RNA–Protein interactions for RNA: ENST00000546298.5

YBX3-218, Transcript of Y-box binding protein 3, humanhuman

TSL 4

Gene YBX3, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-218ENST00000546298 APRTP07741 180 aa9.08□□□□□ -0.96
YBX3-218ENST00000546298 CCDC175P0C221 793 aa9.08□□□□□ -0.96
YBX3-218ENST00000546298 PRSS56P0CW18 603 aa9.08□□□□□ -0.96
YBX3-218ENST00000546298 CYP2A7P20853 494 aa9.08□□□□□ -0.96
YBX3-218ENST00000546298 CASRP41180 1078 aa9.08□□□□□ -0.96
YBX3-218ENST00000546298 PMS2P54278 862 aa9.08□□□□□ -0.96
YBX3-218ENST00000546298 PRKG2Q13237 762 aa9.08□□□□□ -0.96
YBX3-218ENST00000546298 SNX1Q13596 522 aa9.08□□□□□ -0.96
YBX3-218ENST00000546298 DNAJC21Q5F1R6 531 aaKnown RBP9.08□□□□□ -0.96
YBX3-218ENST00000546298 PCID2Q5JVF3 399 aa9.08□□□□□ -0.96
YBX3-218ENST00000546298 ATP1A1-AS1Q5TC04 95 aa9.08□□□□□ -0.96
YBX3-218ENST00000546298 MEI1Q5TIA1 1274 aa9.08□□□□□ -0.96
YBX3-218ENST00000546298 DRICH1Q6PGQ1 229 aaPredicted RBP9.08□□□□□ -0.96
YBX3-218ENST00000546298 FBXO38Q6PIJ6 1188 aa9.08□□□□□ -0.96
YBX3-218ENST00000546298 PTRH1Q86Y79 214 aaKnown RBP9.08□□□□□ -0.96
YBX3-218ENST00000546298 PPHLN1Q8NEY8 458 aaKnown RBP9.08□□□□□ -0.96
YBX3-218ENST00000546298 OR13J1Q8NGT2 312 aa9.08□□□□□ -0.96
YBX3-218ENST00000546298 OR6P1Q8NGX9 317 aa9.08□□□□□ -0.96
YBX3-218ENST00000546298 OR4L1Q8NH43 312 aa9.08□□□□□ -0.96
YBX3-218ENST00000546298 CLIP3Q96DZ5 547 aa9.08□□□□□ -0.96
YBX3-218ENST00000546298 TCTN2Q96GX1 697 aa9.08□□□□□ -0.96
YBX3-218ENST00000546298 SGSM3Q96HU1 749 aa9.08□□□□□ -0.96
YBX3-218ENST00000546298 PPM1MQ96MI6 270 aa9.08□□□□□ -0.96
YBX3-218ENST00000546298 TLR10Q9BXR5 811 aa9.08□□□□□ -0.96
YBX3-218ENST00000546298 ACTL8Q9H568 366 aa9.08□□□□□ -0.96
YBX3-218ENST00000546298 XKR8Q9H6D3 395 aa9.08□□□□□ -0.96
YBX3-218ENST00000546298 ACTR5Q9H9F9 607 aaPredicted RBP9.08□□□□□ -0.96
YBX3-218ENST00000546298 CASS4Q9NQ75 786 aa9.08□□□□□ -0.96
YBX3-218ENST00000546298 ZNF71Q9NQZ8 489 aaPredicted RBP9.08□□□□□ -0.96
YBX3-218ENST00000546298 HOMER3Q9NSC5 361 aa9.08□□□□□ -0.96
YBX3-218ENST00000546298 ACTR10Q9NZ32 417 aa9.08□□□□□ -0.96
YBX3-218ENST00000546298 OR6C2Q9NZP2 312 aa9.08□□□□□ -0.96
YBX3-218ENST00000546298 BFARQ9NZS9 450 aa9.08□□□□□ -0.96
YBX3-218ENST00000546298 MAN2B2Q9Y2E5 1009 aa9.08□□□□□ -0.96
YBX3-218ENST00000546298 ZKSCAN5Q9Y2L8 839 aa9.08□□□□□ -0.96
YBX3-218ENST00000546298 PRSS21Q9Y6M0 314 aa9.08□□□□□ -0.96
YBX3-218ENST00000546298 SLC5A10A0PJK1 596 aa9.07□□□□□ -0.96
YBX3-218ENST00000546298 OR51F1A6NGY5 319 aa9.07□□□□□ -0.96
YBX3-218ENST00000546298 TMEM150CB9EJG8 249 aa9.07□□□□□ -0.96
YBX3-218ENST00000546298 E7EQ34 232 aa9.07□□□□□ -0.96
YBX3-218ENST00000546298 RPN2P04844 631 aa9.07□□□□□ -0.96
YBX3-218ENST00000546298 APOA4P06727 396 aa9.07□□□□□ -0.96
YBX3-218ENST00000546298 RAB40ALP0C0E4 278 aa9.07□□□□□ -0.96
YBX3-218ENST00000546298 ATXN8OSP0DMR3 200 aa9.07□□□□□ -0.96
YBX3-218ENST00000546298 ST6GAL1P15907 406 aa9.07□□□□□ -0.96
YBX3-218ENST00000546298 AGXTP21549 392 aa9.07□□□□□ -0.96
YBX3-218ENST00000546298 ACADLP28330 430 aa9.07□□□□□ -0.96
YBX3-218ENST00000546298 NPY2RP49146 381 aa9.07□□□□□ -0.96
YBX3-218ENST00000546298 ITGA1P56199 1179 aa9.07□□□□□ -0.96
YBX3-218ENST00000546298 TLE1Q04724 770 aa9.07□□□□□ -0.96
YBX3-218ENST00000546298 ACVR1Q04771 509 aa9.07□□□□□ -0.96
YBX3-218ENST00000546298 KLRB1Q12918 225 aa9.07□□□□□ -0.96
YBX3-218ENST00000546298 GPS2Q13227 327 aa9.07□□□□□ -0.96
YBX3-218ENST00000546298 BRD3Q15059 726 aa9.07□□□□□ -0.96
YBX3-218ENST00000546298 TMED2Q15363 201 aa9.07□□□□□ -0.96
YBX3-218ENST00000546298 UGT8Q16880 541 aa9.07□□□□□ -0.96
YBX3-218ENST00000546298 PLEKHS1Q5SXH7 462 aa9.07□□□□□ -0.96
YBX3-218ENST00000546298 IZUMO3Q5VZ72 239 aa9.07□□□□□ -0.96
YBX3-218ENST00000546298 FAM199XQ6PEV8 388 aaPredicted RBP9.07□□□□□ -0.96
YBX3-218ENST00000546298 SPESP1Q6UW49 350 aa9.07□□□□□ -0.96
YBX3-218ENST00000546298 ZNF517Q6ZMY9 492 aaPredicted RBP9.07□□□□□ -0.96
YBX3-218ENST00000546298 UNC5AQ6ZN44 842 aa9.07□□□□□ -0.96
YBX3-218ENST00000546298 ZNF662Q6ZS27 426 aa9.07□□□□□ -0.96
YBX3-218ENST00000546298 GSTA5Q7RTV2 222 aa9.07□□□□□ -0.96
YBX3-218ENST00000546298 APLFQ8IW19 511 aaPredicted RBP9.07□□□□□ -0.96
YBX3-218ENST00000546298 GPR135Q8IZ08 494 aa9.07□□□□□ -0.96
YBX3-218ENST00000546298 ADGRF3Q8IZF5 1079 aa9.07□□□□□ -0.96
YBX3-218ENST00000546298 MPP5Q8N3R9 675 aa9.07□□□□□ -0.96
YBX3-218ENST00000546298 TRIM58Q8NG06 486 aa9.07□□□□□ -0.96
YBX3-218ENST00000546298 OR5AR1Q8NGP9 310 aa9.07□□□□□ -0.96
YBX3-218ENST00000546298 OR5K2Q8NHB8 316 aa9.07□□□□□ -0.96
YBX3-218ENST00000546298 GSDMBQ8TAX9 411 aa9.07□□□□□ -0.96
YBX3-218ENST00000546298 ASZ1Q8WWH4 475 aa9.07□□□□□ -0.96
YBX3-218ENST00000546298 TRAPPC9Q96Q05 1148 aa9.07□□□□□ -0.96
YBX3-218ENST00000546298 PANX3Q96QZ0 392 aa9.07□□□□□ -0.96
YBX3-218ENST00000546298 C17orf62Q9BQA9 187 aa9.07□□□□□ -0.96
YBX3-218ENST00000546298 DPH2Q9BQC3 489 aaPredicted RBP9.07□□□□□ -0.96
YBX3-218ENST00000546298 CARD6Q9BX69 1037 aa9.07□□□□□ -0.96
YBX3-218ENST00000546298 NLNQ9BYT8 704 aa9.07□□□□□ -0.96
YBX3-218ENST00000546298 TRIM4Q9C037 500 aa9.07□□□□□ -0.96
YBX3-218ENST00000546298 CHRNA10Q9GZZ6 450 aa9.07□□□□□ -0.96
YBX3-218ENST00000546298 CHST8Q9H2A9 424 aa9.07□□□□□ -0.96
YBX3-218ENST00000546298 EIF2B3Q9NR50 452 aaKnown RBP9.07□□□□□ -0.96
YBX3-218ENST00000546298 TDRKHQ9Y2W6 561 aaKnown RBP9.07□□□□□ -0.96
YBX3-218ENST00000546298 TCAF1Q9Y4C2 921 aa9.07□□□□□ -0.96
YBX3-218ENST00000546298 AP1M2Q9Y6Q5 423 aa9.07□□□□□ -0.96
YBX3-218ENST00000546298 C9J4A7 227 aa9.06□□□□□ -0.96
YBX3-218ENST00000546298 BHMG1C9JSJ3 638 aaPredicted RBP9.06□□□□□ -0.96
YBX3-218ENST00000546298 PYCARD-AS1I3L0S3 204 aa9.06□□□□□ -0.96
YBX3-218ENST00000546298 PRMT5O14744 637 aaPredicted RBP9.06□□□□□ -0.96
YBX3-218ENST00000546298 KPNA5O15131 536 aa9.06□□□□□ -0.96
YBX3-218ENST00000546298 PFDN6O15212 129 aa9.06□□□□□ -0.96
YBX3-218ENST00000546298 OR1I1O60431 355 aa9.06□□□□□ -0.96
YBX3-218ENST00000546298 FGGP02679 453 aa9.06□□□□□ -0.96
YBX3-218ENST00000546298 CHRM5P08912 532 aaPredicted RBP9.06□□□□□ -0.96
YBX3-218ENST00000546298 CD63P08962 238 aa9.06□□□□□ -0.96
YBX3-218ENST00000546298 ETS1P14921 441 aa9.06□□□□□ -0.96
YBX3-218ENST00000546298 RPL22P35268 128 aaKnown RBP9.06□□□□□ -0.96
YBX3-218ENST00000546298 GRIA1P42261 906 aa9.06□□□□□ -0.96
YBX3-218ENST00000546298 TTPAP49638 278 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms