RNA–Protein interactions for RNA: ENST00000540166.5

DDB1-217, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 3,906 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-217ENST00000540166 MAPK12P53778 367 aa8.54□□□□□ -1.04
DDB1-217ENST00000540166 NTHL1P78549 312 aa8.54□□□□□ -1.04
DDB1-217ENST00000540166 ZXDAP98168 799 aa8.54□□□□□ -1.04
DDB1-217ENST00000540166 SEMA5AQ13591 1074 aa8.54□□□□□ -1.04
DDB1-217ENST00000540166 CDK10Q15131 360 aa8.54□□□□□ -1.04
DDB1-217ENST00000540166 NPTX1Q15818 432 aa8.54□□□□□ -1.04
DDB1-217ENST00000540166 PCSK7Q16549 785 aa8.54□□□□□ -1.04
DDB1-217ENST00000540166 PPP1R3AQ16821 1122 aa8.54□□□□□ -1.04
DDB1-217ENST00000540166 RTP2Q5QGT7 225 aa8.54□□□□□ -1.04
DDB1-217ENST00000540166 TPRG1Q6ZUI0 275 aa8.54□□□□□ -1.04
DDB1-217ENST00000540166 SIMC1Q8NDZ2 872 aa8.54□□□□□ -1.04
DDB1-217ENST00000540166 SPPL2BQ8TCT7 592 aa8.54□□□□□ -1.04
DDB1-217ENST00000540166 TMBIM1Q969X1 311 aa8.54□□□□□ -1.04
DDB1-217ENST00000540166 TMCO6Q96DC7 493 aa8.54□□□□□ -1.04
DDB1-217ENST00000540166 MFSD3Q96ES6 412 aa8.54□□□□□ -1.04
DDB1-217ENST00000540166 VMP1Q96GC9 406 aa8.54□□□□□ -1.04
DDB1-217ENST00000540166 MYRFLQ96LU7 910 aa8.54□□□□□ -1.04
DDB1-217ENST00000540166 DHRS9Q9BPW9 319 aa8.54□□□□□ -1.04
DDB1-217ENST00000540166 SLC7A5P2Q9GIP4 190 aa8.54□□□□□ -1.04
DDB1-217ENST00000540166 MUC3BQ9H195 1237 aa8.54□□□□□ -1.04
DDB1-217ENST00000540166 MUC13Q9H3R2 512 aa8.54□□□□□ -1.04
DDB1-217ENST00000540166 KCNK12Q9HB15 430 aa8.54□□□□□ -1.04
DDB1-217ENST00000540166 EXD2Q9NVH0 621 aa8.54□□□□□ -1.04
DDB1-217ENST00000540166 TAS2R9Q9NYW1 312 aa8.54□□□□□ -1.04
DDB1-217ENST00000540166 COQ3Q9NZJ6 369 aa8.54□□□□□ -1.04
DDB1-217ENST00000540166 CCDC59Q9P031 241 aaKnown RBP8.54□□□□□ -1.04
DDB1-217ENST00000540166 PCDHB8Q9UN66 801 aa8.54□□□□□ -1.04
DDB1-217ENST00000540166 PEX16Q9Y5Y5 336 aa8.54□□□□□ -1.04
DDB1-217ENST00000540166 MAGEB16A2A368 324 aa8.54□□□□□ -1.04
DDB1-217ENST00000540166 BTN3A3O00478 584 aa8.54□□□□□ -1.04
DDB1-217ENST00000540166 JCHAINP01591 159 aa8.54□□□□□ -1.04
DDB1-217ENST00000540166 RBP1P09455 135 aa8.54□□□□□ -1.04
DDB1-217ENST00000540166 OR4Q2P0C623 313 aa8.54□□□□□ -1.04
DDB1-217ENST00000540166 CD1EP15812 388 aa8.54□□□□□ -1.04
DDB1-217ENST00000540166 JUNBP17275 347 aaPredicted RBP8.54□□□□□ -1.04
DDB1-217ENST00000540166 KCNC4Q03721 635 aa8.54□□□□□ -1.04
DDB1-217ENST00000540166 CHRNEQ04844 493 aa8.54□□□□□ -1.04
DDB1-217ENST00000540166 OLIG2Q13516 323 aa8.54□□□□□ -1.04
DDB1-217ENST00000540166 SELPLGQ14242 412 aa8.54□□□□□ -1.04
DDB1-217ENST00000540166 LRRC32Q14392 662 aa8.54□□□□□ -1.04
DDB1-217ENST00000540166 DMC1Q14565 340 aa8.54□□□□□ -1.04
DDB1-217ENST00000540166 ATAD3CQ5T2N8 411 aa8.54□□□□□ -1.04
DDB1-217ENST00000540166 C16orf62Q7Z3J2 963 aa8.54□□□□□ -1.04
DDB1-217ENST00000540166 NT5DC4Q86YG4 428 aa8.54□□□□□ -1.04
DDB1-217ENST00000540166 FAM109AQ8N4B1 249 aa8.54□□□□□ -1.04
DDB1-217ENST00000540166 OR8H1Q8NGG4 311 aa8.54□□□□□ -1.04
DDB1-217ENST00000540166 MRPL57Q9BQC6 102 aaKnown RBP8.54□□□□□ -1.04
DDB1-217ENST00000540166 ANKHQ9HCJ1 492 aa8.54□□□□□ -1.04
DDB1-217ENST00000540166 PTPRHQ9HD43 1115 aa8.54□□□□□ -1.04
DDB1-217ENST00000540166 AKIP1Q9NQ31 210 aa8.54□□□□□ -1.04
DDB1-217ENST00000540166 FAM86C1Q9NVL1 165 aa8.54□□□□□ -1.04
DDB1-217ENST00000540166 KCNN3Q9UGI6 736 aa8.54□□□□□ -1.04
DDB1-217ENST00000540166 SIX4Q9UIU6 781 aa8.54□□□□□ -1.04
DDB1-217ENST00000540166 EFCAB10A6NFE3 127 aa8.54□□□□□ -1.04
DDB1-217ENST00000540166 HACD1B0YJ81 288 aa8.54□□□□□ -1.04
DDB1-217ENST00000540166 I3L521 148 aa8.54□□□□□ -1.04
DDB1-217ENST00000540166 BCKDKO14874 412 aa8.54□□□□□ -1.04
DDB1-217ENST00000540166 MDM4O15151 490 aa8.54□□□□□ -1.04
DDB1-217ENST00000540166 CYP7B1O75881 506 aa8.54□□□□□ -1.04
DDB1-217ENST00000540166 IL32P24001 234 aa8.54□□□□□ -1.04
DDB1-217ENST00000540166 DNAJB1P25685 340 aa8.54□□□□□ -1.04
DDB1-217ENST00000540166 SMARCB1Q12824 385 aa8.54□□□□□ -1.04
DDB1-217ENST00000540166 SYT16Q17RD7 645 aa8.54□□□□□ -1.04
DDB1-217ENST00000540166 PLEKHG6Q3KR16 790 aa8.54□□□□□ -1.04
DDB1-217ENST00000540166 CERCAMQ5T4B2 595 aa8.54□□□□□ -1.04
DDB1-217ENST00000540166 PLEKHM3Q6ZWE6 761 aa8.54□□□□□ -1.04
DDB1-217ENST00000540166 CYS1Q717R9 158 aa8.54□□□□□ -1.04
DDB1-217ENST00000540166 AMIGO1Q86WK6 493 aa8.54□□□□□ -1.04
DDB1-217ENST00000540166 TMEM173Q86WV6 379 aaPredicted RBP8.54□□□□□ -1.04
DDB1-217ENST00000540166 PROSER1Q86XN7 944 aa8.54□□□□□ -1.04
DDB1-217ENST00000540166 GALNT13Q8IUC8 556 aa8.54□□□□□ -1.04
DDB1-217ENST00000540166 IPMKQ8NFU5 416 aa8.54□□□□□ -1.04
DDB1-217ENST00000540166 CLEC4CQ8WTT0 213 aa8.54□□□□□ -1.04
DDB1-217ENST00000540166 STON2Q8WXE9 905 aa8.54□□□□□ -1.04
DDB1-217ENST00000540166 KCTD15Q96SI1 283 aaPredicted RBP8.54□□□□□ -1.04
DDB1-217ENST00000540166 RBM4BQ9BQ04 359 aaKnown RBP8.54□□□□□ -1.04
DDB1-217ENST00000540166 RBM4Q9BWF3 364 aaKnown RBP8.54□□□□□ -1.04
DDB1-217ENST00000540166 CCNB1IP1Q9NPC3 277 aa8.54□□□□□ -1.04
DDB1-217ENST00000540166 DYRK4Q9NR20 520 aa8.54□□□□□ -1.04
DDB1-217ENST00000540166 ATPIF1Q9UII2 106 aa8.54□□□□□ -1.04
DDB1-217ENST00000540166 GON4LQ3T8J9 2241 aa8.53□□□□□ -1.04
DDB1-217ENST00000540166 TRAV19A0A0A6YYK7 116 aa8.53□□□□□ -1.04
DDB1-217ENST00000540166 FAM95CA0A1B0GW59 222 aa8.53□□□□□ -1.04
DDB1-217ENST00000540166 PDPK1O15530 556 aa8.53□□□□□ -1.04
DDB1-217ENST00000540166 MFSD11O43934 449 aa8.53□□□□□ -1.04
DDB1-217ENST00000540166 DLX3O60479 287 aa8.53□□□□□ -1.04
DDB1-217ENST00000540166 NPHS1O60500 1241 aa8.53□□□□□ -1.04
DDB1-217ENST00000540166 RECQL5O94762 991 aaPredicted RBP8.53□□□□□ -1.04
DDB1-217ENST00000540166 JUNP05412 331 aaKnown RBP8.53□□□□□ -1.04
DDB1-217ENST00000540166 ZNF37AP17032 561 aaPredicted RBP8.53□□□□□ -1.04
DDB1-217ENST00000540166 LBPP18428 481 aa8.53□□□□□ -1.04
DDB1-217ENST00000540166 CRHBPP24387 322 aa8.53□□□□□ -1.04
DDB1-217ENST00000540166 HNF4AP41235 474 aa8.53□□□□□ -1.04
DDB1-217ENST00000540166 GSK3BP49841 420 aa8.53□□□□□ -1.04
DDB1-217ENST00000540166 RAB10P61026 200 aa8.53□□□□□ -1.04
DDB1-217ENST00000540166 ZNF45Q02386 682 aa8.53□□□□□ -1.04
DDB1-217ENST00000540166 SIM2Q14190 667 aaPredicted RBP8.53□□□□□ -1.04
DDB1-217ENST00000540166 ATP6AP1LQ52LC2 224 aa8.53□□□□□ -1.04
DDB1-217ENST00000540166 UBXN11Q5T124 520 aa8.53□□□□□ -1.04
DDB1-217ENST00000540166 WSCD1Q658N2 575 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms