RNA–Protein interactions for RNA: ENST00000544550.5

SNHG1-220, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 636 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-220ENST00000544550 UBA2Q9UBT2 640 aaPredicted RBP4□□□□□ -1.77
SNHG1-220ENST00000544550 EPHA6Q9UF33 1036 aa4□□□□□ -1.77
SNHG1-220ENST00000544550 DNAI1Q9UI46 699 aa4□□□□□ -1.77
SNHG1-220ENST00000544550 CNTN6Q9UQ52 1028 aa4□□□□□ -1.77
SNHG1-220ENST00000544550 NEU2Q9Y3R4 380 aa4□□□□□ -1.77
SNHG1-220ENST00000544550 SPO11Q9Y5K1 396 aa4□□□□□ -1.77
SNHG1-220ENST00000544550 SNX10Q9Y5X0 201 aa4□□□□□ -1.77
SNHG1-220ENST00000544550 ATP23Q9Y6H3 246 aa4□□□□□ -1.77
SNHG1-220ENST00000544550 NF1P21359 2839 aa4□□□□□ -1.77
SNHG1-220ENST00000544550 CELSR2Q9HCU4 2923 aa4□□□□□ -1.77
SNHG1-220ENST00000544550 TDRD6O60522 2096 aaKnown RBP3.99□□□□□ -1.77
SNHG1-220ENST00000544550 A0A0U1RQS6 177 aa3.99□□□□□ -1.77
SNHG1-220ENST00000544550 FAM90A27PA6NNH2 459 aa3.99□□□□□ -1.77
SNHG1-220ENST00000544550 FAM171A2A8MVW0 826 aa3.99□□□□□ -1.77
SNHG1-220ENST00000544550 FOXO6A8MYZ6 492 aa3.99□□□□□ -1.77
SNHG1-220ENST00000544550 C9J4A7 227 aa3.99□□□□□ -1.77
SNHG1-220ENST00000544550 I6L893 689 aaPredicted RBP3.99□□□□□ -1.77
SNHG1-220ENST00000544550 MASP2O00187 686 aa3.99□□□□□ -1.77
SNHG1-220ENST00000544550 CCL21O00585 134 aa3.99□□□□□ -1.77
SNHG1-220ENST00000544550 SCDO00767 359 aa3.99□□□□□ -1.77
SNHG1-220ENST00000544550 PCDH17O14917 1159 aa3.99□□□□□ -1.77
SNHG1-220ENST00000544550 INSIG1O15503 277 aa3.99□□□□□ -1.77
SNHG1-220ENST00000544550 CREB3O43889 395 aa3.99□□□□□ -1.77
SNHG1-220ENST00000544550 ULK1O75385 1050 aa3.99□□□□□ -1.77
SNHG1-220ENST00000544550 CLDN14O95500 239 aa3.99□□□□□ -1.77
SNHG1-220ENST00000544550 VIPP01282 170 aa3.99□□□□□ -1.77
SNHG1-220ENST00000544550 CYP2A6P11509 494 aaPredicted RBP3.99□□□□□ -1.77
SNHG1-220ENST00000544550 KRT5P13647 590 aa3.99□□□□□ -1.77
SNHG1-220ENST00000544550 GM2AP17900 193 aa3.99□□□□□ -1.77
SNHG1-220ENST00000544550 HNRNPH3P31942 346 aaKnown RBP3.99□□□□□ -1.77
SNHG1-220ENST00000544550 CA7P43166 264 aa3.99□□□□□ -1.77
SNHG1-220ENST00000544550 GPR1P46091 355 aa3.99□□□□□ -1.77
SNHG1-220ENST00000544550 POLD2P49005 469 aa3.99□□□□□ -1.77
SNHG1-220ENST00000544550 FMO5P49326 533 aa3.99□□□□□ -1.77
SNHG1-220ENST00000544550 SOX8P57073 446 aa3.99□□□□□ -1.77
SNHG1-220ENST00000544550 YBX1P67809 324 aaKnown RBP3.99□□□□□ -1.77
SNHG1-220ENST00000544550 TUBB4BP68371 445 aa3.99□□□□□ -1.77
SNHG1-220ENST00000544550 PHC1P78364 1004 aa3.99□□□□□ -1.77
SNHG1-220ENST00000544550 FOLH1Q04609 750 aa3.99□□□□□ -1.77
SNHG1-220ENST00000544550 LTBQ06643 244 aa3.99□□□□□ -1.77
SNHG1-220ENST00000544550 DPTQ07507 201 aa3.99□□□□□ -1.77
SNHG1-220ENST00000544550 FAPQ12884 760 aa3.99□□□□□ -1.77
SNHG1-220ENST00000544550 AIMP2Q13155 320 aaKnown RBP3.99□□□□□ -1.77
SNHG1-220ENST00000544550 ATP1A4Q13733 1029 aa3.99□□□□□ -1.77
SNHG1-220ENST00000544550 TUBB2AQ13885 445 aa3.99□□□□□ -1.77
SNHG1-220ENST00000544550 SSPNQ14714 243 aa3.99□□□□□ -1.77
SNHG1-220ENST00000544550 SLC9A5Q14940 896 aa3.99□□□□□ -1.77
SNHG1-220ENST00000544550 INAQ16352 499 aa3.99□□□□□ -1.77
SNHG1-220ENST00000544550 PARP15Q460N3 678 aa3.99□□□□□ -1.77
SNHG1-220ENST00000544550 ANO6Q4KMQ2 910 aa3.99□□□□□ -1.77
SNHG1-220ENST00000544550 ZCWPW2Q504Y3 356 aa3.99□□□□□ -1.77
SNHG1-220ENST00000544550 DCAF10Q5QP82 559 aa3.99□□□□□ -1.77
SNHG1-220ENST00000544550 TMTC4Q5T4D3 741 aa3.99□□□□□ -1.77
SNHG1-220ENST00000544550 OTUD1Q5VV17 481 aaPredicted RBP3.99□□□□□ -1.77
SNHG1-220ENST00000544550 IRGCQ6NXR0 463 aa3.99□□□□□ -1.77
SNHG1-220ENST00000544550 RPUSD3Q6P087 351 aaKnown RBP3.99□□□□□ -1.77
SNHG1-220ENST00000544550 FAM173BQ6P4H8 233 aa3.99□□□□□ -1.77
SNHG1-220ENST00000544550 KLHL35Q6PF15 583 aa3.99□□□□□ -1.77
SNHG1-220ENST00000544550 DOK6Q6PKX4 331 aa3.99□□□□□ -1.77
SNHG1-220ENST00000544550 SHC4Q6S5L8 630 aa3.99□□□□□ -1.77
SNHG1-220ENST00000544550 TMEM207Q6UWW9 146 aa3.99□□□□□ -1.77
SNHG1-220ENST00000544550 GFRALQ6UXV0 394 aa3.99□□□□□ -1.77
SNHG1-220ENST00000544550 LEKR1Q6ZMV7 388 aa3.99□□□□□ -1.77
SNHG1-220ENST00000544550 TMEM26Q6ZUK4 368 aa3.99□□□□□ -1.77
SNHG1-220ENST00000544550 ENOSF1Q7L5Y1 443 aa3.99□□□□□ -1.77
SNHG1-220ENST00000544550 MILR1Q7Z6M3 343 aa3.99□□□□□ -1.77
SNHG1-220ENST00000544550 CAMK1DQ8IU85 385 aa3.99□□□□□ -1.77
SNHG1-220ENST00000544550 DSELQ8IZU8 1212 aa3.99□□□□□ -1.77
SNHG1-220ENST00000544550 ZBTB2Q8N680 514 aa3.99□□□□□ -1.77
SNHG1-220ENST00000544550 DNAJB14Q8TBM8 379 aa3.99□□□□□ -1.77
SNHG1-220ENST00000544550 TEKT4Q8WW24 435 aa3.99□□□□□ -1.77
SNHG1-220ENST00000544550 CPT1BQ92523 772 aa3.99□□□□□ -1.77
SNHG1-220ENST00000544550 SLC35C1Q96A29 364 aa3.99□□□□□ -1.77
SNHG1-220ENST00000544550 ECHDC3Q96DC8 303 aa3.99□□□□□ -1.77
SNHG1-220ENST00000544550 TBC1D31Q96DN5 1066 aa3.99□□□□□ -1.77
SNHG1-220ENST00000544550 RNF31Q96EP0 1072 aa3.99□□□□□ -1.77
SNHG1-220ENST00000544550 DTD2Q96FN9 168 aa3.99□□□□□ -1.77
SNHG1-220ENST00000544550 PAGE5Q96GU1 130 aa3.99□□□□□ -1.77
SNHG1-220ENST00000544550 SLC41A2Q96JW4 573 aa3.99□□□□□ -1.77
SNHG1-220ENST00000544550 ZNF514Q96K75 400 aaPredicted RBP3.99□□□□□ -1.77
SNHG1-220ENST00000544550 CPXM1Q96SM3 734 aa3.99□□□□□ -1.77
SNHG1-220ENST00000544550 TSG101Q99816 390 aa3.99□□□□□ -1.77
SNHG1-220ENST00000544550 TUBB2BQ9BVA1 445 aa3.99□□□□□ -1.77
SNHG1-220ENST00000544550 CHST8Q9H2A9 424 aa3.99□□□□□ -1.77
SNHG1-220ENST00000544550 EPS8L2Q9H6S3 715 aa3.99□□□□□ -1.77
SNHG1-220ENST00000544550 ANLNQ9NQW6 1124 aa3.99□□□□□ -1.77
SNHG1-220ENST00000544550 KCND1Q9NSA2 647 aa3.99□□□□□ -1.77
SNHG1-220ENST00000544550 VPS18Q9P253 973 aa3.99□□□□□ -1.77
SNHG1-220ENST00000544550 SEMA5BQ9P283 1151 aa3.99□□□□□ -1.77
SNHG1-220ENST00000544550 KLHL14Q9P2G3 628 aa3.99□□□□□ -1.77
SNHG1-220ENST00000544550 LHX3Q9UBR4 397 aa3.99□□□□□ -1.77
SNHG1-220ENST00000544550 TBC1D29Q9UFV1 150 aa3.99□□□□□ -1.77
SNHG1-220ENST00000544550 OR12D3Q9UGF7 316 aa3.99□□□□□ -1.77
SNHG1-220ENST00000544550 ARMCX3Q9UH62 379 aaPredicted RBP3.99□□□□□ -1.77
SNHG1-220ENST00000544550 EDARQ9UNE0 448 aa3.99□□□□□ -1.77
SNHG1-220ENST00000544550 PCDHGB6Q9Y5F9 930 aa3.99□□□□□ -1.77
SNHG1-220ENST00000544550 SLC30A1Q9Y6M5 507 aa3.99□□□□□ -1.77
SNHG1-220ENST00000544550 CROCCQ5TZA2 2017 aa3.99□□□□□ -1.77
SNHG1-220ENST00000544550 TRPM6Q9BX84 2022 aa3.99□□□□□ -1.77
SNHG1-220ENST00000544550 LRP4O75096 1905 aa3.98□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms