RNA–Protein interactions for RNA: ENST00000539934.5

DDX55-206, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 2,240 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-206ENST00000539934 RPL34P49207 117 aaKnown RBP12.38□□□□□ -0.43
DDX55-206ENST00000539934 HNMTP50135 292 aa12.38□□□□□ -0.43
DDX55-206ENST00000539934 YWHAGP61981 247 aaKnown RBP eCLIP12.38□□□□□ -0.43
DDX55-206ENST00000539934 ZNF33AQ06730 810 aa12.38□□□□□ -0.43
DDX55-206ENST00000539934 ADIGQ0VDE8 80 aa12.38□□□□□ -0.43
DDX55-206ENST00000539934 TUSC3Q13454 348 aa12.38□□□□□ -0.43
DDX55-206ENST00000539934 DLG2Q15700 870 aa12.38□□□□□ -0.43
DDX55-206ENST00000539934 FAM171A1Q5VUB5 890 aa12.38□□□□□ -0.43
DDX55-206ENST00000539934 ATG16L1Q676U5 607 aa12.38□□□□□ -0.43
DDX55-206ENST00000539934 RAB12Q6IQ22 244 aa12.38□□□□□ -0.43
DDX55-206ENST00000539934 BBS12Q6ZW61 710 aa12.38□□□□□ -0.43
DDX55-206ENST00000539934 CYP4Z2PQ8N1L4 340 aa12.38□□□□□ -0.43
DDX55-206ENST00000539934 SLC15A4Q8N697 577 aa12.38□□□□□ -0.43
DDX55-206ENST00000539934 EFHBQ8N7U6 833 aa12.38□□□□□ -0.43
DDX55-206ENST00000539934 ZSCAN1Q8NBB4 408 aa12.38□□□□□ -0.43
DDX55-206ENST00000539934 PDPRQ8NCN5 879 aa12.38□□□□□ -0.43
DDX55-206ENST00000539934 MCUQ8NE86 351 aa12.38□□□□□ -0.43
DDX55-206ENST00000539934 SNX19Q92543 992 aa12.38□□□□□ -0.43
DDX55-206ENST00000539934 APOPT1Q96IL0 206 aa12.38□□□□□ -0.43
DDX55-206ENST00000539934 QRFPRQ96P65 431 aa12.38□□□□□ -0.43
DDX55-206ENST00000539934 MIPEPQ99797 713 aa12.38□□□□□ -0.43
DDX55-206ENST00000539934 NUDT16L1Q9BRJ7 211 aaKnown RBP12.38□□□□□ -0.43
DDX55-206ENST00000539934 PHF7Q9BWX1 381 aaPredicted RBP12.38□□□□□ -0.43
DDX55-206ENST00000539934 TXLNGYQ9BZA5 131 aa12.38□□□□□ -0.43
DDX55-206ENST00000539934 WDR12Q9GZL7 423 aaKnown RBP12.38□□□□□ -0.43
DDX55-206ENST00000539934 LRRC4Q9HBW1 653 aa12.38□□□□□ -0.43
DDX55-206ENST00000539934 ZDHHC4Q9NPG8 344 aa12.38□□□□□ -0.43
DDX55-206ENST00000539934 PCDHB16Q9NRJ7 776 aa12.38□□□□□ -0.43
DDX55-206ENST00000539934 VSX1Q9NZR4 365 aaPredicted RBP12.38□□□□□ -0.43
DDX55-206ENST00000539934 PCDHB5Q9Y5E4 795 aa12.38□□□□□ -0.43
DDX55-206ENST00000539934 PLXNA3P51805 1871 aa12.38□□□□□ -0.43
DDX55-206ENST00000539934 TMEM82A0PJX8 343 aa12.37□□□□□ -0.43
DDX55-206ENST00000539934 H0YIV9 168 aa12.37□□□□□ -0.43
DDX55-206ENST00000539934 I3L4J1 428 aa12.37□□□□□ -0.43
DDX55-206ENST00000539934 GSC2O15499 205 aa12.37□□□□□ -0.43
DDX55-206ENST00000539934 HS6ST1O60243 411 aa12.37□□□□□ -0.43
DDX55-206ENST00000539934 CCNB2O95067 398 aa12.37□□□□□ -0.43
DDX55-206ENST00000539934 APOL3O95236 402 aa12.37□□□□□ -0.43
DDX55-206ENST00000539934 GOSR1O95249 250 aa12.37□□□□□ -0.43
DDX55-206ENST00000539934 SCNN1AP37088 669 aa12.37□□□□□ -0.43
DDX55-206ENST00000539934 LEPRP48357 1165 aaKnown RBP12.37□□□□□ -0.43
DDX55-206ENST00000539934 RACK1P63244 317 aaKnown RBP12.37□□□□□ -0.43
DDX55-206ENST00000539934 CAV1Q03135 178 aa12.37□□□□□ -0.43
DDX55-206ENST00000539934 BTKQ06187 659 aa12.37□□□□□ -0.43
DDX55-206ENST00000539934 STX5Q13190 355 aa12.37□□□□□ -0.43
DDX55-206ENST00000539934 ARHGAP19Q14CB8 494 aa12.37□□□□□ -0.43
DDX55-206ENST00000539934 TAZQ16635 292 aa12.37□□□□□ -0.43
DDX55-206ENST00000539934 TRMT5Q32P41 509 aaKnown RBP12.37□□□□□ -0.43
DDX55-206ENST00000539934 SFT2D3Q587I9 215 aa12.37□□□□□ -0.43
DDX55-206ENST00000539934 KIAA0319Q5VV43 1072 aa12.37□□□□□ -0.43
DDX55-206ENST00000539934 OR9A1PQ8NGU1 263 aa12.37□□□□□ -0.43
DDX55-206ENST00000539934 ACTL9Q8TC94 416 aa12.37□□□□□ -0.43
DDX55-206ENST00000539934 FOPNLQ96NB1 174 aa12.37□□□□□ -0.43
DDX55-206ENST00000539934 C1orf50Q9BV19 199 aa12.37□□□□□ -0.43
DDX55-206ENST00000539934 PRKD2Q9BZL6 878 aa12.37□□□□□ -0.43
DDX55-206ENST00000539934 PLXNA4Q9HCM2 1894 aa12.37□□□□□ -0.43
DDX55-206ENST00000539934 GSN-AS1Q9NRJ2 163 aa12.37□□□□□ -0.43
DDX55-206ENST00000539934 RCOR3Q9P2K3 495 aaPredicted RBP12.37□□□□□ -0.43
DDX55-206ENST00000539934 SAE1Q9UBE0 346 aaPredicted RBP12.37□□□□□ -0.43
DDX55-206ENST00000539934 RAB26Q9ULW5 256 aa12.37□□□□□ -0.43
DDX55-206ENST00000539934 DRG1Q9Y295 367 aaKnown RBP12.37□□□□□ -0.43
DDX55-206ENST00000539934 NEU2Q9Y3R4 380 aa12.37□□□□□ -0.43
DDX55-206ENST00000539934 SAMHD1Q9Y3Z3 626 aaKnown RBP12.37□□□□□ -0.43
DDX55-206ENST00000539934 AUP1Q9Y679 476 aa12.37□□□□□ -0.43
DDX55-206ENST00000539934 TSC2P49815 1807 aa12.37□□□□□ -0.43
DDX55-206ENST00000539934 KIAA1671Q9BY89 1806 aa12.37□□□□□ -0.43
DDX55-206ENST00000539934 SCO1O75880 301 aa12.37□□□□□ -0.43
DDX55-206ENST00000539934 BEST1O76090 585 aa12.37□□□□□ -0.43
DDX55-206ENST00000539934 IVDP26440 423 aa12.37□□□□□ -0.43
DDX55-206ENST00000539934 ATP5C1P36542 298 aaKnown RBP12.37□□□□□ -0.43
DDX55-206ENST00000539934 CPA2P48052 419 aa12.37□□□□□ -0.43
DDX55-206ENST00000539934 SOX9P48436 509 aa12.37□□□□□ -0.43
DDX55-206ENST00000539934 CAPZA1P52907 286 aa12.37□□□□□ -0.43
DDX55-206ENST00000539934 TMEM44Q2T9K0 475 aa12.37□□□□□ -0.43
DDX55-206ENST00000539934 SPOUT1Q5T280 376 aaKnown RBP12.37□□□□□ -0.43
DDX55-206ENST00000539934 C1orf185Q5T7R7 199 aa12.37□□□□□ -0.43
DDX55-206ENST00000539934 IZUMO3Q5VZ72 239 aa12.37□□□□□ -0.43
DDX55-206ENST00000539934 FBXL19Q6PCT2 694 aa12.37□□□□□ -0.43
DDX55-206ENST00000539934 KIAA1324Q6UXG2 1013 aaKnown RBP12.37□□□□□ -0.43
DDX55-206ENST00000539934 PLEKHG7Q6ZR37 379 aa12.37□□□□□ -0.43
DDX55-206ENST00000539934 CLEC20AQ6ZU45 233 aa12.37□□□□□ -0.43
DDX55-206ENST00000539934 PAQR9Q6ZVX9 377 aa12.37□□□□□ -0.43
DDX55-206ENST00000539934 METTL23Q86XA0 190 aa12.37□□□□□ -0.43
DDX55-206ENST00000539934 SIX6OS1Q8N1H7 587 aa12.37□□□□□ -0.43
DDX55-206ENST00000539934 HASPINQ8TF76 798 aa12.37□□□□□ -0.43
DDX55-206ENST00000539934 SLC13A3Q8WWT9 602 aa12.37□□□□□ -0.43
DDX55-206ENST00000539934 ATP2A3Q93084 1043 aa12.37□□□□□ -0.43
DDX55-206ENST00000539934 RFKQ969G6 155 aa12.37□□□□□ -0.43
DDX55-206ENST00000539934 ZNF669Q96BR6 464 aaPredicted RBP12.37□□□□□ -0.43
DDX55-206ENST00000539934 ISOC1Q96CN7 298 aa12.37□□□□□ -0.43
DDX55-206ENST00000539934 ZNF347Q96SE7 839 aa12.37□□□□□ -0.43
DDX55-206ENST00000539934 NOL6Q9H6R4 1146 aaKnown RBP12.37□□□□□ -0.43
DDX55-206ENST00000539934 RANBP3Q9H6Z4 567 aaPredicted RBP12.37□□□□□ -0.43
DDX55-206ENST00000539934 PNPLA8Q9NP80 782 aa12.37□□□□□ -0.43
DDX55-206ENST00000539934 THUMPD1Q9NXG2 353 aaKnown RBP12.37□□□□□ -0.43
DDX55-206ENST00000539934 CDH9Q9ULB4 789 aa12.37□□□□□ -0.43
DDX55-206ENST00000539934 CORINQ9Y5Q5 1042 aa12.37□□□□□ -0.43
DDX55-206ENST00000539934 ACTL7AQ9Y615 435 aa12.37□□□□□ -0.43
DDX55-206ENST00000539934 CEP250Q9BV73 2442 aa12.36□□□□□ -0.43
DDX55-206ENST00000539934 MYBPHLA2RUH7 354 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms