RNA–Protein interactions for RNA: ENST00000540608.5

NPC1-202, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 2

Gene NPC1, Length 2,790 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-202ENST00000540608 TMCO5AQ8N6Q1 288 aa12.06□□□□□ -0.48
NPC1-202ENST00000540608 SPATA17Q96L03 361 aa12.06□□□□□ -0.48
NPC1-202ENST00000540608 DPY30Q9C005 99 aa12.06□□□□□ -0.48
NPC1-202ENST00000540608 CRISPLD1Q9H336 500 aa12.06□□□□□ -0.48
NPC1-202ENST00000540608 INVSQ9Y283 1065 aa12.06□□□□□ -0.48
NPC1-202ENST00000540608 VWA8A3KMH1 1905 aa12.06□□□□□ -0.48
NPC1-202ENST00000540608 GOLGA8CPA6NN73 597 aa12.06□□□□□ -0.48
NPC1-202ENST00000540608 SLC28A1O00337 649 aa12.06□□□□□ -0.48
NPC1-202ENST00000540608 SLC1A7O00341 560 aa12.06□□□□□ -0.48
NPC1-202ENST00000540608 KPNA4O00629 521 aaPredicted RBP12.06□□□□□ -0.48
NPC1-202ENST00000540608 TAPBPO15533 448 aa12.06□□□□□ -0.48
NPC1-202ENST00000540608 HS6ST1O60243 411 aa12.06□□□□□ -0.48
NPC1-202ENST00000540608 INMTO95050 263 aa12.06□□□□□ -0.48
NPC1-202ENST00000540608 GLUD1P00367 558 aa12.06□□□□□ -0.48
NPC1-202ENST00000540608 PGRP06401 933 aa12.06□□□□□ -0.48
NPC1-202ENST00000540608 IL1RNP18510 177 aa12.06□□□□□ -0.48
NPC1-202ENST00000540608 OCA2Q04671 838 aa12.06□□□□□ -0.48
NPC1-202ENST00000540608 MBTPS1Q14703 1052 aa12.06□□□□□ -0.48
NPC1-202ENST00000540608 PTPRRQ15256 657 aa12.06□□□□□ -0.48
NPC1-202ENST00000540608 CTF1Q16619 201 aa12.06□□□□□ -0.48
NPC1-202ENST00000540608 ZC3H12BQ5HYM0 836 aaKnown RBP12.06□□□□□ -0.48
NPC1-202ENST00000540608 RNF165Q6ZSG1 346 aa12.06□□□□□ -0.48
NPC1-202ENST00000540608 TMEM179BQ7Z7N9 219 aa12.06□□□□□ -0.48
NPC1-202ENST00000540608 MICU2Q8IYU8 434 aa12.06□□□□□ -0.48
NPC1-202ENST00000540608 FRS2Q8WU20 508 aa12.06□□□□□ -0.48
NPC1-202ENST00000540608 FBLIM1Q8WUP2 373 aa12.06□□□□□ -0.48
NPC1-202ENST00000540608 TBCDQ9BTW9 1192 aa12.06□□□□□ -0.48
NPC1-202ENST00000540608 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.06□□□□□ -0.48
NPC1-202ENST00000540608 PCDHB1Q9Y5F3 818 aa12.06□□□□□ -0.48
NPC1-202ENST00000540608 PCDHGB1Q9Y5G3 927 aa12.06□□□□□ -0.48
NPC1-202ENST00000540608 ZNF99A8MXY4 864 aaPredicted RBP12.05□□□□□ -0.48
NPC1-202ENST00000540608 PTGES3LE9PB15 166 aa12.05□□□□□ -0.48
NPC1-202ENST00000540608 XYLBO75191 536 aa12.05□□□□□ -0.48
NPC1-202ENST00000540608 NDUFS2O75306 463 aa12.05□□□□□ -0.48
NPC1-202ENST00000540608 CREG1O75629 220 aa12.05□□□□□ -0.48
NPC1-202ENST00000540608 EOMESO95936 686 aa12.05□□□□□ -0.48
NPC1-202ENST00000540608 CCDC159P0C7I6 412 aa12.05□□□□□ -0.48
NPC1-202ENST00000540608 HOXB6P17509 224 aaKnown RBP12.05□□□□□ -0.48
NPC1-202ENST00000540608 PRKACGP22612 351 aa12.05□□□□□ -0.48
NPC1-202ENST00000540608 NRIP1P48552 1158 aa12.05□□□□□ -0.48
NPC1-202ENST00000540608 HSPA7P48741 367 aa12.05□□□□□ -0.48
NPC1-202ENST00000540608 GP2P55259 537 aaKnown RBP12.05□□□□□ -0.48
NPC1-202ENST00000540608 CACNG1Q06432 222 aa12.05□□□□□ -0.48
NPC1-202ENST00000540608 MRPL58Q14197 206 aaKnown RBP12.05□□□□□ -0.48
NPC1-202ENST00000540608 ATG9BQ674R7 924 aa12.05□□□□□ -0.48
NPC1-202ENST00000540608 LINC00299Q6ZSB3 139 aa12.05□□□□□ -0.48
NPC1-202ENST00000540608 DCP2Q8IU60 420 aaKnown RBP12.05□□□□□ -0.48
NPC1-202ENST00000540608 ZCCHC7Q8N3Z6 543 aaKnown RBP12.05□□□□□ -0.48
NPC1-202ENST00000540608 POP5Q969H6 163 aaKnown RBP12.05□□□□□ -0.48
NPC1-202ENST00000540608 ZNF566Q969W8 418 aa12.05□□□□□ -0.48
NPC1-202ENST00000540608 ITPKCQ96DU7 683 aa12.05□□□□□ -0.48
NPC1-202ENST00000540608 NSUN3Q9H649 340 aaKnown RBP12.05□□□□□ -0.48
NPC1-202ENST00000540608 CLMPQ9H6B4 373 aa12.05□□□□□ -0.48
NPC1-202ENST00000540608 ARMC7Q9H6L4 198 aa12.05□□□□□ -0.48
NPC1-202ENST00000540608 PAK1IP1Q9NWT1 392 aaPredicted RBP12.05□□□□□ -0.48
NPC1-202ENST00000540608 ELOVL2Q9NXB9 296 aa12.05□□□□□ -0.48
NPC1-202ENST00000540608 DGKBQ9Y6T7 804 aa12.05□□□□□ -0.48
NPC1-202ENST00000540608 FRMPD3Q5JV73 1810 aa12.05□□□□□ -0.48
NPC1-202ENST00000540608 ILVBLA1L0T0 632 aa12.05□□□□□ -0.48
NPC1-202ENST00000540608 OR6C75A6NL08 312 aa12.05□□□□□ -0.48
NPC1-202ENST00000540608 PRMT5O14744 637 aaPredicted RBP12.05□□□□□ -0.48
NPC1-202ENST00000540608 NR4A1P22736 598 aa12.05□□□□□ -0.48
NPC1-202ENST00000540608 IDUAP35475 653 aa12.05□□□□□ -0.48
NPC1-202ENST00000540608 GNPDA1P46926 289 aa12.05□□□□□ -0.48
NPC1-202ENST00000540608 RPS24P62847 133 aaKnown RBP12.05□□□□□ -0.48
NPC1-202ENST00000540608 CDK5R2Q13319 367 aa12.05□□□□□ -0.48
NPC1-202ENST00000540608 CYP2A13Q16696 494 aa12.05□□□□□ -0.48
NPC1-202ENST00000540608 RFX4Q33E94 735 aa12.05□□□□□ -0.48
NPC1-202ENST00000540608 SPANXN4Q5MJ08 99 aa12.05□□□□□ -0.48
NPC1-202ENST00000540608 CACHD1Q5VU97 1274 aa12.05□□□□□ -0.48
NPC1-202ENST00000540608 SLC24A5Q71RS6 500 aa12.05□□□□□ -0.48
NPC1-202ENST00000540608 TRIM46Q7Z4K8 759 aa12.05□□□□□ -0.48
NPC1-202ENST00000540608 HIPK1Q86Z02 1210 aa12.05□□□□□ -0.48
NPC1-202ENST00000540608 BCL7BQ9BQE9 202 aa12.05□□□□□ -0.48
NPC1-202ENST00000540608 TRIT1Q9H3H1 467 aaKnown RBP12.05□□□□□ -0.48
NPC1-202ENST00000540608 KAT8Q9H7Z6 458 aaKnown RBP12.05□□□□□ -0.48
NPC1-202ENST00000540608 TMEFF2Q9UIK5 374 aaPredicted RBP12.05□□□□□ -0.48
NPC1-202ENST00000540608 TRBV5-3A0A0A0MS03 114 aa12.04□□□□□ -0.48
NPC1-202ENST00000540608 M0QX08 132 aa12.04□□□□□ -0.48
NPC1-202ENST00000540608 E2F6O75461 281 aa12.04□□□□□ -0.48
NPC1-202ENST00000540608 CLDN11O75508 207 aa12.04□□□□□ -0.48
NPC1-202ENST00000540608 CKBP12277 381 aa12.04□□□□□ -0.48
NPC1-202ENST00000540608 SLC11A2P49281 568 aa12.04□□□□□ -0.48
NPC1-202ENST00000540608 RAD23AP54725 363 aa12.04□□□□□ -0.48
NPC1-202ENST00000540608 PPP1R8Q12972 351 aaKnown RBP12.04□□□□□ -0.48
NPC1-202ENST00000540608 OXA1LQ15070 435 aa12.04□□□□□ -0.48
NPC1-202ENST00000540608 LDLRAP1Q5SW96 308 aa12.04□□□□□ -0.48
NPC1-202ENST00000540608 FAM171A1Q5VUB5 890 aa12.04□□□□□ -0.48
NPC1-202ENST00000540608 CALHM3Q86XJ0 350 aa12.04□□□□□ -0.48
NPC1-202ENST00000540608 PLPP6Q8IY26 295 aa12.04□□□□□ -0.48
NPC1-202ENST00000540608 LIX1Q8N485 282 aa12.04□□□□□ -0.48
NPC1-202ENST00000540608 ARL10Q8N8L6 244 aa12.04□□□□□ -0.48
NPC1-202ENST00000540608 PIK3C3Q8NEB9 887 aa12.04□□□□□ -0.48
NPC1-202ENST00000540608 DNAJB8Q8NHS0 232 aa12.04□□□□□ -0.48
NPC1-202ENST00000540608 VMP1Q96GC9 406 aa12.04□□□□□ -0.48
NPC1-202ENST00000540608 CEP295NLQ96MC4 621 aa12.04□□□□□ -0.48
NPC1-202ENST00000540608 SEPT5Q99719 369 aaPredicted RBP12.04□□□□□ -0.48
NPC1-202ENST00000540608 MROQ9BYG7 248 aa12.04□□□□□ -0.48
NPC1-202ENST00000540608 WDR12Q9GZL7 423 aaKnown RBP12.04□□□□□ -0.48
NPC1-202ENST00000540608 HMG20AQ9NP66 347 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms