RNA–Protein interactions for RNA: ENST00000540891.1

CD9-209, Transcript of CD9 molecule, humanhuman

TSL 3

Gene CD9, Length 642 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-209ENST00000540891 CTBP1Q13363 440 aa16.41■□□□□ 0.22
CD9-209ENST00000540891 THOC5Q13769 683 aaKnown RBP16.41■□□□□ 0.22
CD9-209ENST00000540891 BBS9Q3SYG4 887 aa16.41■□□□□ 0.22
CD9-209ENST00000540891 DNAJC21Q5F1R6 531 aaKnown RBP16.41■□□□□ 0.22
CD9-209ENST00000540891 TMEM164Q5U3C3 297 aa16.41■□□□□ 0.22
CD9-209ENST00000540891 ZNF572Q7Z3I7 529 aaPredicted RBP16.41■□□□□ 0.22
CD9-209ENST00000540891 DTX1Q86Y01 620 aa16.41■□□□□ 0.22
CD9-209ENST00000540891 OR5K2Q8NHB8 316 aa16.41■□□□□ 0.22
CD9-209ENST00000540891 ASZ1Q8WWH4 475 aa16.41■□□□□ 0.22
CD9-209ENST00000540891 LCN9Q8WX39 176 aa16.41■□□□□ 0.22
CD9-209ENST00000540891 CD180Q99467 661 aa16.41■□□□□ 0.22
CD9-209ENST00000540891 DPH1Q9BZG8 443 aa16.41■□□□□ 0.22
CD9-209ENST00000540891 SRMSQ9H3Y6 488 aa16.41■□□□□ 0.22
CD9-209ENST00000540891 XKR8Q9H6D3 395 aa16.41■□□□□ 0.22
CD9-209ENST00000540891 FBXO6Q9NRD1 293 aaPredicted RBP16.41■□□□□ 0.22
CD9-209ENST00000540891 INTS10Q9NVR2 710 aaKnown RBP16.41■□□□□ 0.22
CD9-209ENST00000540891 GALPQ9UBC7 116 aa16.41■□□□□ 0.22
CD9-209ENST00000540891 MED16Q9Y2X0 877 aa16.41■□□□□ 0.22
CD9-209ENST00000540891 SNX24Q9Y343 169 aa16.41■□□□□ 0.22
CD9-209ENST00000540891 CFAP47Q6ZTR5 3102 aa16.41■□□□□ 0.22
CD9-209ENST00000540891 IQCJ-SCHIP1C9J366 451 aaPredicted RBP16.4■□□□□ 0.22
CD9-209ENST00000540891 SMAPO00193 183 aa16.4■□□□□ 0.22
CD9-209ENST00000540891 LIPCP11150 499 aa16.4■□□□□ 0.22
CD9-209ENST00000540891 PKMP14618 531 aaKnown RBP16.4■□□□□ 0.22
CD9-209ENST00000540891 NELFEP18615 380 aaKnown RBP16.4■□□□□ 0.22
CD9-209ENST00000540891 ELK3P41970 407 aa16.4■□□□□ 0.22
CD9-209ENST00000540891 RAB15P59190 212 aa16.4■□□□□ 0.22
CD9-209ENST00000540891 MPP1Q00013 466 aa16.4■□□□□ 0.22
CD9-209ENST00000540891 GBX1Q14549 363 aa16.4■□□□□ 0.22
CD9-209ENST00000540891 HSP90AA5PQ58FG0 334 aa16.4■□□□□ 0.22
CD9-209ENST00000540891 DNTTIP2Q5QJE6 756 aaKnown RBP16.4■□□□□ 0.22
CD9-209ENST00000540891 HP1BP3Q5SSJ5 553 aaPredicted RBP16.4■□□□□ 0.22
CD9-209ENST00000540891 ZNF549Q6P9A3 640 aa16.4■□□□□ 0.22
CD9-209ENST00000540891 FBXO38Q6PIJ6 1188 aa16.4■□□□□ 0.22
CD9-209ENST00000540891 KCNMB4Q86W47 210 aa16.4■□□□□ 0.22
CD9-209ENST00000540891 AMIGO1Q86WK6 493 aa16.4■□□□□ 0.22
CD9-209ENST00000540891 SPNS2Q8IVW8 549 aa16.4■□□□□ 0.22
CD9-209ENST00000540891 ADGRF3Q8IZF5 1079 aa16.4■□□□□ 0.22
CD9-209ENST00000540891 UBXN4Q92575 508 aa16.4■□□□□ 0.22
CD9-209ENST00000540891 SLC41A2Q96JW4 573 aa16.4■□□□□ 0.22
CD9-209ENST00000540891 SPRY4Q9C004 299 aa16.4■□□□□ 0.22
CD9-209ENST00000540891 TWSG1Q9GZX9 223 aa16.4■□□□□ 0.22
CD9-209ENST00000540891 TRIT1Q9H3H1 467 aaKnown RBP16.4■□□□□ 0.22
CD9-209ENST00000540891 POMT2Q9UKY4 750 aa16.4■□□□□ 0.22
CD9-209ENST00000540891 TEX264Q9Y6I9 313 aa16.4■□□□□ 0.22
CD9-209ENST00000540891 FAM187AA6NFU0 413 aa16.39■□□□□ 0.21
CD9-209ENST00000540891 TLCD2A6NGC4 264 aa16.39■□□□□ 0.21
CD9-209ENST00000540891 H3BMM5 538 aa16.39■□□□□ 0.21
CD9-209ENST00000540891 PFDN6O15212 129 aa16.39■□□□□ 0.21
CD9-209ENST00000540891 ERVK-10P10266 1014 aa16.39■□□□□ 0.21
CD9-209ENST00000540891 CD82P27701 267 aa16.39■□□□□ 0.21
CD9-209ENST00000540891 ABRQ12979 859 aa16.39■□□□□ 0.21
CD9-209ENST00000540891 SRSF6Q13247 344 aaKnown RBP16.39■□□□□ 0.21
CD9-209ENST00000540891 GRB7Q14451 532 aa16.39■□□□□ 0.21
CD9-209ENST00000540891 TMED2Q15363 201 aa16.39■□□□□ 0.21
CD9-209ENST00000540891 SPANXN3Q5MJ09 141 aa16.39■□□□□ 0.21
CD9-209ENST00000540891 PLEKHS1Q5SXH7 462 aa16.39■□□□□ 0.21
CD9-209ENST00000540891 DCAF12Q5T6F0 453 aa16.39■□□□□ 0.21
CD9-209ENST00000540891 UNC5AQ6ZN44 842 aa16.39■□□□□ 0.21
CD9-209ENST00000540891 OTOAQ7RTW8 1153 aa16.39■□□□□ 0.21
CD9-209ENST00000540891 LMNTD2Q8IXW0 634 aa16.39■□□□□ 0.21
CD9-209ENST00000540891 PDIK1LQ8N165 341 aa16.39■□□□□ 0.21
CD9-209ENST00000540891 FAM136AQ96C01 138 aa16.39■□□□□ 0.21
CD9-209ENST00000540891 ERP44Q9BS26 406 aa16.39■□□□□ 0.21
CD9-209ENST00000540891 NAT9Q9BTE0 207 aa16.39■□□□□ 0.21
CD9-209ENST00000540891 MENTQ9BUN1 341 aa16.39■□□□□ 0.21
CD9-209ENST00000540891 ASPSCR1Q9BZE9 553 aa16.39■□□□□ 0.21
CD9-209ENST00000540891 LATS2Q9NRM7 1088 aa16.39■□□□□ 0.21
CD9-209ENST00000540891 IARS2Q9NSE4 1012 aaKnown RBP16.39■□□□□ 0.21
CD9-209ENST00000540891 POLG2Q9UHN1 485 aa16.39■□□□□ 0.21
CD9-209ENST00000540891 FBXO5Q9UKT4 447 aa16.39■□□□□ 0.21
CD9-209ENST00000540891 PLAGL1Q9UM63 463 aa16.39■□□□□ 0.21
CD9-209ENST00000540891 LHX6Q9UPM6 363 aa16.39■□□□□ 0.21
CD9-209ENST00000540891 CHMP2BQ9UQN3 213 aa16.39■□□□□ 0.21
CD9-209ENST00000540891 TDRKHQ9Y2W6 561 aaKnown RBP16.39■□□□□ 0.21
CD9-209ENST00000540891 SDK2Q58EX2 2172 aa16.38■□□□□ 0.21
CD9-209ENST00000540891 E7ESA3 106 aa16.38■□□□□ 0.21
CD9-209ENST00000540891 POLR1CO15160 346 aaPredicted RBP16.38■□□□□ 0.21
CD9-209ENST00000540891 EFSO43281 561 aa16.38■□□□□ 0.21
CD9-209ENST00000540891 HAUS5O94927 633 aa16.38■□□□□ 0.21
CD9-209ENST00000540891 TTC4O95801 387 aa16.38■□□□□ 0.21
CD9-209ENST00000540891 FOLR1P15328 257 aa16.38■□□□□ 0.21
CD9-209ENST00000540891 CLCN7P51798 805 aa16.38■□□□□ 0.21
CD9-209ENST00000540891 PRKAA1Q13131 559 aa16.38■□□□□ 0.21
CD9-209ENST00000540891 CBLBQ13191 982 aa16.38■□□□□ 0.21
CD9-209ENST00000540891 KCNAB1Q14722 419 aa16.38■□□□□ 0.21
CD9-209ENST00000540891 HIF1AQ16665 826 aa16.38■□□□□ 0.21
CD9-209ENST00000540891 STEAP4Q687X5 459 aa16.38■□□□□ 0.21
CD9-209ENST00000540891 ARMC6Q6NXE6 501 aa16.38■□□□□ 0.21
CD9-209ENST00000540891 CNSTQ6PJW8 725 aa16.38■□□□□ 0.21
CD9-209ENST00000540891 UNC5DQ6UXZ4 953 aa16.38■□□□□ 0.21
CD9-209ENST00000540891 KMT5CQ86Y97 462 aa16.38■□□□□ 0.21
CD9-209ENST00000540891 C2CD4AQ8NCU7 369 aaPredicted RBP16.38■□□□□ 0.21
CD9-209ENST00000540891 GIMAP7Q8NHV1 300 aa16.38■□□□□ 0.21
CD9-209ENST00000540891 CALML6Q8TD86 181 aa16.38■□□□□ 0.21
CD9-209ENST00000540891 TEFMQ96QE5 360 aaKnown RBP16.38■□□□□ 0.21
CD9-209ENST00000540891 OR6C1Q96RD1 312 aa16.38■□□□□ 0.21
CD9-209ENST00000540891 SLC30A3Q99726 388 aa16.38■□□□□ 0.21
CD9-209ENST00000540891 FAM167BQ9BTA0 163 aa16.38■□□□□ 0.21
CD9-209ENST00000540891 DPH5Q9H2P9 285 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms