RNA–Protein interactions for RNA: ENST00000540434.1

TMEM258-205, Transcript of transmembrane protein 258, humanhuman

TSL 2

Gene TMEM258, Length 553 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM258-205ENST00000540434 S1PR4O95977 384 aa11.11□□□□□ -0.63
TMEM258-205ENST00000540434 VIPP01282 170 aa11.11□□□□□ -0.63
TMEM258-205ENST00000540434 MTHFD1P11586 935 aaKnown RBP11.11□□□□□ -0.63
TMEM258-205ENST00000540434 NR1D1P20393 614 aa11.11□□□□□ -0.63
TMEM258-205ENST00000540434 GABRB3P28472 473 aa11.11□□□□□ -0.63
TMEM258-205ENST00000540434 MAPK9P45984 424 aa11.11□□□□□ -0.63
TMEM258-205ENST00000540434 GFERP55789 205 aa11.11□□□□□ -0.63
TMEM258-205ENST00000540434 SLC7A5Q01650 507 aa11.11□□□□□ -0.63
TMEM258-205ENST00000540434 CTBP1Q13363 440 aa11.11□□□□□ -0.63
TMEM258-205ENST00000540434 SQSTM1Q13501 440 aa11.11□□□□□ -0.63
TMEM258-205ENST00000540434 LAMB3Q13751 1172 aa11.11□□□□□ -0.63
TMEM258-205ENST00000540434 DHX34Q14147 1143 aaKnown RBP11.11□□□□□ -0.63
TMEM258-205ENST00000540434 BBS9Q3SYG4 887 aa11.11□□□□□ -0.63
TMEM258-205ENST00000540434 FHL5Q5TD97 284 aa11.11□□□□□ -0.63
TMEM258-205ENST00000540434 DUPD1Q68J44 220 aa11.11□□□□□ -0.63
TMEM258-205ENST00000540434 KIAA0930Q6ICG6 404 aaPredicted RBP11.11□□□□□ -0.63
TMEM258-205ENST00000540434 NEPROQ6NW34 567 aa11.11□□□□□ -0.63
TMEM258-205ENST00000540434 ZNF549Q6P9A3 640 aa11.11□□□□□ -0.63
TMEM258-205ENST00000540434 SLC9B2Q86UD5 537 aa11.11□□□□□ -0.63
TMEM258-205ENST00000540434 HM13Q8TCT9 377 aa11.11□□□□□ -0.63
TMEM258-205ENST00000540434 LPGAT1Q92604 370 aa11.11□□□□□ -0.63
TMEM258-205ENST00000540434 ZNF592Q92610 1267 aa11.11□□□□□ -0.63
TMEM258-205ENST00000540434 RSC1A1Q92681 617 aa11.11□□□□□ -0.63
TMEM258-205ENST00000540434 FAM136AQ96C01 138 aa11.11□□□□□ -0.63
TMEM258-205ENST00000540434 C12orf66Q96MD2 445 aa11.11□□□□□ -0.63
TMEM258-205ENST00000540434 SLC38A3Q99624 504 aa11.11□□□□□ -0.63
TMEM258-205ENST00000540434 SLC30A3Q99726 388 aa11.11□□□□□ -0.63
TMEM258-205ENST00000540434 ERP44Q9BS26 406 aa11.11□□□□□ -0.63
TMEM258-205ENST00000540434 STRADBQ9C0K7 418 aa11.11□□□□□ -0.63
TMEM258-205ENST00000540434 MED16Q9Y2X0 877 aa11.11□□□□□ -0.63
TMEM258-205ENST00000540434 MAD1L1Q9Y6D9 718 aa11.11□□□□□ -0.63
TMEM258-205ENST00000540434 AKAP9Q99996 3911 aa11.11□□□□□ -0.63
TMEM258-205ENST00000540434 C17orf113A0A1B0GUU1 675 aa11.1□□□□□ -0.63
TMEM258-205ENST00000540434 KRT87PA6NCN2 255 aa11.1□□□□□ -0.63
TMEM258-205ENST00000540434 A8MU76 341 aa11.1□□□□□ -0.63
TMEM258-205ENST00000540434 IQCJ-SCHIP1C9J366 451 aaPredicted RBP11.1□□□□□ -0.63
TMEM258-205ENST00000540434 CFAP99D6REC4 459 aa11.1□□□□□ -0.63
TMEM258-205ENST00000540434 KIF1CO43896 1103 aaKnown RBP11.1□□□□□ -0.63
TMEM258-205ENST00000540434 AP2A2O94973 939 aa11.1□□□□□ -0.63
TMEM258-205ENST00000540434 CPNE6O95741 557 aa11.1□□□□□ -0.63
TMEM258-205ENST00000540434 CLDN1O95832 211 aa11.1□□□□□ -0.63
TMEM258-205ENST00000540434 JMJD7P0C870 316 aa11.1□□□□□ -0.63
TMEM258-205ENST00000540434 ERVK-10P10266 1014 aa11.1□□□□□ -0.63
TMEM258-205ENST00000540434 RALBP11234 206 aa11.1□□□□□ -0.63
TMEM258-205ENST00000540434 CCL4P13236 92 aa11.1□□□□□ -0.63
TMEM258-205ENST00000540434 ACADLP28330 430 aa11.1□□□□□ -0.63
TMEM258-205ENST00000540434 FMO4P31512 558 aa11.1□□□□□ -0.63
TMEM258-205ENST00000540434 ELK3P41970 407 aa11.1□□□□□ -0.63
TMEM258-205ENST00000540434 LEPRP48357 1165 aaKnown RBP11.1□□□□□ -0.63
TMEM258-205ENST00000540434 PGGT1BP53609 377 aa11.1□□□□□ -0.63
TMEM258-205ENST00000540434 LIMK2P53671 638 aa11.1□□□□□ -0.63
TMEM258-205ENST00000540434 SARNPP82979 210 aaKnown RBP11.1□□□□□ -0.63
TMEM258-205ENST00000540434 MPP1Q00013 466 aa11.1□□□□□ -0.63
TMEM258-205ENST00000540434 TIAL1Q01085 375 aaKnown RBP eCLIP11.1□□□□□ -0.63
TMEM258-205ENST00000540434 MORF4L2Q15014 288 aa11.1□□□□□ -0.63
TMEM258-205ENST00000540434 TYSND1Q2T9J0 566 aa11.1□□□□□ -0.63
TMEM258-205ENST00000540434 SNAP47Q5SQN1 464 aa11.1□□□□□ -0.63
TMEM258-205ENST00000540434 TRMT10BQ6PF06 316 aaKnown RBP11.1□□□□□ -0.63
TMEM258-205ENST00000540434 ZDHHC24Q6UX98 284 aa11.1□□□□□ -0.63
TMEM258-205ENST00000540434 SYDE1Q6ZW31 735 aaPredicted RBP11.1□□□□□ -0.63
TMEM258-205ENST00000540434 PIM3Q86V86 326 aa11.1□□□□□ -0.63
TMEM258-205ENST00000540434 HOOK3Q86VS8 718 aa11.1□□□□□ -0.63
TMEM258-205ENST00000540434 ATCAYQ86WG3 371 aa11.1□□□□□ -0.63
TMEM258-205ENST00000540434 CILP2Q8IUL8 1156 aa11.1□□□□□ -0.63
TMEM258-205ENST00000540434 ANKMY2Q8IV38 441 aa11.1□□□□□ -0.63
TMEM258-205ENST00000540434 NOA1Q8NC60 698 aaKnown RBP11.1□□□□□ -0.63
TMEM258-205ENST00000540434 HEXDCQ8WVB3 486 aa11.1□□□□□ -0.63
TMEM258-205ENST00000540434 NCSTNQ92542 709 aa11.1□□□□□ -0.63
TMEM258-205ENST00000540434 USP7Q93009 1102 aa11.1□□□□□ -0.63
TMEM258-205ENST00000540434 RNF31Q96EP0 1072 aa11.1□□□□□ -0.63
TMEM258-205ENST00000540434 STAMBPL1Q96FJ0 436 aa11.1□□□□□ -0.63
TMEM258-205ENST00000540434 SNF8Q96H20 258 aa11.1□□□□□ -0.63
TMEM258-205ENST00000540434 CCDC74BQ96LY2 380 aa11.1□□□□□ -0.63
TMEM258-205ENST00000540434 PPM1MQ96MI6 270 aa11.1□□□□□ -0.63
TMEM258-205ENST00000540434 EBNA1BP2Q99848 306 aaKnown RBP11.1□□□□□ -0.63
TMEM258-205ENST00000540434 LRRC1Q9BTT6 524 aa11.1□□□□□ -0.63
TMEM258-205ENST00000540434 FBXO6Q9NRD1 293 aaPredicted RBP11.1□□□□□ -0.63
TMEM258-205ENST00000540434 IMP3Q9NV31 184 aaKnown RBP11.1□□□□□ -0.63
TMEM258-205ENST00000540434 OCIAD1Q9NX40 245 aa11.1□□□□□ -0.63
TMEM258-205ENST00000540434 PDP2Q9P2J9 529 aa11.1□□□□□ -0.63
TMEM258-205ENST00000540434 ANAPC5Q9UJX4 755 aa11.1□□□□□ -0.63
TMEM258-205ENST00000540434 ACSL5Q9ULC5 683 aa11.1□□□□□ -0.63
TMEM258-205ENST00000540434 CRYL1Q9Y2S2 319 aa11.1□□□□□ -0.63
TMEM258-205ENST00000540434 LOXL2Q9Y4K0 774 aa11.1□□□□□ -0.63
TMEM258-205ENST00000540434 TEX264Q9Y6I9 313 aa11.1□□□□□ -0.63
TMEM258-205ENST00000540434 FAM169AQ9Y6X4 670 aa11.1□□□□□ -0.63
TMEM258-205ENST00000540434 NF1P21359 2839 aa11.1□□□□□ -0.63
TMEM258-205ENST00000540434 F8P00451 2351 aa11.1□□□□□ -0.63
TMEM258-205ENST00000540434 RP1L1Q8IWN7 2480 aaPredicted RBP11.1□□□□□ -0.63
TMEM258-205ENST00000540434 MAGEB16A2A368 324 aa11.09□□□□□ -0.63
TMEM258-205ENST00000540434 AP3B1O00203 1094 aa11.09□□□□□ -0.63
TMEM258-205ENST00000540434 PRMT5O14744 637 aaPredicted RBP11.09□□□□□ -0.63
TMEM258-205ENST00000540434 NIPSNAP2O75323 286 aa11.09□□□□□ -0.63
TMEM258-205ENST00000540434 GPC4O75487 556 aa11.09□□□□□ -0.63
TMEM258-205ENST00000540434 PIAS1O75925 651 aa11.09□□□□□ -0.63
TMEM258-205ENST00000540434 USP1O94782 785 aa11.09□□□□□ -0.63
TMEM258-205ENST00000540434 HAUS5O94927 633 aa11.09□□□□□ -0.63
TMEM258-205ENST00000540434 THRAP10827 490 aa11.09□□□□□ -0.63
TMEM258-205ENST00000540434 VCLP18206 1134 aa11.09□□□□□ -0.63
TMEM258-205ENST00000540434 AOAHP28039 575 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms