RNA–Protein interactions for RNA: ENST00000541990.5

THBS3-211, Transcript of thrombospondin 3, humanhuman

TSL 1 (best) BASIC

Gene THBS3, Length 2,928 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-211ENST00000541990 PDZD4Q76G19 769 aaPredicted RBP8.98□□□□□ -0.97
THBS3-211ENST00000541990 SPATC1Q76KD6 591 aa8.98□□□□□ -0.97
THBS3-211ENST00000541990 DNAJB7Q7Z6W7 309 aaPredicted RBP8.98□□□□□ -0.97
THBS3-211ENST00000541990 ARHGAP12Q8IWW6 846 aa8.98□□□□□ -0.97
THBS3-211ENST00000541990 GOLM1Q8NBJ4 401 aa8.98□□□□□ -0.97
THBS3-211ENST00000541990 FAM83FQ8NEG4 500 aaPredicted RBP8.98□□□□□ -0.97
THBS3-211ENST00000541990 ZNF461Q8TAF7 563 aa8.98□□□□□ -0.97
THBS3-211ENST00000541990 CCDC126Q96EE4 140 aa8.98□□□□□ -0.97
THBS3-211ENST00000541990 VMP1Q96GC9 406 aa8.98□□□□□ -0.97
THBS3-211ENST00000541990 NODALQ96S42 347 aa8.98□□□□□ -0.97
THBS3-211ENST00000541990 FSD1LQ9BXM9 530 aa8.98□□□□□ -0.97
THBS3-211ENST00000541990 TRIT1Q9H3H1 467 aaKnown RBP8.98□□□□□ -0.97
THBS3-211ENST00000541990 ENTPD7Q9NQZ7 604 aa8.98□□□□□ -0.97
THBS3-211ENST00000541990 ABCC13Q9NSE7 274 aa8.98□□□□□ -0.97
THBS3-211ENST00000541990 ZNF225Q9UK10 706 aa8.98□□□□□ -0.97
THBS3-211ENST00000541990 CAB39Q9Y376 341 aaPredicted RBP8.98□□□□□ -0.97
THBS3-211ENST00000541990 NEUROG3Q9Y4Z2 214 aa8.98□□□□□ -0.97
THBS3-211ENST00000541990 TSC2P49815 1807 aa8.97□□□□□ -0.97
THBS3-211ENST00000541990 A0A1W2PRU2 124 aa8.97□□□□□ -0.97
THBS3-211ENST00000541990 NCF1BA6NI72 391 aaPredicted RBP8.97□□□□□ -0.97
THBS3-211ENST00000541990 OR6C75A6NL08 312 aa8.97□□□□□ -0.97
THBS3-211ENST00000541990 NCF1CA8MVU1 366 aaPredicted RBP8.97□□□□□ -0.97
THBS3-211ENST00000541990 ZNF99A8MXY4 864 aaPredicted RBP8.97□□□□□ -0.97
THBS3-211ENST00000541990 COCHO43405 550 aa8.97□□□□□ -0.97
THBS3-211ENST00000541990 CACNG3O60359 315 aa8.97□□□□□ -0.97
THBS3-211ENST00000541990 MATN4O95460 622 aa8.97□□□□□ -0.97
THBS3-211ENST00000541990 NCF1P14598 390 aaPredicted RBP8.97□□□□□ -0.97
THBS3-211ENST00000541990 HNRNPFP52597 415 aaKnown RBP8.97□□□□□ -0.97
THBS3-211ENST00000541990 KCNK10P57789 538 aa8.97□□□□□ -0.97
THBS3-211ENST00000541990 ISL1P61371 349 aa8.97□□□□□ -0.97
THBS3-211ENST00000541990 HIST2H2ACQ16777 129 aaPredicted RBP8.97□□□□□ -0.97
THBS3-211ENST00000541990 ARL13BQ3SXY8 428 aa8.97□□□□□ -0.97
THBS3-211ENST00000541990 SLC8B1Q6J4K2 584 aa8.97□□□□□ -0.97
THBS3-211ENST00000541990 ZNF549Q6P9A3 640 aa8.97□□□□□ -0.97
THBS3-211ENST00000541990 SPESP1Q6UW49 350 aa8.97□□□□□ -0.97
THBS3-211ENST00000541990 USP43Q70EL4 1123 aa8.97□□□□□ -0.97
THBS3-211ENST00000541990 PAGE2Q7Z2X7 111 aa8.97□□□□□ -0.97
THBS3-211ENST00000541990 ADCK1Q86TW2 530 aa8.97□□□□□ -0.97
THBS3-211ENST00000541990 MON1AQ86VX9 555 aa8.97□□□□□ -0.97
THBS3-211ENST00000541990 SLC22A9Q8IVM8 553 aa8.97□□□□□ -0.97
THBS3-211ENST00000541990 TTC30BQ8N4P2 665 aa8.97□□□□□ -0.97
THBS3-211ENST00000541990 POF1BQ8WVV4 589 aa8.97□□□□□ -0.97
THBS3-211ENST00000541990 TCEAL4Q96EI5 215 aa8.97□□□□□ -0.97
THBS3-211ENST00000541990 MRPL17Q9NRX2 175 aaKnown RBP8.97□□□□□ -0.97
THBS3-211ENST00000541990 NEU3Q9UQ49 428 aa8.97□□□□□ -0.97
THBS3-211ENST00000541990 ASB1Q9Y576 335 aa8.97□□□□□ -0.97
THBS3-211ENST00000541990 A0A0D9SEW6 157 aa8.97□□□□□ -0.97
THBS3-211ENST00000541990 FAM92AA1XBS5 289 aa8.97□□□□□ -0.97
THBS3-211ENST00000541990 CCDC154A6NI56 674 aa8.97□□□□□ -0.97
THBS3-211ENST00000541990 J3KR12 359 aa8.97□□□□□ -0.97
THBS3-211ENST00000541990 M0R3G1 203 aa8.97□□□□□ -0.97
THBS3-211ENST00000541990 TBX1O43435 398 aa8.97□□□□□ -0.97
THBS3-211ENST00000541990 S100BP04271 92 aaPredicted RBP8.97□□□□□ -0.97
THBS3-211ENST00000541990 ALOX5P09917 674 aa8.97□□□□□ -0.97
THBS3-211ENST00000541990 CDH1P12830 882 aa8.97□□□□□ -0.97
THBS3-211ENST00000541990 CYP4B1P13584 511 aa8.97□□□□□ -0.97
THBS3-211ENST00000541990 CD1DP15813 335 aa8.97□□□□□ -0.97
THBS3-211ENST00000541990 ITIH1P19827 911 aa8.97□□□□□ -0.97
THBS3-211ENST00000541990 MZF1P28698 734 aaPredicted RBP8.97□□□□□ -0.97
THBS3-211ENST00000541990 SLC6A4P31645 630 aa8.97□□□□□ -0.97
THBS3-211ENST00000541990 AGTR2P50052 363 aa8.97□□□□□ -0.97
THBS3-211ENST00000541990 DGKQP52824 942 aa8.97□□□□□ -0.97
THBS3-211ENST00000541990 PTPRRQ15256 657 aa8.97□□□□□ -0.97
THBS3-211ENST00000541990 CRY1Q16526 586 aa8.97□□□□□ -0.97
THBS3-211ENST00000541990 SMN1Q16637 294 aaKnown RBP8.97□□□□□ -0.97
THBS3-211ENST00000541990 COLEC12Q5KU26 742 aa8.97□□□□□ -0.97
THBS3-211ENST00000541990 NADSYN1Q6IA69 706 aa8.97□□□□□ -0.97
THBS3-211ENST00000541990 UBE2Q1Q7Z7E8 422 aa8.97□□□□□ -0.97
THBS3-211ENST00000541990 GALNT5Q7Z7M9 940 aa8.97□□□□□ -0.97
THBS3-211ENST00000541990 OR6P1Q8NGX9 317 aa8.97□□□□□ -0.97
THBS3-211ENST00000541990 DYNC2LI1Q8TCX1 351 aa8.97□□□□□ -0.97
THBS3-211ENST00000541990 ING5Q8WYH8 240 aa8.97□□□□□ -0.97
THBS3-211ENST00000541990 FIG4Q92562 907 aa8.97□□□□□ -0.97
THBS3-211ENST00000541990 DHRS1Q96LJ7 313 aa8.97□□□□□ -0.97
THBS3-211ENST00000541990 SMIM14Q96QK8 99 aa8.97□□□□□ -0.97
THBS3-211ENST00000541990 CGREF1Q99674 301 aa8.97□□□□□ -0.97
THBS3-211ENST00000541990 BARD1Q99728 777 aaKnown RBP8.97□□□□□ -0.97
THBS3-211ENST00000541990 MYOCQ99972 504 aa8.97□□□□□ -0.97
THBS3-211ENST00000541990 FEM1AQ9BSK4 669 aa8.97□□□□□ -0.97
THBS3-211ENST00000541990 SLC39A8Q9C0K1 460 aa8.97□□□□□ -0.97
THBS3-211ENST00000541990 RMND5AQ9H871 391 aa8.97□□□□□ -0.97
THBS3-211ENST00000541990 THG1LQ9NWX6 298 aaKnown RBP8.97□□□□□ -0.97
THBS3-211ENST00000541990 HACD3Q9P035 362 aa8.97□□□□□ -0.97
THBS3-211ENST00000541990 SCML2Q9UQR0 700 aa8.97□□□□□ -0.97
THBS3-211ENST00000541990 G3V2T6 193 aa8.96□□□□□ -0.97
THBS3-211ENST00000541990 NCAM2O15394 837 aa8.96□□□□□ -0.97
THBS3-211ENST00000541990 HS6ST1O60243 411 aa8.96□□□□□ -0.97
THBS3-211ENST00000541990 EEDO75530 441 aaKnown RBP8.96□□□□□ -0.97
THBS3-211ENST00000541990 CYBBP04839 570 aa8.96□□□□□ -0.97
THBS3-211ENST00000541990 EPCAMP16422 314 aa8.96□□□□□ -0.97
THBS3-211ENST00000541990 PFKLP17858 780 aa8.96□□□□□ -0.97
THBS3-211ENST00000541990 PAX3P23760 479 aa8.96□□□□□ -0.97
THBS3-211ENST00000541990 GTF2E2P29084 291 aaKnown RBP8.96□□□□□ -0.97
THBS3-211ENST00000541990 CCR1P32246 355 aa8.96□□□□□ -0.97
THBS3-211ENST00000541990 EIF2DP41214 584 aaKnown RBP8.96□□□□□ -0.97
THBS3-211ENST00000541990 CCR2P41597 374 aa8.96□□□□□ -0.97
THBS3-211ENST00000541990 PPP2R2BQ00005 443 aa8.96□□□□□ -0.97
THBS3-211ENST00000541990 RAPSNQ13702 412 aa8.96□□□□□ -0.97
THBS3-211ENST00000541990 CAMK1Q14012 370 aa8.96□□□□□ -0.97
THBS3-211ENST00000541990 SEMA3AQ14563 771 aa8.96□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms