RNA–Protein interactions for RNA: ENST00000542877.5

TNC-212, Transcript of tenascin C, humanhuman

TSL 1 (best) BASIC

Gene TNC, Length 5,517 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNC-212ENST00000542877 KCNJ11Q14654 390 aa12.9□□□□□ -0.34
TNC-212ENST00000542877 TIGD6Q17RP2 521 aa12.9□□□□□ -0.34
TNC-212ENST00000542877 GPR153Q6NV75 609 aa12.9□□□□□ -0.34
TNC-212ENST00000542877 C2orf73Q8N5S3 287 aaPredicted RBP12.9□□□□□ -0.34
TNC-212ENST00000542877 MFSD1Q9H3U5 465 aa12.9□□□□□ -0.34
TNC-212ENST00000542877 FBXL21Q9UKT6 434 aa12.9□□□□□ -0.34
TNC-212ENST00000542877 BAIAP2Q9UQB8 552 aa12.9□□□□□ -0.34
TNC-212ENST00000542877 CFL2Q9Y281 166 aa12.9□□□□□ -0.34
TNC-212ENST00000542877 ZNF536O15090 1300 aa12.9□□□□□ -0.34
TNC-212ENST00000542877 PRORSD1PA6NEY8 169 aa12.9□□□□□ -0.35
TNC-212ENST00000542877 PITPNM1O00562 1244 aa12.9□□□□□ -0.35
TNC-212ENST00000542877 TOR1BO14657 336 aa12.9□□□□□ -0.35
TNC-212ENST00000542877 ARPC2O15144 300 aa12.9□□□□□ -0.35
TNC-212ENST00000542877 PAPSS2O95340 614 aaPredicted RBP12.9□□□□□ -0.35
TNC-212ENST00000542877 PIGRP01833 764 aa12.9□□□□□ -0.35
TNC-212ENST00000542877 MTHFD1P11586 935 aaKnown RBP12.9□□□□□ -0.35
TNC-212ENST00000542877 XRCC1P18887 633 aaPredicted RBP12.9□□□□□ -0.35
TNC-212ENST00000542877 LMO2P25791 158 aa12.9□□□□□ -0.35
TNC-212ENST00000542877 MVKQ03426 396 aa12.9□□□□□ -0.35
TNC-212ENST00000542877 HSPB3Q12988 150 aa12.9□□□□□ -0.35
TNC-212ENST00000542877 SH3PXD2AQ5TCZ1 1133 aa12.9□□□□□ -0.35
TNC-212ENST00000542877 TMEM198Q66K66 360 aa12.9□□□□□ -0.35
TNC-212ENST00000542877 CADM2Q8N3J6 435 aa12.9□□□□□ -0.35
TNC-212ENST00000542877 TRPM4Q8TD43 1214 aa12.9□□□□□ -0.35
TNC-212ENST00000542877 CANT1Q8WVQ1 401 aa12.9□□□□□ -0.35
TNC-212ENST00000542877 C5orf34Q96MH7 638 aa12.9□□□□□ -0.35
TNC-212ENST00000542877 GPER1Q99527 375 aa12.9□□□□□ -0.35
TNC-212ENST00000542877 EHD1Q9H4M9 534 aa12.9□□□□□ -0.35
TNC-212ENST00000542877 TBC1D17Q9HA65 648 aa12.9□□□□□ -0.35
TNC-212ENST00000542877 ZIM2Q9NZV7 527 aa12.9□□□□□ -0.35
TNC-212ENST00000542877 CKMT2P17540 419 aa12.89□□□□□ -0.35
TNC-212ENST00000542877 CYP2U1Q7Z449 544 aa12.89□□□□□ -0.35
TNC-212ENST00000542877 SAMD14Q8IZD0 417 aaPredicted RBP12.89□□□□□ -0.35
TNC-212ENST00000542877 CRELD1Q96HD1 420 aa12.89□□□□□ -0.35
TNC-212ENST00000542877 SLC35G5Q96KT7 338 aa12.89□□□□□ -0.35
TNC-212ENST00000542877 CEP295NLQ96MC4 621 aa12.89□□□□□ -0.35
TNC-212ENST00000542877 TCRBV7S3A2A0A539 114 aa12.89□□□□□ -0.35
TNC-212ENST00000542877 GSTT2BP0CG30 244 aa12.89□□□□□ -0.35
TNC-212ENST00000542877 ITGA3P26006 1051 aa12.89□□□□□ -0.35
TNC-212ENST00000542877 HCAR3P49019 387 aa12.89□□□□□ -0.35
TNC-212ENST00000542877 KHKP50053 298 aa12.89□□□□□ -0.35
TNC-212ENST00000542877 CLCN4P51793 760 aa12.89□□□□□ -0.35
TNC-212ENST00000542877 ATXN1P54253 815 aaKnown RBP12.89□□□□□ -0.35
TNC-212ENST00000542877 SLC18A2Q05940 514 aa12.89□□□□□ -0.35
TNC-212ENST00000542877 RBBP4Q09028 425 aa12.89□□□□□ -0.35
TNC-212ENST00000542877 SNX20Q7Z614 316 aa12.89□□□□□ -0.35
TNC-212ENST00000542877 MYOCQ99972 504 aa12.89□□□□□ -0.35
TNC-212ENST00000542877 SNTG1Q9NSN8 517 aa12.89□□□□□ -0.35
TNC-212ENST00000542877 ZNF358Q9NW07 568 aa12.89□□□□□ -0.35
TNC-212ENST00000542877 TVP23BQ9NYZ1 205 aa12.89□□□□□ -0.35
TNC-212ENST00000542877 PPM1HQ9ULR3 514 aa12.89□□□□□ -0.35
TNC-212ENST00000542877 DNAJA1P31689 397 aaKnown RBP12.89□□□□□ -0.35
TNC-212ENST00000542877 GJA8P48165 433 aa12.89□□□□□ -0.35
TNC-212ENST00000542877 CPNE8Q86YQ8 564 aa12.89□□□□□ -0.35
TNC-212ENST00000542877 OR4C6Q8NH72 309 aa12.89□□□□□ -0.35
TNC-212ENST00000542877 NEK7Q8TDX7 302 aa12.89□□□□□ -0.35
TNC-212ENST00000542877 ESAMQ96AP7 390 aa12.89□□□□□ -0.35
TNC-212ENST00000542877 GFM1Q96RP9 751 aaKnown RBP12.89□□□□□ -0.35
TNC-212ENST00000542877 POLR2J2Q9GZM3 115 aaKnown RBP12.89□□□□□ -0.35
TNC-212ENST00000542877 POLR3BQ9NW08 1133 aaPredicted RBP12.89□□□□□ -0.35
TNC-212ENST00000542877 OAZ3Q9UMX2 235 aa12.89□□□□□ -0.35
TNC-212ENST00000542877 FCF1Q9Y324 198 aaKnown RBP12.89□□□□□ -0.35
TNC-212ENST00000542877 SHPRHQ149N8 1683 aa12.89□□□□□ -0.35
TNC-212ENST00000542877 MRC1P22897 1456 aa12.89□□□□□ -0.35
TNC-212ENST00000542877 OR14I1A6ND48 311 aa12.89□□□□□ -0.35
TNC-212ENST00000542877 ARL5CA6NH57 179 aa12.89□□□□□ -0.35
TNC-212ENST00000542877 PDCD5O14737 125 aa12.89□□□□□ -0.35
TNC-212ENST00000542877 PDPK1O15530 556 aa12.89□□□□□ -0.35
TNC-212ENST00000542877 TFPIP10646 304 aa12.89□□□□□ -0.35
TNC-212ENST00000542877 PRPS1L1P21108 318 aa12.89□□□□□ -0.35
TNC-212ENST00000542877 IL1R2P27930 398 aa12.89□□□□□ -0.35
TNC-212ENST00000542877 NPTX1Q15818 432 aa12.89□□□□□ -0.35
TNC-212ENST00000542877 ATXN7L2Q5T6C5 722 aaPredicted RBP12.89□□□□□ -0.35
TNC-212ENST00000542877 NCBP2-AS2Q69YL0 99 aa12.89□□□□□ -0.35
TNC-212ENST00000542877 SUN5Q8TC36 379 aa12.89□□□□□ -0.35
TNC-212ENST00000542877 C2orf15Q8WU43 125 aaKnown RBP12.89□□□□□ -0.35
TNC-212ENST00000542877 ZBED6CLQ96FA7 236 aaPredicted RBP12.89□□□□□ -0.35
TNC-212ENST00000542877 MGME1Q9BQP7 344 aa12.89□□□□□ -0.35
TNC-212ENST00000542877 A8MT66 165 aa12.88□□□□□ -0.35
TNC-212ENST00000542877 OR1F1O43749 312 aa12.88□□□□□ -0.35
TNC-212ENST00000542877 MYCLP1P12525 358 aaPredicted RBP12.88□□□□□ -0.35
TNC-212ENST00000542877 FMO3P31513 532 aa12.88□□□□□ -0.35
TNC-212ENST00000542877 DNASE1L1P49184 302 aa12.88□□□□□ -0.35
TNC-212ENST00000542877 SLC9A4Q6AI14 798 aa12.88□□□□□ -0.35
TNC-212ENST00000542877 PDE12Q6L8Q7 609 aaKnown RBP12.88□□□□□ -0.35
TNC-212ENST00000542877 SLC51AQ86UW1 340 aa12.88□□□□□ -0.35
TNC-212ENST00000542877 HEPHQ9BQS7 1158 aa12.88□□□□□ -0.35
TNC-212ENST00000542877 POLR2J3Q9H1A7 115 aaKnown RBP12.88□□□□□ -0.35
TNC-212ENST00000542877 AKTIPQ9H8T0 292 aa12.88□□□□□ -0.35
TNC-212ENST00000542877 THUMPD1Q9NXG2 353 aaKnown RBP12.88□□□□□ -0.35
TNC-212ENST00000542877 NKX1-2Q9UD57 310 aaPredicted RBP12.88□□□□□ -0.35
TNC-212ENST00000542877 CD84Q9UIB8 345 aa12.88□□□□□ -0.35
TNC-212ENST00000542877 MYOM1P52179 1685 aa12.88□□□□□ -0.35
TNC-212ENST00000542877 ATF6P18850 670 aa12.88□□□□□ -0.35
TNC-212ENST00000542877 SLC6A4P31645 630 aa12.88□□□□□ -0.35
TNC-212ENST00000542877 OR2B6P58173 313 aa12.88□□□□□ -0.35
TNC-212ENST00000542877 STXBP1P61764 594 aaKnown RBP12.88□□□□□ -0.35
TNC-212ENST00000542877 CIR1Q86X95 450 aaPredicted RBP12.88□□□□□ -0.35
TNC-212ENST00000542877 OR10G2Q8NGC3 310 aa12.88□□□□□ -0.35
TNC-212ENST00000542877 ZNF599Q96NL3 588 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms