RNA–Protein interactions for RNA: ENST00000538120.5

CLIP1-210, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 3

Gene CLIP1, Length 2,472 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-210ENST00000538120 C9orf50Q5SZB4 431 aa10.53□□□□□ -0.72
CLIP1-210ENST00000538120 ADAMTSL2Q86TH1 951 aa10.53□□□□□ -0.72
CLIP1-210ENST00000538120 ZBTB2Q8N680 514 aa10.53□□□□□ -0.72
CLIP1-210ENST00000538120 CELF5Q8N6W0 485 aaKnown RBP10.53□□□□□ -0.72
CLIP1-210ENST00000538120 CIB1Q99828 191 aa10.53□□□□□ -0.72
CLIP1-210ENST00000538120 HEPHQ9BQS7 1158 aa10.53□□□□□ -0.72
CLIP1-210ENST00000538120 CAAP1Q9H8G2 361 aa10.53□□□□□ -0.72
CLIP1-210ENST00000538120 CCDC167Q9P0B6 97 aa10.53□□□□□ -0.72
CLIP1-210ENST00000538120 ZMYM5Q9UJ78 669 aa10.53□□□□□ -0.72
CLIP1-210ENST00000538120 A0A1W2PQ67 120 aa10.53□□□□□ -0.72
CLIP1-210ENST00000538120 ARHGAP10A1A4S6 786 aa10.53□□□□□ -0.72
CLIP1-210ENST00000538120 TSPAN11A1L157 253 aa10.53□□□□□ -0.72
CLIP1-210ENST00000538120 FFAR2O15552 330 aa10.53□□□□□ -0.72
CLIP1-210ENST00000538120 LEFTY1O75610 366 aa10.53□□□□□ -0.72
CLIP1-210ENST00000538120 PRR35P0CG20 571 aa10.53□□□□□ -0.72
CLIP1-210ENST00000538120 TIMP2P16035 220 aa10.53□□□□□ -0.72
CLIP1-210ENST00000538120 DGKAP23743 735 aa10.53□□□□□ -0.72
CLIP1-210ENST00000538120 ERVPABLB-1P60509 514 aa10.53□□□□□ -0.72
CLIP1-210ENST00000538120 PSME3P61289 254 aa10.53□□□□□ -0.72
CLIP1-210ENST00000538120 MESP2Q0VG99 397 aa10.53□□□□□ -0.72
CLIP1-210ENST00000538120 TMED1Q13445 227 aa10.53□□□□□ -0.72
CLIP1-210ENST00000538120 GPM6BQ13491 265 aa10.53□□□□□ -0.72
CLIP1-210ENST00000538120 XKR7Q5GH72 579 aa10.53□□□□□ -0.72
CLIP1-210ENST00000538120 PRPF38BQ5VTL8 546 aaKnown RBP10.53□□□□□ -0.72
CLIP1-210ENST00000538120 LAYNQ6UX15 382 aa10.53□□□□□ -0.72
CLIP1-210ENST00000538120 HSD11B1LQ7Z5J1 315 aa10.53□□□□□ -0.72
CLIP1-210ENST00000538120 DDIASQ8IXT1 998 aa10.53□□□□□ -0.72
CLIP1-210ENST00000538120 FAM160A2Q8N612 972 aaPredicted RBP10.53□□□□□ -0.72
CLIP1-210ENST00000538120 TRIML2Q8N7C3 387 aa10.53□□□□□ -0.72
CLIP1-210ENST00000538120 PDPRQ8NCN5 879 aa10.53□□□□□ -0.72
CLIP1-210ENST00000538120 OR52B6Q8NGF0 335 aa10.53□□□□□ -0.72
CLIP1-210ENST00000538120 OR56A4Q8NGH8 313 aa10.53□□□□□ -0.72
CLIP1-210ENST00000538120 HSPBAP1Q96EW2 488 aa10.53□□□□□ -0.72
CLIP1-210ENST00000538120 ACOX2Q99424 681 aa10.53□□□□□ -0.72
CLIP1-210ENST00000538120 NUSAP1Q9BXS6 441 aaKnown RBP10.53□□□□□ -0.72
CLIP1-210ENST00000538120 DUS2Q9NX74 493 aaKnown RBP10.53□□□□□ -0.72
CLIP1-210ENST00000538120 CD84Q9UIB8 345 aa10.53□□□□□ -0.72
CLIP1-210ENST00000538120 PTBP2Q9UKA9 531 aaKnown RBP10.53□□□□□ -0.72
CLIP1-210ENST00000538120 OARD1Q9Y530 152 aa10.53□□□□□ -0.72
CLIP1-210ENST00000538120 AP4S1Q9Y587 144 aa10.53□□□□□ -0.72
CLIP1-210ENST00000538120 SNX13Q9Y5W8 968 aa10.53□□□□□ -0.72
CLIP1-210ENST00000538120 LAMA3Q16787 3333 aa10.53□□□□□ -0.72
CLIP1-210ENST00000538120 PRORSD1PA6NEY8 169 aa10.52□□□□□ -0.72
CLIP1-210ENST00000538120 TRIM64CA6NLI5 447 aa10.52□□□□□ -0.72
CLIP1-210ENST00000538120 TRIM38O00635 465 aa10.52□□□□□ -0.72
CLIP1-210ENST00000538120 OR7A17O14581 309 aa10.52□□□□□ -0.72
CLIP1-210ENST00000538120 SLC9A3R1O14745 358 aaPredicted RBP10.52□□□□□ -0.72
CLIP1-210ENST00000538120 PAPLNO95428 1278 aa10.52□□□□□ -0.72
CLIP1-210ENST00000538120 SNRPB2P08579 225 aaKnown RBP10.52□□□□□ -0.72
CLIP1-210ENST00000538120 UROSP10746 265 aa10.52□□□□□ -0.72
CLIP1-210ENST00000538120 IMPDH2P12268 514 aa10.52□□□□□ -0.72
CLIP1-210ENST00000538120 CKMT2P17540 419 aa10.52□□□□□ -0.72
CLIP1-210ENST00000538120 NSG1P42857 185 aa10.52□□□□□ -0.72
CLIP1-210ENST00000538120 STT3AP46977 705 aa10.52□□□□□ -0.72
CLIP1-210ENST00000538120 ACADVLP49748 655 aa10.52□□□□□ -0.72
CLIP1-210ENST00000538120 RBBP7Q16576 425 aa10.52□□□□□ -0.72
CLIP1-210ENST00000538120 PHKG1Q16816 387 aa10.52□□□□□ -0.72
CLIP1-210ENST00000538120 REP15Q6BDI9 236 aa10.52□□□□□ -0.72
CLIP1-210ENST00000538120 PDE12Q6L8Q7 609 aaKnown RBP10.52□□□□□ -0.72
CLIP1-210ENST00000538120 HMBOX1Q6NT76 420 aa10.52□□□□□ -0.72
CLIP1-210ENST00000538120 BRAT1Q6PJG6 821 aa10.52□□□□□ -0.72
CLIP1-210ENST00000538120 GPRIN3Q6ZVF9 776 aa10.52□□□□□ -0.72
CLIP1-210ENST00000538120 VN1R2Q8NFZ6 395 aa10.52□□□□□ -0.72
CLIP1-210ENST00000538120 OSCP1Q8WVF1 389 aa10.52□□□□□ -0.72
CLIP1-210ENST00000538120 SMG7Q92540 1137 aaKnown RBP10.52□□□□□ -0.72
CLIP1-210ENST00000538120 ZNF597Q96LX8 424 aa10.52□□□□□ -0.72
CLIP1-210ENST00000538120 CDK15Q96Q40 435 aa10.52□□□□□ -0.72
CLIP1-210ENST00000538120 ZNF382Q96SR6 550 aa10.52□□□□□ -0.72
CLIP1-210ENST00000538120 COPS8Q99627 209 aa10.52□□□□□ -0.72
CLIP1-210ENST00000538120 SLC39A3Q9BRY0 314 aa10.52□□□□□ -0.72
CLIP1-210ENST00000538120 TMEM79Q9BSE2 394 aa10.52□□□□□ -0.72
CLIP1-210ENST00000538120 NSUN3Q9H649 340 aaKnown RBP10.52□□□□□ -0.72
CLIP1-210ENST00000538120 NOL11Q9H8H0 719 aaKnown RBP10.52□□□□□ -0.72
CLIP1-210ENST00000538120 PRDM9Q9NQV7 894 aa10.52□□□□□ -0.72
CLIP1-210ENST00000538120 OLAHQ9NV23 265 aa10.52□□□□□ -0.72
CLIP1-210ENST00000538120 MRGBPQ9NV56 204 aa10.52□□□□□ -0.72
CLIP1-210ENST00000538120 CACNA2D2Q9NY47 1150 aa10.52□□□□□ -0.72
CLIP1-210ENST00000538120 RSL24D1Q9UHA3 163 aaKnown RBP10.52□□□□□ -0.72
CLIP1-210ENST00000538120 SARDHQ9UL12 918 aa10.52□□□□□ -0.72
CLIP1-210ENST00000538120 HOXC11O43248 304 aaPredicted RBP10.52□□□□□ -0.73
CLIP1-210ENST00000538120 OR4F21O95013 312 aa10.52□□□□□ -0.73
CLIP1-210ENST00000538120 ADH1BP00325 375 aa10.52□□□□□ -0.73
CLIP1-210ENST00000538120 ADH5P11766 374 aa10.52□□□□□ -0.73
CLIP1-210ENST00000538120 VIPR1P32241 457 aa10.52□□□□□ -0.73
CLIP1-210ENST00000538120 CCR7P32248 378 aa10.52□□□□□ -0.73
CLIP1-210ENST00000538120 RGS4P49798 205 aa10.52□□□□□ -0.73
CLIP1-210ENST00000538120 POLR2LP62875 67 aaKnown RBP10.52□□□□□ -0.73
CLIP1-210ENST00000538120 STX5Q13190 355 aa10.52□□□□□ -0.73
CLIP1-210ENST00000538120 TRIM25Q14258 630 aaKnown RBP10.52□□□□□ -0.73
CLIP1-210ENST00000538120 GAB4Q2WGN9 574 aa10.52□□□□□ -0.73
CLIP1-210ENST00000538120 LETMD1Q6P1Q0 360 aa10.52□□□□□ -0.73
CLIP1-210ENST00000538120 BORAQ6PGQ7 559 aa10.52□□□□□ -0.73
CLIP1-210ENST00000538120 SCIMPQ6UWF3 145 aa10.52□□□□□ -0.73
CLIP1-210ENST00000538120 TMC5Q6UXY8 1006 aa10.52□□□□□ -0.73
CLIP1-210ENST00000538120 FRA10AC1Q70Z53 315 aa10.52□□□□□ -0.73
CLIP1-210ENST00000538120 GOLGA7Q7Z5G4 137 aa10.52□□□□□ -0.73
CLIP1-210ENST00000538120 RETREG3Q86VR2 466 aa10.52□□□□□ -0.73
CLIP1-210ENST00000538120 DCBLD1Q8N8Z6 715 aa10.52□□□□□ -0.73
CLIP1-210ENST00000538120 OR2T11Q8NH01 316 aa10.52□□□□□ -0.73
CLIP1-210ENST00000538120 TUBGCP3Q96CW5 907 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms