RNA–Protein interactions for RNA: ENST00000539506.5

SFSWAP-208, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 3,149 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-208ENST00000539506 GMNNO75496 209 aa12.33□□□□□ -0.44
SFSWAP-208ENST00000539506 MYO1DO94832 1006 aa12.33□□□□□ -0.44
SFSWAP-208ENST00000539506 CST1P01037 141 aa12.33□□□□□ -0.44
SFSWAP-208ENST00000539506 CRHBPP24387 322 aa12.33□□□□□ -0.44
SFSWAP-208ENST00000539506 SLC11A2P49281 568 aa12.33□□□□□ -0.44
SFSWAP-208ENST00000539506 OCA2Q04671 838 aa12.33□□□□□ -0.44
SFSWAP-208ENST00000539506 KCNAB2Q13303 367 aa12.33□□□□□ -0.44
SFSWAP-208ENST00000539506 GTDC1Q4AE62 458 aa12.33□□□□□ -0.44
SFSWAP-208ENST00000539506 C6orf136Q5SQH8 315 aa12.33□□□□□ -0.44
SFSWAP-208ENST00000539506 IRAK1BP1Q5VVH5 260 aa12.33□□□□□ -0.44
SFSWAP-208ENST00000539506 TMEM179BQ7Z7N9 219 aa12.33□□□□□ -0.44
SFSWAP-208ENST00000539506 TRUB1Q8WWH5 349 aaKnown RBP12.33□□□□□ -0.44
SFSWAP-208ENST00000539506 BRINP2Q9C0B6 783 aa12.33□□□□□ -0.44
SFSWAP-208ENST00000539506 ACTL8Q9H568 366 aa12.33□□□□□ -0.44
SFSWAP-208ENST00000539506 DFNA5O60443 496 aa12.33□□□□□ -0.44
SFSWAP-208ENST00000539506 CLDN11O75508 207 aa12.33□□□□□ -0.44
SFSWAP-208ENST00000539506 GSNP06396 782 aa12.33□□□□□ -0.44
SFSWAP-208ENST00000539506 CNPP09543 421 aaKnown RBP12.33□□□□□ -0.44
SFSWAP-208ENST00000539506 UROSP10746 265 aa12.33□□□□□ -0.44
SFSWAP-208ENST00000539506 PSMB9P28065 219 aa12.33□□□□□ -0.44
SFSWAP-208ENST00000539506 OR1D2P34982 312 aa12.33□□□□□ -0.44
SFSWAP-208ENST00000539506 NR4A2P43354 598 aa12.33□□□□□ -0.44
SFSWAP-208ENST00000539506 IL5RAQ01344 420 aa12.33□□□□□ -0.44
SFSWAP-208ENST00000539506 KCNJ8Q15842 424 aa12.33□□□□□ -0.44
SFSWAP-208ENST00000539506 ATXN7L2Q5T6C5 722 aaPredicted RBP12.33□□□□□ -0.44
SFSWAP-208ENST00000539506 LHX8Q68G74 356 aa12.33□□□□□ -0.44
SFSWAP-208ENST00000539506 THAP5Q7Z6K1 395 aa12.33□□□□□ -0.44
SFSWAP-208ENST00000539506 SLC22A16Q86VW1 577 aa12.33□□□□□ -0.44
SFSWAP-208ENST00000539506 C8orf59Q8N0T1 100 aaPredicted RBP12.33□□□□□ -0.44
SFSWAP-208ENST00000539506 NKAPQ8N5F7 415 aaKnown RBP12.33□□□□□ -0.44
SFSWAP-208ENST00000539506 NCLNQ969V3 563 aa12.33□□□□□ -0.44
SFSWAP-208ENST00000539506 MTFMTQ96DP5 389 aaKnown RBP12.33□□□□□ -0.44
SFSWAP-208ENST00000539506 GIN1Q9NXP7 522 aa12.33□□□□□ -0.44
SFSWAP-208ENST00000539506 WDR37Q9Y2I8 494 aa12.33□□□□□ -0.44
SFSWAP-208ENST00000539506 PLXNA4Q9HCM2 1894 aa12.33□□□□□ -0.44
SFSWAP-208ENST00000539506 G3V2T6 193 aa12.33□□□□□ -0.44
SFSWAP-208ENST00000539506 K7ERQ8 282 aa12.33□□□□□ -0.44
SFSWAP-208ENST00000539506 PSMD11O00231 422 aa12.33□□□□□ -0.44
SFSWAP-208ENST00000539506 FFAR3O14843 346 aa12.33□□□□□ -0.44
SFSWAP-208ENST00000539506 LSM1O15116 133 aaKnown RBP12.33□□□□□ -0.44
SFSWAP-208ENST00000539506 GSTA4O15217 222 aa12.33□□□□□ -0.44
SFSWAP-208ENST00000539506 GPR42O15529 346 aa12.33□□□□□ -0.44
SFSWAP-208ENST00000539506 AQP9O43315 295 aa12.33□□□□□ -0.44
SFSWAP-208ENST00000539506 C1QCP02747 245 aa12.33□□□□□ -0.44
SFSWAP-208ENST00000539506 ALPIP09923 528 aa12.33□□□□□ -0.44
SFSWAP-208ENST00000539506 G6PDP11413 515 aa12.33□□□□□ -0.44
SFSWAP-208ENST00000539506 TCEA1P23193 301 aaKnown RBP12.33□□□□□ -0.44
SFSWAP-208ENST00000539506 ZXDBP98169 803 aa12.33□□□□□ -0.44
SFSWAP-208ENST00000539506 BNIP2Q12982 314 aa12.33□□□□□ -0.44
SFSWAP-208ENST00000539506 CATSPEREQ5SY80 951 aa12.33□□□□□ -0.44
SFSWAP-208ENST00000539506 GPSM1Q86YR5 675 aa12.33□□□□□ -0.44
SFSWAP-208ENST00000539506 TBC1D21Q8IYX1 336 aa12.33□□□□□ -0.44
SFSWAP-208ENST00000539506 PACRGLQ8N7B6 248 aa12.33□□□□□ -0.44
SFSWAP-208ENST00000539506 WFDC5Q8TCV5 224 aa12.33□□□□□ -0.44
SFSWAP-208ENST00000539506 BARD1Q99728 777 aaKnown RBP12.33□□□□□ -0.44
SFSWAP-208ENST00000539506 P2RY12Q9H244 342 aa12.33□□□□□ -0.44
SFSWAP-208ENST00000539506 RASSF1Q9NS23 344 aa12.33□□□□□ -0.44
SFSWAP-208ENST00000539506 CD274Q9NZQ7 290 aa12.33□□□□□ -0.44
SFSWAP-208ENST00000539506 ERVK-18Q9QC07 812 aa12.33□□□□□ -0.44
SFSWAP-208ENST00000539506 SUN2Q9UH99 717 aa12.33□□□□□ -0.44
SFSWAP-208ENST00000539506 TRMT6Q9UJA5 497 aaKnown RBP12.33□□□□□ -0.44
SFSWAP-208ENST00000539506 GNPTGQ9UJJ9 305 aa12.33□□□□□ -0.44
SFSWAP-208ENST00000539506 ARIH1Q9Y4X5 557 aaPredicted RBP12.33□□□□□ -0.44
SFSWAP-208ENST00000539506 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.32□□□□□ -0.44
SFSWAP-208ENST00000539506 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.32□□□□□ -0.44
SFSWAP-208ENST00000539506 SOBPA7XYQ1 873 aa12.32□□□□□ -0.44
SFSWAP-208ENST00000539506 SYCE1LA8MT33 242 aa12.32□□□□□ -0.44
SFSWAP-208ENST00000539506 CLDN25C9JDP6 229 aa12.32□□□□□ -0.44
SFSWAP-208ENST00000539506 M0R3G1 203 aa12.32□□□□□ -0.44
SFSWAP-208ENST00000539506 UPK1AO00322 258 aa12.32□□□□□ -0.44
SFSWAP-208ENST00000539506 SNX2O60749 519 aa12.32□□□□□ -0.44
SFSWAP-208ENST00000539506 CNOT3O75175 753 aaKnown RBP12.32□□□□□ -0.44
SFSWAP-208ENST00000539506 VPS26AO75436 327 aa12.32□□□□□ -0.44
SFSWAP-208ENST00000539506 EEDO75530 441 aaKnown RBP12.32□□□□□ -0.44
SFSWAP-208ENST00000539506 SEC14L2O76054 403 aa12.32□□□□□ -0.44
SFSWAP-208ENST00000539506 CTPS1P17812 591 aa12.32□□□□□ -0.44
SFSWAP-208ENST00000539506 IL2P60568 153 aa12.32□□□□□ -0.44
SFSWAP-208ENST00000539506 ZNF177Q13360 481 aaPredicted RBP12.32□□□□□ -0.44
SFSWAP-208ENST00000539506 DAG1Q14118 895 aa12.32□□□□□ -0.44
SFSWAP-208ENST00000539506 PRMT9Q6P2P2 845 aa12.32□□□□□ -0.44
SFSWAP-208ENST00000539506 NCEH1Q6PIU2 408 aa12.32□□□□□ -0.44
SFSWAP-208ENST00000539506 PAGE2Q7Z2X7 111 aa12.32□□□□□ -0.44
SFSWAP-208ENST00000539506 SPATA19Q7Z5L4 167 aa12.32□□□□□ -0.44
SFSWAP-208ENST00000539506 ZDHHC13Q8IUH4 622 aa12.32□□□□□ -0.44
SFSWAP-208ENST00000539506 TMEM199Q8N511 208 aa12.32□□□□□ -0.44
SFSWAP-208ENST00000539506 NRBF2Q96F24 287 aa12.32□□□□□ -0.44
SFSWAP-208ENST00000539506 BOCQ9BWV1 1114 aa12.32□□□□□ -0.44
SFSWAP-208ENST00000539506 IKZF5Q9H5V7 419 aa12.32□□□□□ -0.44
SFSWAP-208ENST00000539506 ZFP14Q9HCL3 533 aa12.32□□□□□ -0.44
SFSWAP-208ENST00000539506 AMBNQ9NP70 447 aa12.32□□□□□ -0.44
SFSWAP-208ENST00000539506 FAM118AQ9NWS6 357 aa12.32□□□□□ -0.44
SFSWAP-208ENST00000539506 COMMD8Q9NX08 183 aa12.32□□□□□ -0.44
SFSWAP-208ENST00000539506 SMPD4Q9NXE4 827 aa12.32□□□□□ -0.44
SFSWAP-208ENST00000539506 LHX3Q9UBR4 397 aa12.32□□□□□ -0.44
SFSWAP-208ENST00000539506 SLCO3A1Q9UIG8 710 aa12.32□□□□□ -0.44
SFSWAP-208ENST00000539506 PDE10AQ9Y233 779 aa12.32□□□□□ -0.44
SFSWAP-208ENST00000539506 FCF1Q9Y324 198 aaKnown RBP12.32□□□□□ -0.44
SFSWAP-208ENST00000539506 NEUROG3Q9Y4Z2 214 aa12.32□□□□□ -0.44
SFSWAP-208ENST00000539506 GPC6Q9Y625 555 aaPredicted RBP12.32□□□□□ -0.44
SFSWAP-208ENST00000539506 GAPDHSO14556 408 aaPredicted RBP12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms