RNA–Protein interactions for RNA: ENST00000545305.1

SCARB1-209, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 851 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-209ENST00000545305 FBXO15Q8NCQ5 510 aaPredicted RBP13.45□□□□□ -0.26
SCARB1-209ENST00000545305 UBTD2Q8WUN7 234 aa13.45□□□□□ -0.26
SCARB1-209ENST00000545305 ATL1Q8WXF7 558 aa13.45□□□□□ -0.26
SCARB1-209ENST00000545305 DLG3Q92796 817 aa13.45□□□□□ -0.26
SCARB1-209ENST00000545305 SKA1Q96BD8 255 aa13.45□□□□□ -0.26
SCARB1-209ENST00000545305 RMDN2Q96LZ7 410 aa13.45□□□□□ -0.26
SCARB1-209ENST00000545305 ELAC2Q9BQ52 826 aaKnown RBP13.45□□□□□ -0.26
SCARB1-209ENST00000545305 TRIM55Q9BYV6 548 aa13.45□□□□□ -0.26
SCARB1-209ENST00000545305 ILKAPQ9H0C8 392 aaPredicted RBP13.45□□□□□ -0.26
SCARB1-209ENST00000545305 GPR27Q9NS67 375 aa13.45□□□□□ -0.26
SCARB1-209ENST00000545305 FBXO4Q9UKT5 387 aa13.45□□□□□ -0.26
SCARB1-209ENST00000545305 PSMD13Q9UNM6 376 aa13.45□□□□□ -0.26
SCARB1-209ENST00000545305 ASF1AQ9Y294 204 aa13.45□□□□□ -0.26
SCARB1-209ENST00000545305 RAP2CQ9Y3L5 183 aa13.45□□□□□ -0.26
SCARB1-209ENST00000545305 DGKBQ9Y6T7 804 aa13.45□□□□□ -0.26
SCARB1-209ENST00000545305 EML5Q05BV3 1969 aa13.45□□□□□ -0.26
SCARB1-209ENST00000545305 GIPC1O14908 333 aa13.44□□□□□ -0.26
SCARB1-209ENST00000545305 SCAMP1O15126 338 aa13.44□□□□□ -0.26
SCARB1-209ENST00000545305 SIX3O95343 332 aaPredicted RBP13.44□□□□□ -0.26
SCARB1-209ENST00000545305 TGDSO95455 350 aa13.44□□□□□ -0.26
SCARB1-209ENST00000545305 RPS17P08708 135 aaKnown RBP13.44□□□□□ -0.26
SCARB1-209ENST00000545305 ACADLP28330 430 aa13.44□□□□□ -0.26
SCARB1-209ENST00000545305 HALP42357 657 aa13.44□□□□□ -0.26
SCARB1-209ENST00000545305 PIK3CGP48736 1102 aa13.44□□□□□ -0.26
SCARB1-209ENST00000545305 AGTR2P50052 363 aa13.44□□□□□ -0.26
SCARB1-209ENST00000545305 BLKP51451 505 aa13.44□□□□□ -0.26
SCARB1-209ENST00000545305 ILF3Q12906 894 aaKnown RBP eCLIP13.44□□□□□ -0.267e-7■□□□□ 9.7
SCARB1-209ENST00000545305 PCBP2Q15366 365 aaKnown RBP eCLIP13.44□□□□□ -0.266e-9■■□□□ 12.5
SCARB1-209ENST00000545305 RBBP7Q16576 425 aa13.44□□□□□ -0.26
SCARB1-209ENST00000545305 ARL13AQ5H913 290 aaPredicted RBP13.44□□□□□ -0.26
SCARB1-209ENST00000545305 METTL2BQ6P1Q9 378 aaKnown RBP13.44□□□□□ -0.26
SCARB1-209ENST00000545305 MBOAT1Q6ZNC8 495 aa13.44□□□□□ -0.26
SCARB1-209ENST00000545305 ARMCX6Q7L4S7 300 aa13.44□□□□□ -0.26
SCARB1-209ENST00000545305 WDR75Q8IWA0 830 aaKnown RBP13.44□□□□□ -0.26
SCARB1-209ENST00000545305 DCUN1D3Q8IWE4 304 aa13.44□□□□□ -0.26
SCARB1-209ENST00000545305 FBXL6Q8N531 539 aa13.44□□□□□ -0.26
SCARB1-209ENST00000545305 GAB3Q8WWW8 586 aa13.44□□□□□ -0.26
SCARB1-209ENST00000545305 TFGQ92734 400 aaPredicted RBP13.44□□□□□ -0.26
SCARB1-209ENST00000545305 RHBDF1Q96CC6 855 aa13.44□□□□□ -0.26
SCARB1-209ENST00000545305 FBXL8Q96CD0 374 aa13.44□□□□□ -0.26
SCARB1-209ENST00000545305 CCDC138Q96M89 665 aa13.44□□□□□ -0.26
SCARB1-209ENST00000545305 C1QTNF3Q9BXJ4 246 aa13.44□□□□□ -0.26
SCARB1-209ENST00000545305 GSTO2Q9H4Y5 243 aa13.44□□□□□ -0.26
SCARB1-209ENST00000545305 TM9SF3Q9HD45 589 aa13.44□□□□□ -0.26
SCARB1-209ENST00000545305 NPHS2Q9NP85 383 aa13.44□□□□□ -0.26
SCARB1-209ENST00000545305 ACSS2Q9NR19 701 aa13.44□□□□□ -0.26
SCARB1-209ENST00000545305 TRNAU1APQ9NX07 287 aaKnown RBP13.44□□□□□ -0.26
SCARB1-209ENST00000545305 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.44□□□□□ -0.26
SCARB1-209ENST00000545305 OPTCQ9UBM4 332 aa13.44□□□□□ -0.26
SCARB1-209ENST00000545305 PTBP2Q9UKA9 531 aaKnown RBP13.44□□□□□ -0.26
SCARB1-209ENST00000545305 PCTPQ9UKL6 214 aa13.44□□□□□ -0.26
SCARB1-209ENST00000545305 STK38LQ9Y2H1 464 aa13.44□□□□□ -0.26
SCARB1-209ENST00000545305 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.44□□□□□ -0.26
SCARB1-209ENST00000545305 ANGPTL3Q9Y5C1 460 aa13.44□□□□□ -0.26
SCARB1-209ENST00000545305 A0A1W2PR77 199 aa13.43□□□□□ -0.26
SCARB1-209ENST00000545305 LRRC14BA6NHZ5 514 aa13.43□□□□□ -0.26
SCARB1-209ENST00000545305 CCNT2O60583 730 aaKnown RBP13.43□□□□□ -0.26
SCARB1-209ENST00000545305 TRIOO75962 3097 aa13.43□□□□□ -0.26
SCARB1-209ENST00000545305 C1orf105O95561 183 aa13.43□□□□□ -0.26
SCARB1-209ENST00000545305 MLYCDO95822 493 aa13.43□□□□□ -0.26
SCARB1-209ENST00000545305 CHRNGP07510 517 aa13.43□□□□□ -0.26
SCARB1-209ENST00000545305 MPSTP25325 297 aa13.43□□□□□ -0.26
SCARB1-209ENST00000545305 MAOBP27338 520 aa13.43□□□□□ -0.26
SCARB1-209ENST00000545305 RPL10P27635 214 aaKnown RBP13.43□□□□□ -0.26
SCARB1-209ENST00000545305 ACTR1BP42025 376 aa13.43□□□□□ -0.26
SCARB1-209ENST00000545305 HSPA7P48741 367 aa13.43□□□□□ -0.26
SCARB1-209ENST00000545305 HK2P52789 917 aa13.43□□□□□ -0.26
SCARB1-209ENST00000545305 C21orf59P57076 290 aa13.43□□□□□ -0.26
SCARB1-209ENST00000545305 ACTR1AP61163 376 aa13.43□□□□□ -0.26
SCARB1-209ENST00000545305 CTBSQ01459 385 aa13.43□□□□□ -0.26
SCARB1-209ENST00000545305 CLCQ05315 142 aa13.43□□□□□ -0.26
SCARB1-209ENST00000545305 GALNT1Q10472 559 aaPredicted RBP13.43□□□□□ -0.26
SCARB1-209ENST00000545305 LCP2Q13094 533 aa13.43□□□□□ -0.26
SCARB1-209ENST00000545305 FZD2Q14332 565 aa13.43□□□□□ -0.26
SCARB1-209ENST00000545305 KRT33BQ14525 404 aa13.43□□□□□ -0.26
SCARB1-209ENST00000545305 TEAD4Q15561 434 aa13.43□□□□□ -0.26
SCARB1-209ENST00000545305 FBXO48Q5FWF7 155 aa13.43□□□□□ -0.26
SCARB1-209ENST00000545305 EEF1AKMT2Q5JPI9 291 aaKnown RBP13.43□□□□□ -0.26
SCARB1-209ENST00000545305 LYSMD4Q5XG99 296 aa13.43□□□□□ -0.26
SCARB1-209ENST00000545305 LRRC70Q7Z2Q7 622 aa13.43□□□□□ -0.26
SCARB1-209ENST00000545305 PHACTR4Q8IZ21 702 aa13.43□□□□□ -0.26
SCARB1-209ENST00000545305 PIWIL2Q8TC59 973 aaKnown RBP13.43□□□□□ -0.26
SCARB1-209ENST00000545305 ZNF483Q8TF39 744 aaPredicted RBP13.43□□□□□ -0.26
SCARB1-209ENST00000545305 DNASE2BQ8WZ79 361 aa13.43□□□□□ -0.26
SCARB1-209ENST00000545305 C12orf66Q96MD2 445 aa13.43□□□□□ -0.26
SCARB1-209ENST00000545305 SORT1Q99523 831 aa13.43□□□□□ -0.26
SCARB1-209ENST00000545305 SIKE1Q9BRV8 207 aa13.43□□□□□ -0.26
SCARB1-209ENST00000545305 TMEM79Q9BSE2 394 aa13.43□□□□□ -0.26
SCARB1-209ENST00000545305 GSDMCQ9BYG8 508 aa13.43□□□□□ -0.26
SCARB1-209ENST00000545305 ZDHHC5Q9C0B5 715 aa13.43□□□□□ -0.26
SCARB1-209ENST00000545305 C20orf27Q9GZN8 174 aa13.43□□□□□ -0.26
SCARB1-209ENST00000545305 TMEM168Q9H0V1 697 aa13.43□□□□□ -0.26
SCARB1-209ENST00000545305 TRIT1Q9H3H1 467 aaKnown RBP13.43□□□□□ -0.26
SCARB1-209ENST00000545305 ZNF395Q9H8N7 513 aaPredicted RBP13.43□□□□□ -0.26
SCARB1-209ENST00000545305 KLHL14Q9P2G3 628 aa13.43□□□□□ -0.26
SCARB1-209ENST00000545305 MARCOQ9UEW3 520 aaPredicted RBP13.43□□□□□ -0.26
SCARB1-209ENST00000545305 PLEKHM1Q9Y4G2 1056 aa13.43□□□□□ -0.26
SCARB1-209ENST00000545305 HEBP2Q9Y5Z4 205 aa13.43□□□□□ -0.26
SCARB1-209ENST00000545305 LRP4O75096 1905 aa13.43□□□□□ -0.26
SCARB1-209ENST00000545305 CEP192Q8TEP8 1941 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms