RNA–Protein interactions for RNA: ENST00000544909.5

PAAF1-215, Transcript of proteasomal ATPase associated factor 1, humanhuman

TSL 1 (best) BASIC

Gene PAAF1, Length 1,802 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1-215ENST00000544909 GMPR2Q9P2T1 348 aaKnown RBP12.21□□□□□ -0.45
PAAF1-215ENST00000544909 NFKBIL1Q9UBC1 381 aaPredicted RBP12.21□□□□□ -0.45
PAAF1-215ENST00000544909 BLOC1S6Q9UL45 172 aa12.21□□□□□ -0.45
PAAF1-215ENST00000544909 SNX6Q9UNH7 406 aa12.21□□□□□ -0.45
PAAF1-215ENST00000544909 MAPRE3Q9UPY8 281 aa12.21□□□□□ -0.45
PAAF1-215ENST00000544909 PCDHGA11Q9Y5H2 935 aa12.21□□□□□ -0.45
PAAF1-215ENST00000544909 GMEB1Q9Y692 573 aa12.21□□□□□ -0.45
PAAF1-215ENST00000544909 ELOVL7A1L3X0 281 aa12.21□□□□□ -0.46
PAAF1-215ENST00000544909 C9JVG2 144 aa12.21□□□□□ -0.46
PAAF1-215ENST00000544909 UPK1AO00322 258 aa12.21□□□□□ -0.46
PAAF1-215ENST00000544909 QSOX1O00391 747 aa12.21□□□□□ -0.46
PAAF1-215ENST00000544909 MANBAO00462 879 aa12.21□□□□□ -0.46
PAAF1-215ENST00000544909 TPST1O60507 370 aa12.21□□□□□ -0.46
PAAF1-215ENST00000544909 RECQL5O94762 991 aaPredicted RBP12.21□□□□□ -0.46
PAAF1-215ENST00000544909 GNAO1P09471 354 aa12.21□□□□□ -0.46
PAAF1-215ENST00000544909 IRF1P10914 325 aa12.21□□□□□ -0.46
PAAF1-215ENST00000544909 SLC2A4P14672 509 aa12.21□□□□□ -0.46
PAAF1-215ENST00000544909 RPL17P18621 184 aaKnown RBP12.21□□□□□ -0.46
PAAF1-215ENST00000544909 LAG3P18627 525 aa12.21□□□□□ -0.46
PAAF1-215ENST00000544909 NFKBIAP25963 317 aa12.21□□□□□ -0.46
PAAF1-215ENST00000544909 ARL1P40616 181 aaPredicted RBP12.21□□□□□ -0.46
PAAF1-215ENST00000544909 HSPA7P48741 367 aa12.21□□□□□ -0.46
PAAF1-215ENST00000544909 APLP1P51693 650 aa12.21□□□□□ -0.46
PAAF1-215ENST00000544909 CLDN8P56748 225 aa12.21□□□□□ -0.46
PAAF1-215ENST00000544909 C21orf58P58505 322 aa12.21□□□□□ -0.46
PAAF1-215ENST00000544909 GABARAPL2P60520 117 aa12.21□□□□□ -0.46
PAAF1-215ENST00000544909 RPL38P63173 70 aaKnown RBP12.21□□□□□ -0.46
PAAF1-215ENST00000544909 CYP4F3Q08477 520 aa12.21□□□□□ -0.46
PAAF1-215ENST00000544909 PLEKHG6Q3KR16 790 aa12.21□□□□□ -0.46
PAAF1-215ENST00000544909 ATXN7L2Q5T6C5 722 aaPredicted RBP12.21□□□□□ -0.46
PAAF1-215ENST00000544909 GPR149Q86SP6 731 aa12.21□□□□□ -0.46
PAAF1-215ENST00000544909 DDX53Q86TM3 631 aaKnown RBP12.21□□□□□ -0.46
PAAF1-215ENST00000544909 GPR180Q86V85 440 aa12.21□□□□□ -0.46
PAAF1-215ENST00000544909 PGBD3Q8N328 593 aa12.21□□□□□ -0.46
PAAF1-215ENST00000544909 L3MBTL4Q8NA19 623 aa12.21□□□□□ -0.46
PAAF1-215ENST00000544909 STARD8Q92502 1023 aa12.21□□□□□ -0.46
PAAF1-215ENST00000544909 NRBF2Q96F24 287 aa12.21□□□□□ -0.46
PAAF1-215ENST00000544909 RNF145Q96MT1 663 aa12.21□□□□□ -0.46
PAAF1-215ENST00000544909 TOX2Q96NM4 488 aa12.21□□□□□ -0.46
PAAF1-215ENST00000544909 CDK15Q96Q40 435 aa12.21□□□□□ -0.46
PAAF1-215ENST00000544909 COPS8Q99627 209 aa12.21□□□□□ -0.46
PAAF1-215ENST00000544909 SLC12A9Q9BXP2 914 aa12.21□□□□□ -0.46
PAAF1-215ENST00000544909 KCNH6Q9H252 994 aa12.21□□□□□ -0.46
PAAF1-215ENST00000544909 IL21Q9HBE4 155 aa12.21□□□□□ -0.46
PAAF1-215ENST00000544909 SLAMF8Q9P0V8 285 aa12.21□□□□□ -0.46
PAAF1-215ENST00000544909 ZNHIT2Q9UHR6 403 aa12.21□□□□□ -0.46
PAAF1-215ENST00000544909 ZFC3H1O60293 1989 aaKnown RBP12.2□□□□□ -0.46
PAAF1-215ENST00000544909 A0A096LPI6 279 aa12.2□□□□□ -0.46
PAAF1-215ENST00000544909 FAM149AA5PLN7 773 aa12.2□□□□□ -0.46
PAAF1-215ENST00000544909 C16orf96A6NNT2 1141 aa12.2□□□□□ -0.46
PAAF1-215ENST00000544909 IQCF5A8MTL0 148 aa12.2□□□□□ -0.46
PAAF1-215ENST00000544909 PLOD2O00469 737 aa12.2□□□□□ -0.46
PAAF1-215ENST00000544909 PRAMEF12O95522 483 aa12.2□□□□□ -0.46
PAAF1-215ENST00000544909 OR56A5P0C7T3 313 aa12.2□□□□□ -0.46
PAAF1-215ENST00000544909 THRBP10828 461 aa12.2□□□□□ -0.46
PAAF1-215ENST00000544909 HNF1BP35680 557 aa12.2□□□□□ -0.46
PAAF1-215ENST00000544909 PPM1AP35813 382 aa12.2□□□□□ -0.46
PAAF1-215ENST00000544909 CASP2P42575 452 aa12.2□□□□□ -0.46
PAAF1-215ENST00000544909 IMPG1Q17R60 797 aa12.2□□□□□ -0.46
PAAF1-215ENST00000544909 FUT11Q495W5 492 aa12.2□□□□□ -0.46
PAAF1-215ENST00000544909 LRRC23Q53EV4 343 aaPredicted RBP12.2□□□□□ -0.46
PAAF1-215ENST00000544909 RUNDC3AQ59EK9 446 aa12.2□□□□□ -0.46
PAAF1-215ENST00000544909 FBXO48Q5FWF7 155 aa12.2□□□□□ -0.46
PAAF1-215ENST00000544909 PLEKHS1Q5SXH7 462 aa12.2□□□□□ -0.46
PAAF1-215ENST00000544909 CNKSR3Q6P9H4 555 aa12.2□□□□□ -0.46
PAAF1-215ENST00000544909 ZNF773Q6PK81 442 aa12.2□□□□□ -0.46
PAAF1-215ENST00000544909 NECAB2Q7Z6G3 386 aa12.2□□□□□ -0.46
PAAF1-215ENST00000544909 ADHFE1Q8IWW8 467 aa12.2□□□□□ -0.46
PAAF1-215ENST00000544909 CD99L2Q8TCZ2 262 aa12.2□□□□□ -0.46
PAAF1-215ENST00000544909 CSGALNACT1Q8TDX6 532 aa12.2□□□□□ -0.46
PAAF1-215ENST00000544909 CYGBQ8WWM9 190 aa12.2□□□□□ -0.46
PAAF1-215ENST00000544909 GAB3Q8WWW8 586 aa12.2□□□□□ -0.46
PAAF1-215ENST00000544909 MRPS31Q92665 395 aaKnown RBP12.2□□□□□ -0.46
PAAF1-215ENST00000544909 ESAMQ96AP7 390 aa12.2□□□□□ -0.46
PAAF1-215ENST00000544909 ISOC1Q96CN7 298 aa12.2□□□□□ -0.46
PAAF1-215ENST00000544909 PPM1MQ96MI6 270 aa12.2□□□□□ -0.46
PAAF1-215ENST00000544909 RBM4BQ9BQ04 359 aaKnown RBP12.2□□□□□ -0.46
PAAF1-215ENST00000544909 RBM4Q9BWF3 364 aaKnown RBP12.2□□□□□ -0.46
PAAF1-215ENST00000544909 NTN4Q9HB63 628 aa12.2□□□□□ -0.46
PAAF1-215ENST00000544909 HPS4Q9NQG7 708 aa12.2□□□□□ -0.46
PAAF1-215ENST00000544909 RAD18Q9NS91 495 aa12.2□□□□□ -0.46
PAAF1-215ENST00000544909 ELOVL2Q9NXB9 296 aa12.2□□□□□ -0.46
PAAF1-215ENST00000544909 VAPAQ9P0L0 249 aa12.2□□□□□ -0.46
PAAF1-215ENST00000544909 CPQQ9Y646 472 aa12.2□□□□□ -0.46
PAAF1-215ENST00000544909 TET1Q8NFU7 2136 aa12.19□□□□□ -0.46
PAAF1-215ENST00000544909 MYOCOSA0A1B0GUC4 107 aa12.19□□□□□ -0.46
PAAF1-215ENST00000544909 AP2A2O94973 939 aa12.19□□□□□ -0.46
PAAF1-215ENST00000544909 CNPP09543 421 aaKnown RBP12.19□□□□□ -0.46
PAAF1-215ENST00000544909 ALPIP09923 528 aa12.19□□□□□ -0.46
PAAF1-215ENST00000544909 CDK4P11802 303 aa12.19□□□□□ -0.46
PAAF1-215ENST00000544909 ZNF30P17039 623 aa12.19□□□□□ -0.46
PAAF1-215ENST00000544909 UGT1A6P19224 532 aa12.19□□□□□ -0.46
PAAF1-215ENST00000544909 DCDC1P59894 354 aa12.19□□□□□ -0.46
PAAF1-215ENST00000544909 YBX1P67809 324 aaKnown RBP12.19□□□□□ -0.46
PAAF1-215ENST00000544909 HPCAP84074 193 aa12.19□□□□□ -0.46
PAAF1-215ENST00000544909 PCDH1Q08174 1060 aa12.19□□□□□ -0.46
PAAF1-215ENST00000544909 TOP3AQ13472 1001 aaPredicted RBP12.19□□□□□ -0.46
PAAF1-215ENST00000544909 PHKG1Q16816 387 aa12.19□□□□□ -0.46
PAAF1-215ENST00000544909 FAM174BQ3ZCQ3 159 aa12.19□□□□□ -0.46
PAAF1-215ENST00000544909 USP39Q53GS9 565 aaKnown RBP12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms