RNA–Protein interactions for RNA: ENST00000537408.1

CLSTN3-207, Transcript of calsyntenin 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLSTN3, Length 4,296 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-207ENST00000537408 HUS1O60921 280 aa10.7□□□□□ -0.7
CLSTN3-207ENST00000537408 CDK14O94921 469 aa10.7□□□□□ -0.7
CLSTN3-207ENST00000537408 IFNA7P01567 189 aa10.7□□□□□ -0.7
CLSTN3-207ENST00000537408 ADORA3P0DMS8 318 aa10.7□□□□□ -0.7
CLSTN3-207ENST00000537408 CTSKP43235 329 aa10.7□□□□□ -0.7
CLSTN3-207ENST00000537408 MAGEA6P43360 314 aa10.7□□□□□ -0.7
CLSTN3-207ENST00000537408 DDR2Q16832 855 aa10.7□□□□□ -0.7
CLSTN3-207ENST00000537408 STEAP4Q687X5 459 aa10.7□□□□□ -0.7
CLSTN3-207ENST00000537408 SLC22A15Q8IZD6 547 aa10.7□□□□□ -0.7
CLSTN3-207ENST00000537408 PLD5Q8N7P1 536 aa10.7□□□□□ -0.7
CLSTN3-207ENST00000537408 RPL3LQ92901 407 aaKnown RBP10.7□□□□□ -0.7
CLSTN3-207ENST00000537408 ELMO3Q96BJ8 720 aa10.7□□□□□ -0.7
CLSTN3-207ENST00000537408 SLC17A6Q9P2U8 582 aa10.7□□□□□ -0.7
CLSTN3-207ENST00000537408 ING4Q9UNL4 249 aa10.7□□□□□ -0.7
CLSTN3-207ENST00000537408 PRG3Q9Y2Y8 225 aaPredicted RBP10.7□□□□□ -0.7
CLSTN3-207ENST00000537408 HRH3Q9Y5N1 445 aa10.7□□□□□ -0.7
CLSTN3-207ENST00000537408 BCKDKO14874 412 aa10.7□□□□□ -0.7
CLSTN3-207ENST00000537408 TREHO43280 583 aa10.7□□□□□ -0.7
CLSTN3-207ENST00000537408 HS6ST1O60243 411 aa10.7□□□□□ -0.7
CLSTN3-207ENST00000537408 PRKCGP05129 697 aa10.7□□□□□ -0.7
CLSTN3-207ENST00000537408 ALPLP05186 524 aa10.7□□□□□ -0.7
CLSTN3-207ENST00000537408 RPS17P08708 135 aaKnown RBP10.7□□□□□ -0.7
CLSTN3-207ENST00000537408 MTHFD1P11586 935 aaKnown RBP10.7□□□□□ -0.7
CLSTN3-207ENST00000537408 AP1S2P56377 157 aa10.7□□□□□ -0.7
CLSTN3-207ENST00000537408 FOXM1Q08050 763 aa10.7□□□□□ -0.7
CLSTN3-207ENST00000537408 CUL2Q13617 745 aa10.7□□□□□ -0.7
CLSTN3-207ENST00000537408 VEPH1Q14D04 833 aa10.7□□□□□ -0.7
CLSTN3-207ENST00000537408 SMAD1Q15797 465 aaKnown RBP10.7□□□□□ -0.7
CLSTN3-207ENST00000537408 AANATQ16613 207 aa10.7□□□□□ -0.7
CLSTN3-207ENST00000537408 DCAF4L1Q3SXM0 396 aa10.7□□□□□ -0.7
CLSTN3-207ENST00000537408 SVOPLQ8N434 492 aa10.7□□□□□ -0.7
CLSTN3-207ENST00000537408 AP2M1Q96CW1 435 aa10.7□□□□□ -0.7
CLSTN3-207ENST00000537408 SGTBQ96EQ0 304 aa10.7□□□□□ -0.7
CLSTN3-207ENST00000537408 TTLL2Q9BWV7 592 aa10.7□□□□□ -0.7
CLSTN3-207ENST00000537408 HDHD5Q9BXW7 423 aa10.7□□□□□ -0.7
CLSTN3-207ENST00000537408 ZNF518BQ9C0D4 1074 aa10.7□□□□□ -0.7
CLSTN3-207ENST00000537408 TRIM45Q9H8W5 580 aaPredicted RBP10.7□□□□□ -0.7
CLSTN3-207ENST00000537408 VAV3Q9UKW4 847 aa10.7□□□□□ -0.7
CLSTN3-207ENST00000537408 CDH9Q9ULB4 789 aa10.7□□□□□ -0.7
CLSTN3-207ENST00000537408 RAB23Q9ULC3 237 aa10.7□□□□□ -0.7
CLSTN3-207ENST00000537408 A0A087WZ62 844 aa10.69□□□□□ -0.7
CLSTN3-207ENST00000537408 LOC100130705A0A1B0GUX0 176 aa10.69□□□□□ -0.7
CLSTN3-207ENST00000537408 SSX4O60224 188 aa10.69□□□□□ -0.7
CLSTN3-207ENST00000537408 F2P00734 622 aa10.69□□□□□ -0.7
CLSTN3-207ENST00000537408 RPLP0P05388 317 aaKnown RBP10.69□□□□□ -0.7
CLSTN3-207ENST00000537408 ACADMP11310 421 aa10.69□□□□□ -0.7
CLSTN3-207ENST00000537408 LAG3P18627 525 aa10.69□□□□□ -0.7
CLSTN3-207ENST00000537408 HDCP19113 662 aa10.69□□□□□ -0.7
CLSTN3-207ENST00000537408 CD52P31358 61 aa10.69□□□□□ -0.7
CLSTN3-207ENST00000537408 NDUFV1P49821 464 aa10.69□□□□□ -0.7
CLSTN3-207ENST00000537408 DGKQP52824 942 aa10.69□□□□□ -0.7
CLSTN3-207ENST00000537408 ZNF252P-AS1Q0IIN9 211 aa10.69□□□□□ -0.7
CLSTN3-207ENST00000537408 CDO1Q16878 200 aa10.69□□□□□ -0.7
CLSTN3-207ENST00000537408 FAM209BQ5JX69 171 aa10.69□□□□□ -0.7
CLSTN3-207ENST00000537408 UFD1Q92890 307 aa10.69□□□□□ -0.7
CLSTN3-207ENST00000537408 C12orf57Q99622 126 aa10.69□□□□□ -0.7
CLSTN3-207ENST00000537408 FDXACB1Q9BRP7 624 aaPredicted RBP10.69□□□□□ -0.7
CLSTN3-207ENST00000537408 IGFLR1Q9H665 355 aa10.69□□□□□ -0.7
CLSTN3-207ENST00000537408 LRRC4Q9HBW1 653 aa10.69□□□□□ -0.7
CLSTN3-207ENST00000537408 ZBTB20Q9HC78 741 aaPredicted RBP10.69□□□□□ -0.7
CLSTN3-207ENST00000537408 CPNE7Q9UBL6 633 aa10.69□□□□□ -0.7
CLSTN3-207ENST00000537408 MAPRE3Q9UPY8 281 aa10.69□□□□□ -0.7
CLSTN3-207ENST00000537408 SNX8Q9Y5X2 465 aa10.69□□□□□ -0.7
CLSTN3-207ENST00000537408 NPHS1O60500 1241 aa10.69□□□□□ -0.7
CLSTN3-207ENST00000537408 APOC1P02654 83 aa10.69□□□□□ -0.7
CLSTN3-207ENST00000537408 ZNF250P15622 560 aa10.69□□□□□ -0.7
CLSTN3-207ENST00000537408 SAT1P21673 171 aa10.69□□□□□ -0.7
CLSTN3-207ENST00000537408 RPS3P23396 243 aaKnown RBP eCLIP10.69□□□□□ -0.74e-7■■■■□ 22.7
CLSTN3-207ENST00000537408 HLA-DMAP28067 261 aa10.69□□□□□ -0.7
CLSTN3-207ENST00000537408 ATP4BP51164 291 aa10.69□□□□□ -0.7
CLSTN3-207ENST00000537408 GBX2P52951 348 aaPredicted RBP10.69□□□□□ -0.7
CLSTN3-207ENST00000537408 TAPT1Q6NXT6 567 aa10.69□□□□□ -0.7
CLSTN3-207ENST00000537408 TMEM81Q6P7N7 255 aa10.69□□□□□ -0.7
CLSTN3-207ENST00000537408 FAM35AQ86V20 835 aa10.69□□□□□ -0.7
CLSTN3-207ENST00000537408 P3H2Q8IVL5 708 aa10.69□□□□□ -0.7
CLSTN3-207ENST00000537408 PLD6Q8N2A8 252 aaKnown RBP10.69□□□□□ -0.7
CLSTN3-207ENST00000537408 MINDY1Q8N5J2 469 aa10.69□□□□□ -0.7
CLSTN3-207ENST00000537408 AADATQ8N5Z0 425 aa10.69□□□□□ -0.7
CLSTN3-207ENST00000537408 ASB12Q8WXK4 309 aa10.69□□□□□ -0.7
CLSTN3-207ENST00000537408 ST8SIA2Q92186 375 aa10.69□□□□□ -0.7
CLSTN3-207ENST00000537408 INTS12Q96CB8 462 aaKnown RBP10.69□□□□□ -0.7
CLSTN3-207ENST00000537408 RBBP8Q99708 897 aa10.69□□□□□ -0.7
CLSTN3-207ENST00000537408 SLC30A3Q99726 388 aa10.69□□□□□ -0.7
CLSTN3-207ENST00000537408 RNF6Q9Y252 685 aa10.69□□□□□ -0.7
CLSTN3-207ENST00000537408 LOC100506127A0A0U1RQW1 187 aa10.69□□□□□ -0.7
CLSTN3-207ENST00000537408 AKR7A2O43488 359 aa10.69□□□□□ -0.7
CLSTN3-207ENST00000537408 ADAM11O75078 769 aa10.69□□□□□ -0.7
CLSTN3-207ENST00000537408 PPM1BO75688 479 aa10.69□□□□□ -0.7
CLSTN3-207ENST00000537408 MLNP12872 115 aa10.69□□□□□ -0.7
CLSTN3-207ENST00000537408 ZNF30P17039 623 aa10.69□□□□□ -0.7
CLSTN3-207ENST00000537408 LIMK2P53671 638 aa10.69□□□□□ -0.7
CLSTN3-207ENST00000537408 OGDHQ02218 1023 aa10.69□□□□□ -0.7
CLSTN3-207ENST00000537408 SEMA5AQ13591 1074 aa10.69□□□□□ -0.7
CLSTN3-207ENST00000537408 HSD17B12Q53GQ0 312 aa10.69□□□□□ -0.7
CLSTN3-207ENST00000537408 SPANXN3Q5MJ09 141 aa10.69□□□□□ -0.7
CLSTN3-207ENST00000537408 PIWIL4Q7Z3Z4 852 aaKnown RBP10.69□□□□□ -0.7
CLSTN3-207ENST00000537408 TRIM48Q8IWZ4 208 aa10.69□□□□□ -0.7
CLSTN3-207ENST00000537408 PAPD5Q8NDF8 572 aaKnown RBP10.69□□□□□ -0.7
CLSTN3-207ENST00000537408 OR7G3Q8NG95 312 aa10.69□□□□□ -0.7
CLSTN3-207ENST00000537408 MFSD3Q96ES6 412 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms