENST00000546803 HGSO14964 777 aaPredicted RBP16.35■□□□□ 0.21
CCDC38-203ENST00000546803 C1QAP02745 245 aa16.35■□□□□ 0.21
CCDC38-203ENST00000546803 C9P02748 559 aa16.35■□□□□ 0.21
CCDC38-203ENST00000546803 THRAP10827 490 aa16.35■□□□□ 0.21
CCDC38-203ENST00000546803 CCNFP41002 786 aa16.35■□□□□ 0.21
CCDC38-203ENST00000546803 PRKG2Q13237 762 aa16.35■□□□□ 0.21
CCDC38-203ENST00000546803 KYNUQ16719 465 aa16.35■□□□□ 0.21
CCDC38-203ENST00000546803 RBM20Q5T481 1227 aaKnown RBP16.35■□□□□ 0.21
CCDC38-203ENST00000546803 PHF19Q5T6S3 580 aa16.35■□□□□ 0.21
CCDC38-203ENST00000546803 HECTD2Q5U5R9 776 aa16.35■□□□□ 0.21
CCDC38-203ENST00000546803 LRRC8EQ6NSJ5 796 aa16.35■□□□□ 0.21
CCDC38-203ENST00000546803 ARMC6Q6NXE6 501 aa16.35■□□□□ 0.21
CCDC38-203ENST00000546803 OOSP2Q86WS3 158 aa16.35■□□□□ 0.21
CCDC38-203ENST00000546803 DCUN1D3Q8IWE4 304 aa16.35■□□□□ 0.21
CCDC38-203ENST00000546803 GPATCH11Q8N954 259 aa16.35■□□□□ 0.21
CCDC38-203ENST00000546803 OR4E2Q8NGC2 313 aa16.35■□□□□ 0.21
CCDC38-203ENST00000546803 CFAP61Q8NHU2 1237 aa16.35■□□□□ 0.21
CCDC38-203ENST00000546803 GIMAP7Q8NHV1 300 aa16.35■□□□□ 0.21
CCDC38-203ENST00000546803 WDR36Q8NI36 951 aaKnown RBP16.35■□□□□ 0.21
CCDC38-203ENST00000546803 CD200R1Q8TD46 325 aa16.35■□□□□ 0.21
CCDC38-203ENST00000546803 MAGEC3Q8TD91 643 aa16.35■□□□□ 0.21
CCDC38-203ENST00000546803 FBF1Q8TES7 1133 aa16.35■□□□□ 0.21
CCDC38-203ENST00000546803 RSC1A1Q92681 617 aa16.35■□□□□ 0.21
CCDC38-203ENST00000546803 CCDC74BQ96LY2 380 aa16.35■□□□□ 0.21
CCDC38-203ENST00000546803 CMKLR1Q99788 373 aa16.35■□□□□ 0.21
CCDC38-203ENST00000546803 SRMSQ9H3Y6 488 aa16.35■□□□□ 0.21
CCDC38-203ENST00000546803 MN1Q10571 1320 aaPredicted RBP16.35■□□□□ 0.21
CCDC38-203ENST00000546803 CACNA1AO00555 2505 aa16.35■□□□□ 0.21
CCDC38-203ENST00000546803 ARHGEF17Q96PE2 2063 aaPredicted RBP16.34■□□□□ 0.21
CCDC38-203ENST00000546803 TRABD2BA6NFA1 517 aa16.34■□□□□ 0.21
CCDC38-203ENST00000546803 CXorf49A8MYA2 514 aaPredicted RBP16.34■□□□□ 0.21
CCDC38-203ENST00000546803 MATN2O00339 956 aa16.34■□□□□ 0.21
CCDC38-203ENST00000546803 TOX3O15405 576 aaPredicted RBP16.34■□□□□ 0.21
CCDC38-203ENST00000546803 CAPN5O15484 640 aaPredicted RBP16.34■□□□□ 0.21
CCDC38-203ENST00000546803 SLU7O95391 586 aaKnown RBP16.34■□□□□ 0.21
CCDC38-203ENST00000546803 MATN4O95460 622 aa16.34■□□□□ 0.21
CCDC38-203ENST00000546803 MPC1LP0DKB6 136 aa16.34■□□□□ 0.21
CCDC38-203ENST00000546803 FDXRP22570 491 aa16.34■□□□□ 0.21
CCDC38-203ENST00000546803 SHMT2P34897 504 aa16.34■□□□□ 0.21
CCDC38-203ENST00000546803 GP5P40197 560 aa16.34■□□□□ 0.21
CCDC38-203ENST00000546803 ABCG1P45844 678 aa16.34■□□□□ 0.21
CCDC38-203ENST00000546803 LSSP48449 732 aa16.34■□□□□ 0.21
CCDC38-203ENST00000546803 RGS4P49798 205 aa16.34■□□□□ 0.21
CCDC38-203ENST00000546803 CDKN2DP55273 166 aa16.34■□□□□ 0.21
CCDC38-203ENST00000546803 PRKAA1Q13131 559 aa16.34■□□□□ 0.21
CCDC38-203ENST00000546803 RTP5Q14D33 572 aa16.34■□□□□ 0.21
CCDC38-203ENST00000546803 KLHL38Q2WGJ6 581 aa16.34■□□□□ 0.21
CCDC38-203ENST00000546803 KBTBD12Q3ZCT8 623 aa16.34■□□□□ 0.21
CCDC38-203ENST00000546803 AMIGO1Q86WK6 493 aa16.34■□□□□ 0.21
CCDC38-203ENST00000546803 CTAGE3PQ8IX95 158 aa16.34■□□□□ 0.21
CCDC38-203ENST00000546803 JPH3Q8WXH2 748 aaPredicted RBP16.34■□□□□ 0.21
CCDC38-203ENST00000546803 GATA6Q92908 595 aa16.34■□□□□ 0.21
CCDC38-203ENST00000546803 RAD51AP1Q96B01 352 aa16.34■□□□□ 0.21
CCDC38-203ENST00000546803 NXPE2Q96DL1 559 aa16.34■□□□□ 0.21
CCDC38-203ENST00000546803 CD180Q99467 661 aa16.34■□□□□ 0.21
CCDC38-203ENST00000546803 SLC30A3Q99726 388 aa16.34■□□□□ 0.21
CCDC38-203ENST00000546803 MCMBPQ9BTE3 642 aa16.34■□□□□ 0.21
CCDC38-203ENST00000546803 CDC42EP4Q9H3Q1 356 aaKnown RBP16.34■□□□□ 0.21
CCDC38-203ENST00000546803 HRASLS2Q9NWW9 162 aa16.34■□□□□ 0.21
CCDC38-203ENST00000546803 NINJ2Q9NZG7 142 aa16.34■□□□□ 0.21
CCDC38-203ENST00000546803 TMEM9Q9P0T7 183 aa16.34■□□□□ 0.21
CCDC38-203ENST00000546803 OR6C74A6NCV1 312 aa16.33■□□□□ 0.2
CCDC38-203ENST00000546803 C1orf105O95561 183 aa16.33■□□□□ 0.2
CCDC38-203ENST00000546803 TIAL1Q01085 375 aaKnown RBP eCLIP16.33■□□□□ 0.2
CCDC38-203ENST00000546803 PDAP1Q13442 181 aaKnown RBP16.33■□□□□ 0.2
CCDC38-203ENST00000546803 GRTP1Q5TC63 336 aa16.33■□□□□ 0.2
CCDC38-203ENST00000546803 RAB11FIP2Q7L804 512 aa16.33■□□□□ 0.2
CCDC38-203ENST00000546803 LSMEM2Q8N112 164 aa16.33■□□□□ 0.2
CCDC38-203ENST00000546803 PPM1NQ8N819 430 aa16.33■□□□□ 0.2
CCDC38-203ENST00000546803 VPS39Q96JC1 886 aa16.33■□□□□ 0.2
CCDC38-203ENST00000546803 ELMO2Q96JJ3 720 aa16.33■□□□□ 0.2
CCDC38-203ENST00000546803 CYTH2Q99418 400 aa16.33■□□□□ 0.2
CCDC38-203ENST00000546803 FUT8Q9BYC5 575 aa16.33■□□□□ 0.2
CCDC38-203ENST00000546803 POLR1BQ9H9Y6 1135 aa16.33■□□□□ 0.2
CCDC38-203ENST00000546803 OR6C2Q9NZP2 312 aa16.33■□□□□ 0.2
CCDC38-203ENST00000546803 TDRKHQ9Y2W6 561 aaKnown RBP16.33■□□□□ 0.2
CCDC38-203ENST00000546803 PCDHGA8Q9Y5G5 932 aa16.33■□□□□ 0.2
CCDC38-203ENST00000546803 ASXL3Q9C0F0 2248 aa16.33■□□□□ 0.2
CCDC38-203ENST00000546803 FAM95CA0A1B0GW59 222 aa16.32■□□□□ 0.2
CCDC38-203ENST00000546803 PLD2O14939 933 aa16.32■□□□□ 0.2
CCDC38-203ENST00000546803 PSIP1O75475 530 aaKnown RBP16.32■□□□□ 0.2
CCDC38-203ENST00000546803 PIAS1O75925 651 aa16.32■□□□□ 0.2
CCDC38-203ENST00000546803 CATP04040 527 aaKnown RBP16.32■□□□□ 0.2
CCDC38-203ENST00000546803 ANKRD34CP0C6C1 535 aa16.32■□□□□ 0.2
CCDC38-203ENST00000546803 MCM3P25205 808 aa16.32■□□□□ 0.2
CCDC38-203ENST00000546803 MPSTP25325 297 aa16.32■□□□□ 0.2
CCDC38-203ENST00000546803 CSTF2P33240 577 aaKnown RBP eCLIP16.32■□□□□ 0.2
CCDC38-203ENST00000546803 MLLT3P42568 568 aaPredicted RBP16.32■□□□□ 0.2
CCDC38-203ENST00000546803 GFERP55789 205 aa16.32■□□□□ 0.2
CCDC38-203ENST00000546803 IRGCQ6NXR0 463 aa16.32■□□□□ 0.2
CCDC38-203ENST00000546803 PAQR3Q6TCH7 311 aa16.32■□□□□ 0.2
CCDC38-203ENST00000546803 CYHR1Q6ZMK1 362 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms