RNA–Protein interactions for RNA: ENST00000544989.1

HDAC4-216, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 342 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-216ENST00000544989 TUBB4BP68371 445 aa11.48□□□□□ -0.57
HDAC4-216ENST00000544989 CRADDP78560 199 aa11.48□□□□□ -0.57
HDAC4-216ENST00000544989 MC1RQ01726 317 aa11.48□□□□□ -0.57
HDAC4-216ENST00000544989 TUBB3Q13509 450 aa11.48□□□□□ -0.57
HDAC4-216ENST00000544989 TUBB2AQ13885 445 aa11.48□□□□□ -0.57
HDAC4-216ENST00000544989 TGIF1Q15583 401 aa11.48□□□□□ -0.57
HDAC4-216ENST00000544989 TAF1BQ53T94 588 aaPredicted RBP11.48□□□□□ -0.57
HDAC4-216ENST00000544989 PAPD7Q5XG87 772 aaKnown RBP11.48□□□□□ -0.57
HDAC4-216ENST00000544989 DUS1LQ6P1R4 473 aaKnown RBP11.48□□□□□ -0.57
HDAC4-216ENST00000544989 HOOK3Q86VS8 718 aa11.48□□□□□ -0.57
HDAC4-216ENST00000544989 RASGRP3Q8IV61 690 aa11.48□□□□□ -0.57
HDAC4-216ENST00000544989 SLC22A15Q8IZD6 547 aa11.48□□□□□ -0.57
HDAC4-216ENST00000544989 D2HGDHQ8N465 521 aa11.48□□□□□ -0.57
HDAC4-216ENST00000544989 OR52E1Q8NGJ3 308 aa11.48□□□□□ -0.57
HDAC4-216ENST00000544989 OR5K2Q8NHB8 316 aa11.48□□□□□ -0.57
HDAC4-216ENST00000544989 CALML6Q8TD86 181 aa11.48□□□□□ -0.57
HDAC4-216ENST00000544989 NAT14Q8WUY8 206 aa11.48□□□□□ -0.57
HDAC4-216ENST00000544989 OR6C1Q96RD1 312 aa11.48□□□□□ -0.57
HDAC4-216ENST00000544989 NAPGQ99747 312 aaPredicted RBP11.48□□□□□ -0.57
HDAC4-216ENST00000544989 MAP3K3Q99759 626 aa11.48□□□□□ -0.57
HDAC4-216ENST00000544989 TUBB2BQ9BVA1 445 aa11.48□□□□□ -0.57
HDAC4-216ENST00000544989 SPRY4Q9C004 299 aa11.48□□□□□ -0.57
HDAC4-216ENST00000544989 FAM117AQ9C073 453 aa11.48□□□□□ -0.57
HDAC4-216ENST00000544989 OR6C2Q9NZP2 312 aa11.48□□□□□ -0.57
HDAC4-216ENST00000544989 PCYOX1Q9UHG3 505 aa11.48□□□□□ -0.57
HDAC4-216ENST00000544989 POMT2Q9UKY4 750 aa11.48□□□□□ -0.57
HDAC4-216ENST00000544989 BTRCQ9Y297 605 aa11.48□□□□□ -0.57
HDAC4-216ENST00000544989 NEU2Q9Y3R4 380 aa11.48□□□□□ -0.57
HDAC4-216ENST00000544989 SAR1BQ9Y6B6 198 aa11.48□□□□□ -0.57
HDAC4-216ENST00000544989 PIEZO2Q9H5I5 2752 aa11.47□□□□□ -0.57
HDAC4-216ENST00000544989 IGHV5-51A0A0C4DH38 117 aa11.47□□□□□ -0.57
HDAC4-216ENST00000544989 TCRBV7S3A2A0A539 114 aa11.47□□□□□ -0.57
HDAC4-216ENST00000544989 GSAPA4D1B5 854 aa11.47□□□□□ -0.57
HDAC4-216ENST00000544989 GPC4O75487 556 aa11.47□□□□□ -0.57
HDAC4-216ENST00000544989 SLCO2B1O94956 709 aa11.47□□□□□ -0.57
HDAC4-216ENST00000544989 DLGAP3O95886 979 aa11.47□□□□□ -0.57
HDAC4-216ENST00000544989 ESR1P03372 595 aa11.47□□□□□ -0.57
HDAC4-216ENST00000544989 CCNYL3P0C7X3 344 aa11.47□□□□□ -0.57
HDAC4-216ENST00000544989 MSL3P1P0C860 447 aa11.47□□□□□ -0.57
HDAC4-216ENST00000544989 POLR2CP19387 275 aaPredicted RBP11.47□□□□□ -0.57
HDAC4-216ENST00000544989 CDH3P22223 829 aa11.47□□□□□ -0.57
HDAC4-216ENST00000544989 AOAHP28039 575 aa11.47□□□□□ -0.57
HDAC4-216ENST00000544989 PAFAH1B1P43034 410 aa11.47□□□□□ -0.57
HDAC4-216ENST00000544989 HSPA14Q0VDF9 509 aa11.47□□□□□ -0.57
HDAC4-216ENST00000544989 TYSND1Q2T9J0 566 aa11.47□□□□□ -0.57
HDAC4-216ENST00000544989 PLEKHS1Q5SXH7 462 aa11.47□□□□□ -0.57
HDAC4-216ENST00000544989 NEPROQ6NW34 567 aa11.47□□□□□ -0.57
HDAC4-216ENST00000544989 TTC23LQ6PF05 361 aa11.47□□□□□ -0.57
HDAC4-216ENST00000544989 C6orf15Q6UXA7 325 aaPredicted RBP11.47□□□□□ -0.57
HDAC4-216ENST00000544989 UNC5DQ6UXZ4 953 aa11.47□□□□□ -0.57
HDAC4-216ENST00000544989 OTOAQ7RTW8 1153 aa11.47□□□□□ -0.57
HDAC4-216ENST00000544989 CAND1Q86VP6 1230 aaKnown RBP11.47□□□□□ -0.57
HDAC4-216ENST00000544989 RAB42Q8N4Z0 105 aa11.47□□□□□ -0.57
HDAC4-216ENST00000544989 PMEPA1Q969W9 287 aa11.47□□□□□ -0.57
HDAC4-216ENST00000544989 MFSD3Q96ES6 412 aa11.47□□□□□ -0.57
HDAC4-216ENST00000544989 STAMBPL1Q96FJ0 436 aa11.47□□□□□ -0.57
HDAC4-216ENST00000544989 FOPNLQ96NB1 174 aa11.47□□□□□ -0.57
HDAC4-216ENST00000544989 CATSPER2Q96P56 530 aa11.47□□□□□ -0.57
HDAC4-216ENST00000544989 SERPINB12Q96P63 405 aa11.47□□□□□ -0.57
HDAC4-216ENST00000544989 CTRCQ99895 268 aa11.47□□□□□ -0.57
HDAC4-216ENST00000544989 NAT9Q9BTE0 207 aa11.47□□□□□ -0.57
HDAC4-216ENST00000544989 HGH1Q9BTY7 390 aa11.47□□□□□ -0.57
HDAC4-216ENST00000544989 RAB11FIP5Q9BXF6 653 aa11.47□□□□□ -0.57
HDAC4-216ENST00000544989 GPN2Q9H9Y4 310 aaPredicted RBP11.47□□□□□ -0.57
HDAC4-216ENST00000544989 LATS2Q9NRM7 1088 aa11.47□□□□□ -0.57
HDAC4-216ENST00000544989 INTS10Q9NVR2 710 aaKnown RBP11.47□□□□□ -0.57
HDAC4-216ENST00000544989 SOHLH2Q9NX45 425 aa11.47□□□□□ -0.57
HDAC4-216ENST00000544989 ASIC3Q9UHC3 531 aa11.47□□□□□ -0.57
HDAC4-216ENST00000544989 PCDHGA4Q9Y5G9 962 aa11.47□□□□□ -0.57
HDAC4-216ENST00000544989 SDK2Q58EX2 2172 aa11.47□□□□□ -0.57
HDAC4-216ENST00000544989 COL12A1Q99715 3063 aa11.46□□□□□ -0.57
HDAC4-216ENST00000544989 ZNF891A8MT65 544 aaPredicted RBP11.46□□□□□ -0.57
HDAC4-216ENST00000544989 BHMG1C9JSJ3 638 aaPredicted RBP11.46□□□□□ -0.57
HDAC4-216ENST00000544989 CCDC188H7C350 402 aa11.46□□□□□ -0.57
HDAC4-216ENST00000544989 SPAG6O75602 509 aa11.46□□□□□ -0.57
HDAC4-216ENST00000544989 USP1O94782 785 aa11.46□□□□□ -0.57
HDAC4-216ENST00000544989 ZIC2O95409 532 aaPredicted RBP11.46□□□□□ -0.57
HDAC4-216ENST00000544989 TTC4O95801 387 aa11.46□□□□□ -0.57
HDAC4-216ENST00000544989 SFTPCP11686 197 aa11.46□□□□□ -0.57
HDAC4-216ENST00000544989 ATP5DP30049 168 aa11.46□□□□□ -0.57
HDAC4-216ENST00000544989 CCR7P32248 378 aa11.46□□□□□ -0.57
HDAC4-216ENST00000544989 CCNFP41002 786 aa11.46□□□□□ -0.57
HDAC4-216ENST00000544989 MAGEA3P43357 314 aa11.46□□□□□ -0.57
HDAC4-216ENST00000544989 ARCN1P48444 511 aaKnown RBP11.46□□□□□ -0.57
HDAC4-216ENST00000544989 KPNA2P52292 529 aaKnown RBP11.46□□□□□ -0.57
HDAC4-216ENST00000544989 SH3BP2P78314 561 aa11.46□□□□□ -0.57
HDAC4-216ENST00000544989 THOC5Q13769 683 aaKnown RBP11.46□□□□□ -0.57
HDAC4-216ENST00000544989 PTK6Q13882 451 aa11.46□□□□□ -0.57
HDAC4-216ENST00000544989 DHX34Q14147 1143 aaKnown RBP11.46□□□□□ -0.57
HDAC4-216ENST00000544989 SEMA3AQ14563 771 aa11.46□□□□□ -0.57
HDAC4-216ENST00000544989 BRD3Q15059 726 aa11.46□□□□□ -0.57
HDAC4-216ENST00000544989 ANKRD20A4Q4UJ75 823 aa11.46□□□□□ -0.57
HDAC4-216ENST00000544989 CRTC2Q53ET0 693 aaPredicted RBP11.46□□□□□ -0.57
HDAC4-216ENST00000544989 ANKRD22Q5VYY1 191 aa11.46□□□□□ -0.57
HDAC4-216ENST00000544989 TMEM135Q86UB9 458 aa11.46□□□□□ -0.57
HDAC4-216ENST00000544989 VASH2Q86V25 355 aa11.46□□□□□ -0.57
HDAC4-216ENST00000544989 CILP2Q8IUL8 1156 aa11.46□□□□□ -0.57
HDAC4-216ENST00000544989 DCUN1D3Q8IWE4 304 aa11.46□□□□□ -0.57
HDAC4-216ENST00000544989 NAT8LQ8N9F0 302 aa11.46□□□□□ -0.57
HDAC4-216ENST00000544989 PHC3Q8NDX5 983 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms