RNA–Protein interactions for RNA: ENST00000540960.1

CHD4-208, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 5

Gene CHD4, Length 892 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-208ENST00000540960 DLDP09622 509 aaKnown RBP8.22□□□□□ -1.09
CHD4-208ENST00000540960 GIMD1P0DJR0 217 aa8.22□□□□□ -1.09
CHD4-208ENST00000540960 CKMT1AP12532 417 aa8.22□□□□□ -1.09
CHD4-208ENST00000540960 SRCP12931 536 aa8.22□□□□□ -1.09
CHD4-208ENST00000540960 PKMP14618 531 aaKnown RBP8.22□□□□□ -1.09
CHD4-208ENST00000540960 PCSK2P16519 638 aa8.22□□□□□ -1.09
CHD4-208ENST00000540960 SAT1P21673 171 aa8.22□□□□□ -1.09
CHD4-208ENST00000540960 FDXRP22570 491 aa8.22□□□□□ -1.09
CHD4-208ENST00000540960 RPS3P23396 243 aaKnown RBP eCLIP8.22□□□□□ -1.09
CHD4-208ENST00000540960 CD38P28907 300 aa8.22□□□□□ -1.09
CHD4-208ENST00000540960 MC4RP32245 332 aa8.22□□□□□ -1.09
CHD4-208ENST00000540960 CD70P32970 193 aa8.22□□□□□ -1.09
CHD4-208ENST00000540960 SPAM1P38567 509 aa8.22□□□□□ -1.09
CHD4-208ENST00000540960 ABL2P42684 1182 aa8.22□□□□□ -1.09
CHD4-208ENST00000540960 DGKGP49619 791 aa8.22□□□□□ -1.09
CHD4-208ENST00000540960 NXPH1P58417 271 aa8.22□□□□□ -1.09
CHD4-208ENST00000540960 TAS2R39P59534 338 aa8.22□□□□□ -1.09
CHD4-208ENST00000540960 IL2P60568 153 aa8.22□□□□□ -1.09
CHD4-208ENST00000540960 MPP1Q00013 466 aa8.22□□□□□ -1.09
CHD4-208ENST00000540960 SRSF11Q05519 484 aaKnown RBP8.22□□□□□ -1.09
CHD4-208ENST00000540960 ACTN3Q08043 901 aaPredicted RBP8.22□□□□□ -1.09
CHD4-208ENST00000540960 TRAF2Q12933 501 aa8.22□□□□□ -1.09
CHD4-208ENST00000540960 ENPP2Q13822 863 aa8.22□□□□□ -1.09
CHD4-208ENST00000540960 ARHGEF7Q14155 803 aa8.22□□□□□ -1.09
CHD4-208ENST00000540960 TESK1Q15569 626 aa8.22□□□□□ -1.09
CHD4-208ENST00000540960 EIF2S3LQ2VIR3 472 aaKnown RBP8.22□□□□□ -1.09
CHD4-208ENST00000540960 MANEAQ5SRI9 462 aa8.22□□□□□ -1.09
CHD4-208ENST00000540960 ERAP2Q6P179 960 aa8.22□□□□□ -1.09
CHD4-208ENST00000540960 METTL2BQ6P1Q9 378 aaKnown RBP8.22□□□□□ -1.09
CHD4-208ENST00000540960 LINGO4Q6UY18 593 aa8.22□□□□□ -1.09
CHD4-208ENST00000540960 GDPD4Q6W3E5 623 aa8.22□□□□□ -1.09
CHD4-208ENST00000540960 CDHR3Q6ZTQ4 885 aa8.22□□□□□ -1.09
CHD4-208ENST00000540960 SNX20Q7Z614 316 aa8.22□□□□□ -1.09
CHD4-208ENST00000540960 APCDD1Q8J025 514 aa8.22□□□□□ -1.09
CHD4-208ENST00000540960 TTC30BQ8N4P2 665 aa8.22□□□□□ -1.09
CHD4-208ENST00000540960 OR52K2Q8NGK3 314 aa8.22□□□□□ -1.09
CHD4-208ENST00000540960 PIH1D2Q8WWB5 315 aa8.22□□□□□ -1.09
CHD4-208ENST00000540960 INPP5DQ92835 1189 aa8.22□□□□□ -1.09
CHD4-208ENST00000540960 ECHDC3Q96DC8 303 aa8.22□□□□□ -1.09
CHD4-208ENST00000540960 PDLIM5Q96HC4 596 aaKnown RBP8.22□□□□□ -1.09
CHD4-208ENST00000540960 PPP1R16AQ96I34 528 aa8.22□□□□□ -1.09
CHD4-208ENST00000540960 LMLNQ96KR4 655 aa8.22□□□□□ -1.09
CHD4-208ENST00000540960 RILPQ96NA2 401 aa8.22□□□□□ -1.09
CHD4-208ENST00000540960 PLEKHG4BQ96PX9 1271 aa8.22□□□□□ -1.09
CHD4-208ENST00000540960 PANX3Q96QZ0 392 aa8.22□□□□□ -1.09
CHD4-208ENST00000540960 CCT7Q99832 543 aa8.22□□□□□ -1.09
CHD4-208ENST00000540960 AARSD1Q9BTE6 412 aaKnown RBP8.22□□□□□ -1.09
CHD4-208ENST00000540960 SLC12A9Q9BXP2 914 aa8.22□□□□□ -1.09
CHD4-208ENST00000540960 DERL2Q9GZP9 239 aa8.22□□□□□ -1.09
CHD4-208ENST00000540960 DRC3Q9H069 523 aa8.22□□□□□ -1.09
CHD4-208ENST00000540960 CLPBQ9H078 707 aa8.22□□□□□ -1.09
CHD4-208ENST00000540960 NPHS2Q9NP85 383 aa8.22□□□□□ -1.09
CHD4-208ENST00000540960 FBXO6Q9NRD1 293 aaPredicted RBP8.22□□□□□ -1.09
CHD4-208ENST00000540960 AASDHPPTQ9NRN7 309 aa8.22□□□□□ -1.09
CHD4-208ENST00000540960 DNAJC28Q9NX36 388 aa8.22□□□□□ -1.09
CHD4-208ENST00000540960 PKD2L2Q9NZM6 624 aa8.22□□□□□ -1.09
CHD4-208ENST00000540960 IL17CQ9P0M4 197 aa8.22□□□□□ -1.09
CHD4-208ENST00000540960 SUN2Q9UH99 717 aa8.22□□□□□ -1.09
CHD4-208ENST00000540960 TRMT6Q9UJA5 497 aaKnown RBP8.22□□□□□ -1.09
CHD4-208ENST00000540960 GNPTGQ9UJJ9 305 aa8.22□□□□□ -1.09
CHD4-208ENST00000540960 ZFP69BQ9UJL9 534 aa8.22□□□□□ -1.09
CHD4-208ENST00000540960 ERVW-1Q9UQF0 538 aa8.22□□□□□ -1.09
CHD4-208ENST00000540960 FCF1Q9Y324 198 aaKnown RBP8.22□□□□□ -1.09
CHD4-208ENST00000540960 RAP2CQ9Y3L5 183 aa8.22□□□□□ -1.09
CHD4-208ENST00000540960 ARL5AQ9Y689 179 aa8.22□□□□□ -1.09
CHD4-208ENST00000540960 TACC2O95359 2948 aa8.21□□□□□ -1.09
CHD4-208ENST00000540960 A0A0G2JND7 137 aa8.21□□□□□ -1.1
CHD4-208ENST00000540960 GLYATL1P3A0A0U1RQE8 302 aa8.21□□□□□ -1.1
CHD4-208ENST00000540960 C1orf232A0A0U1RR37 186 aa8.21□□□□□ -1.1
CHD4-208ENST00000540960 PABPN1LA6NDY0 278 aaKnown RBP8.21□□□□□ -1.1
CHD4-208ENST00000540960 GOLGA8TH3BQL2 631 aa8.21□□□□□ -1.1
CHD4-208ENST00000540960 K7EM74 188 aa8.21□□□□□ -1.1
CHD4-208ENST00000540960 TLR4O00206 839 aa8.21□□□□□ -1.1
CHD4-208ENST00000540960 PSMD11O00231 422 aa8.21□□□□□ -1.1
CHD4-208ENST00000540960 FFAR2O15552 330 aa8.21□□□□□ -1.1
CHD4-208ENST00000540960 SYNCRIPO60506 623 aaKnown RBP8.21□□□□□ -1.1
CHD4-208ENST00000540960 CD160O95971 181 aa8.21□□□□□ -1.1
CHD4-208ENST00000540960 LDLRP01130 860 aa8.21□□□□□ -1.1
CHD4-208ENST00000540960 GSTM1P09488 218 aa8.21□□□□□ -1.1
CHD4-208ENST00000540960 CCDC166P0CW27 439 aa8.21□□□□□ -1.1
CHD4-208ENST00000540960 CBSLP0DN79 551 aa8.21□□□□□ -1.1
CHD4-208ENST00000540960 GABRB3P28472 473 aa8.21□□□□□ -1.1
CHD4-208ENST00000540960 HLA-FP30511 346 aa8.21□□□□□ -1.1
CHD4-208ENST00000540960 CBSP35520 551 aa8.21□□□□□ -1.1
CHD4-208ENST00000540960 RGRP47804 291 aa8.21□□□□□ -1.1
CHD4-208ENST00000540960 PDX1P52945 283 aa8.21□□□□□ -1.1
CHD4-208ENST00000540960 GSTM4Q03013 218 aa8.21□□□□□ -1.1
CHD4-208ENST00000540960 SFSWAPQ12872 951 aaKnown RBP8.21□□□□□ -1.1
CHD4-208ENST00000540960 BNIP1Q12981 228 aa8.21□□□□□ -1.1
CHD4-208ENST00000540960 CDC16Q13042 620 aa8.21□□□□□ -1.1
CHD4-208ENST00000540960 RCN2Q14257 317 aa8.21□□□□□ -1.1
CHD4-208ENST00000540960 PCLAFQ15004 111 aa8.21□□□□□ -1.1
CHD4-208ENST00000540960 DLG2Q15700 870 aa8.21□□□□□ -1.1
CHD4-208ENST00000540960 GALNTL6Q49A17 601 aa8.21□□□□□ -1.1
CHD4-208ENST00000540960 ZRANB3Q5FWF4 1079 aa8.21□□□□□ -1.1
CHD4-208ENST00000540960 SH2D4BQ5SQS7 431 aa8.21□□□□□ -1.1
CHD4-208ENST00000540960 KIAA0895LQ68EN5 471 aa8.21□□□□□ -1.1
CHD4-208ENST00000540960 CNSTQ6PJW8 725 aa8.21□□□□□ -1.1
CHD4-208ENST00000540960 CRTC1Q6UUV9 634 aa8.21□□□□□ -1.1
CHD4-208ENST00000540960 ACAD11Q709F0 780 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms