RNA–Protein interactions for RNA: ENST00000543789.6

CDKN3-207, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 5 BASIC

Gene CDKN3, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-207ENST00000543789 C19orf43Q9BQ61 176 aa21.9■■□□□ 1.1
CDKN3-207ENST00000543789 XKR8Q9H6D3 395 aa21.9■■□□□ 1.1
CDKN3-207ENST00000543789 ZDHHC3Q9NYG2 299 aa21.9■■□□□ 1.1
CDKN3-207ENST00000543789 ESPL1Q14674 2120 aa21.89■■□□□ 1.1
CDKN3-207ENST00000543789 APOC4-APOC2K7ER74 178 aa21.89■■□□□ 1.09
CDKN3-207ENST00000543789 APOC2P02655 101 aa21.89■■□□□ 1.09
CDKN3-207ENST00000543789 PDHA2P29803 388 aa21.89■■□□□ 1.09
CDKN3-207ENST00000543789 ZNF140P52738 457 aaPredicted RBP21.89■■□□□ 1.09
CDKN3-207ENST00000543789 RPA4Q13156 261 aa21.89■■□□□ 1.09
CDKN3-207ENST00000543789 GPR33Q49SQ1 333 aa21.89■■□□□ 1.09
CDKN3-207ENST00000543789 ZNF658BQ4V348 819 aaPredicted RBP21.89■■□□□ 1.09
CDKN3-207ENST00000543789 CCDC181Q5TID7 509 aa21.89■■□□□ 1.09
CDKN3-207ENST00000543789 HOOK3Q86VS8 718 aa21.89■■□□□ 1.09
CDKN3-207ENST00000543789 VSTM4Q8IW00 320 aa21.89■■□□□ 1.09
CDKN3-207ENST00000543789 IQCKQ8N0W5 287 aa21.89■■□□□ 1.09
CDKN3-207ENST00000543789 B3GNT3Q9Y2A9 372 aa21.89■■□□□ 1.09
CDKN3-207ENST00000543789 AP1M2Q9Y6Q5 423 aa21.89■■□□□ 1.09
CDKN3-207ENST00000543789 WIPF3A6NGB9 483 aa21.88■■□□□ 1.09
CDKN3-207ENST00000543789 LDB2O43679 373 aa21.88■■□□□ 1.09
CDKN3-207ENST00000543789 CBX6O95503 412 aa21.88■■□□□ 1.09
CDKN3-207ENST00000543789 PSMB4P28070 264 aa21.88■■□□□ 1.09
CDKN3-207ENST00000543789 MARCKSL1P49006 195 aa21.88■■□□□ 1.09
CDKN3-207ENST00000543789 NR6A1Q15406 480 aa21.88■■□□□ 1.09
CDKN3-207ENST00000543789 ANKRD20A2Q5SQ80 823 aa21.88■■□□□ 1.09
CDKN3-207ENST00000543789 ANKRD20A1Q5TYW2 823 aa21.88■■□□□ 1.09
CDKN3-207ENST00000543789 ANKRD20A3Q5VUR7 823 aa21.88■■□□□ 1.09
CDKN3-207ENST00000543789 SPESP1Q6UW49 350 aa21.88■■□□□ 1.09
CDKN3-207ENST00000543789 MAMDC2Q7Z304 686 aaPredicted RBP21.88■■□□□ 1.09
CDKN3-207ENST00000543789 MRGPREQ86SM8 312 aa21.88■■□□□ 1.09
CDKN3-207ENST00000543789 CISD2Q8N5K1 135 aaKnown RBP21.88■■□□□ 1.09
CDKN3-207ENST00000543789 CLEC1AQ8NC01 280 aa21.88■■□□□ 1.09
CDKN3-207ENST00000543789 TBRG4Q969Z0 631 aaKnown RBP eCLIP21.88■■□□□ 1.09
CDKN3-207ENST00000543789 TCTN2Q96GX1 697 aa21.88■■□□□ 1.09
CDKN3-207ENST00000543789 HGH1Q9BTY7 390 aa21.88■■□□□ 1.09
CDKN3-207ENST00000543789 ASF1BQ9NVP2 202 aa21.88■■□□□ 1.09
CDKN3-207ENST00000543789 GPN3Q9UHW5 284 aaPredicted RBP21.88■■□□□ 1.09
CDKN3-207ENST00000543789 ERRFI1Q9UJM3 462 aaPredicted RBP21.88■■□□□ 1.09
CDKN3-207ENST00000543789 IGLV3-16A0A075B6K0 115 aa21.87■■□□□ 1.09
CDKN3-207ENST00000543789 PEX12O00623 359 aa21.87■■□□□ 1.09
CDKN3-207ENST00000543789 KLHL41O60662 606 aa21.87■■□□□ 1.09
CDKN3-207ENST00000543789 OR2B3O76000 313 aa21.87■■□□□ 1.09
CDKN3-207ENST00000543789 IGHEP01854 428 aa21.87■■□□□ 1.09
CDKN3-207ENST00000543789 ALPPP05187 535 aa21.87■■□□□ 1.09
CDKN3-207ENST00000543789 CD63P08962 238 aa21.87■■□□□ 1.09
CDKN3-207ENST00000543789 CBSLP0DN79 551 aa21.87■■□□□ 1.09
CDKN3-207ENST00000543789 MC4RP32245 332 aa21.87■■□□□ 1.09
CDKN3-207ENST00000543789 CBSP35520 551 aa21.87■■□□□ 1.09
CDKN3-207ENST00000543789 MAGEA1P43355 309 aa21.87■■□□□ 1.09
CDKN3-207ENST00000543789 CDKN1CP49918 316 aaPredicted RBP21.87■■□□□ 1.09
CDKN3-207ENST00000543789 BOP1Q14137 746 aaKnown RBP21.87■■□□□ 1.09
CDKN3-207ENST00000543789 FAM60AQ9NP50 221 aa21.87■■□□□ 1.09
CDKN3-207ENST00000543789 FEZ2Q9UHY8 353 aaPredicted RBP21.87■■□□□ 1.09
CDKN3-207ENST00000543789 PTRH2Q9Y3E5 179 aaKnown RBP21.87■■□□□ 1.09
CDKN3-207ENST00000543789 SHANK1Q9Y566 2161 aa21.87■■□□□ 1.09
CDKN3-207ENST00000543789 CCL22O00626 93 aa21.86■■□□□ 1.09
CDKN3-207ENST00000543789 STK10O94804 968 aaKnown RBP21.86■■□□□ 1.09
CDKN3-207ENST00000543789 ACRV1P26436 265 aa21.86■■□□□ 1.09
CDKN3-207ENST00000543789 COL8A1P27658 744 aa21.86■■□□□ 1.09
CDKN3-207ENST00000543789 DCDP81605 110 aaKnown RBP21.86■■□□□ 1.09
CDKN3-207ENST00000543789 MYBPC3Q14896 1274 aa21.86■■□□□ 1.09
CDKN3-207ENST00000543789 ZRANB3Q5FWF4 1079 aa21.86■■□□□ 1.09
CDKN3-207ENST00000543789 DCAF10Q5QP82 559 aa21.86■■□□□ 1.09
CDKN3-207ENST00000543789 C1orf189Q5VU69 101 aa21.86■■□□□ 1.09
CDKN3-207ENST00000543789 LYPLAL1Q5VWZ2 237 aa21.86■■□□□ 1.09
CDKN3-207ENST00000543789 DENND5AQ6IQ26 1287 aa21.86■■□□□ 1.09
CDKN3-207ENST00000543789 RHBDD2Q6NTF9 364 aa21.86■■□□□ 1.09
CDKN3-207ENST00000543789 IGFL3Q6UXB1 125 aa21.86■■□□□ 1.09
CDKN3-207ENST00000543789 TAS2R42Q7RTR8 314 aa21.86■■□□□ 1.09
CDKN3-207ENST00000543789 SERPINA9Q86WD7 417 aa21.86■■□□□ 1.09
CDKN3-207ENST00000543789 CDKL3Q8IVW4 592 aaPredicted RBP21.86■■□□□ 1.09
CDKN3-207ENST00000543789 GALNT16Q8N428 558 aa21.86■■□□□ 1.09
CDKN3-207ENST00000543789 C19orf47Q8N9M1 422 aaKnown RBP21.86■■□□□ 1.09
CDKN3-207ENST00000543789 ACTL9Q8TC94 416 aa21.86■■□□□ 1.09
CDKN3-207ENST00000543789 KRT35Q92764 455 aa21.86■■□□□ 1.09
CDKN3-207ENST00000543789 TBL1YQ9BQ87 522 aa21.86■■□□□ 1.09
CDKN3-207ENST00000543789 SPRTNQ9H040 489 aaPredicted RBP21.86■■□□□ 1.09
CDKN3-207ENST00000543789 ARNT2Q9HBZ2 717 aa21.86■■□□□ 1.09
CDKN3-207ENST00000543789 TRBV5-4A0A0C4DH59 114 aa21.85■■□□□ 1.09
CDKN3-207ENST00000543789 H3BMH7 237 aa21.85■■□□□ 1.09
CDKN3-207ENST00000543789 KCNN4O15554 427 aa21.85■■□□□ 1.09
CDKN3-207ENST00000543789 CLDN1O95832 211 aa21.85■■□□□ 1.09
CDKN3-207ENST00000543789 LDLRP01130 860 aa21.85■■□□□ 1.09
CDKN3-207ENST00000543789 GSTM1P09488 218 aa21.85■■□□□ 1.09
CDKN3-207ENST00000543789 FOLR3P41439 243 aa21.85■■□□□ 1.09
CDKN3-207ENST00000543789 COPS2P61201 443 aa21.85■■□□□ 1.09
CDKN3-207ENST00000543789 OTUD4Q01804 1114 aaKnown RBP21.85■■□□□ 1.09
CDKN3-207ENST00000543789 GSTM4Q03013 218 aa21.85■■□□□ 1.09
CDKN3-207ENST00000543789 SPARCL1Q14515 664 aa21.85■■□□□ 1.09
CDKN3-207ENST00000543789 ZNF787Q6DD87 383 aa21.85■■□□□ 1.09
CDKN3-207ENST00000543789 UNC5AQ6ZN44 842 aa21.85■■□□□ 1.09
CDKN3-207ENST00000543789 TRIM73Q86UV7 250 aa21.85■■□□□ 1.09
CDKN3-207ENST00000543789 CNGA4Q8IV77 575 aa21.85■■□□□ 1.09
CDKN3-207ENST00000543789 CLDN19Q8N6F1 224 aa21.85■■□□□ 1.09
CDKN3-207ENST00000543789 PROKR1Q8TCW9 393 aa21.85■■□□□ 1.09
CDKN3-207ENST00000543789 DNAJC1Q96KC8 554 aaKnown RBP21.85■■□□□ 1.09
CDKN3-207ENST00000543789 GBP5Q96PP8 586 aa21.85■■□□□ 1.09
CDKN3-207ENST00000543789 PPP1R2P1Q96PQ5 205 aa21.85■■□□□ 1.09
CDKN3-207ENST00000543789 CHRNA10Q9GZZ6 450 aa21.85■■□□□ 1.09
CDKN3-207ENST00000543789 ZNF552Q9H707 407 aaPredicted RBP21.85■■□□□ 1.09
CDKN3-207ENST00000543789 IFT80Q9P2H3 777 aaPredicted RBP21.85■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms