RNA–Protein interactions for RNA: ENST00000534830.5

CLSTN3-203, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-203ENST00000534830 SLC34A3Q8N130 599 aa9.78□□□□□ -0.84
CLSTN3-203ENST00000534830 ACVR1CQ8NER5 493 aa9.78□□□□□ -0.84
CLSTN3-203ENST00000534830 UBE2Q2Q8WVN8 375 aa9.78□□□□□ -0.84
CLSTN3-203ENST00000534830 ZNF501Q96CX3 271 aaPredicted RBP9.78□□□□□ -0.84
CLSTN3-203ENST00000534830 STAMBPL1Q96FJ0 436 aa9.78□□□□□ -0.84
CLSTN3-203ENST00000534830 DCUN1D1Q96GG9 259 aa9.78□□□□□ -0.84
CLSTN3-203ENST00000534830 ELMO2Q96JJ3 720 aa9.78□□□□□ -0.84
CLSTN3-203ENST00000534830 PPM1MQ96MI6 270 aa9.78□□□□□ -0.84
CLSTN3-203ENST00000534830 DESI2Q9BSY9 194 aa9.78□□□□□ -0.84
CLSTN3-203ENST00000534830 TWSG1Q9GZX9 223 aa9.78□□□□□ -0.84
CLSTN3-203ENST00000534830 TFB2MQ9H5Q4 396 aaKnown RBP9.78□□□□□ -0.84
CLSTN3-203ENST00000534830 COG4Q9H9E3 785 aa9.78□□□□□ -0.84
CLSTN3-203ENST00000534830 LATS2Q9NRM7 1088 aa9.78□□□□□ -0.84
CLSTN3-203ENST00000534830 KCND3Q9UK17 655 aa9.78□□□□□ -0.84
CLSTN3-203ENST00000534830 RARRES3Q9UL19 164 aa9.78□□□□□ -0.84
CLSTN3-203ENST00000534830 PADI1Q9ULC6 663 aa9.78□□□□□ -0.84
CLSTN3-203ENST00000534830 SLC5A6Q9Y289 635 aa9.78□□□□□ -0.84
CLSTN3-203ENST00000534830 DIDO1Q9BTC0 2240 aaKnown RBP9.77□□□□□ -0.85
CLSTN3-203ENST00000534830 UBA6A0AVT1 1052 aaPredicted RBP9.77□□□□□ -0.85
CLSTN3-203ENST00000534830 PIPSLA2A3N6 862 aa9.77□□□□□ -0.85
CLSTN3-203ENST00000534830 C21orf140B9A014 251 aa9.77□□□□□ -0.85
CLSTN3-203ENST00000534830 CFAP99D6REC4 459 aa9.77□□□□□ -0.85
CLSTN3-203ENST00000534830 CREG1O75629 220 aa9.77□□□□□ -0.85
CLSTN3-203ENST00000534830 SORBS2O94875 1100 aaKnown RBP9.77□□□□□ -0.85
CLSTN3-203ENST00000534830 SUN1O94901 812 aa9.77□□□□□ -0.85
CLSTN3-203ENST00000534830 AP2A2O94973 939 aa9.77□□□□□ -0.85
CLSTN3-203ENST00000534830 GSTM1P09488 218 aa9.77□□□□□ -0.85
CLSTN3-203ENST00000534830 SLC35G4P0C7Q5 338 aa9.77□□□□□ -0.85
CLSTN3-203ENST00000534830 CCNYL3P0C7X3 344 aa9.77□□□□□ -0.85
CLSTN3-203ENST00000534830 MSL3P1P0C860 447 aa9.77□□□□□ -0.85
CLSTN3-203ENST00000534830 POLR2CP19387 275 aaPredicted RBP9.77□□□□□ -0.85
CLSTN3-203ENST00000534830 STIP1P31948 543 aaKnown RBP9.77□□□□□ -0.85
CLSTN3-203ENST00000534830 FOXN2P32314 431 aa9.77□□□□□ -0.85
CLSTN3-203ENST00000534830 TUBB4BP68371 445 aa9.77□□□□□ -0.85
CLSTN3-203ENST00000534830 GSTM4Q03013 218 aa9.77□□□□□ -0.85
CLSTN3-203ENST00000534830 CACNG1Q06432 222 aa9.77□□□□□ -0.85
CLSTN3-203ENST00000534830 RPA4Q13156 261 aa9.77□□□□□ -0.85
CLSTN3-203ENST00000534830 TUBB2AQ13885 445 aa9.77□□□□□ -0.85
CLSTN3-203ENST00000534830 POU6F1Q14863 301 aa9.77□□□□□ -0.85
CLSTN3-203ENST00000534830 DBN1Q16643 649 aa9.77□□□□□ -0.85
CLSTN3-203ENST00000534830 ZRANB3Q5FWF4 1079 aa9.77□□□□□ -0.85
CLSTN3-203ENST00000534830 PACS1Q6VY07 963 aa9.77□□□□□ -0.85
CLSTN3-203ENST00000534830 TXLNBQ8N3L3 684 aa9.77□□□□□ -0.85
CLSTN3-203ENST00000534830 OR4E2Q8NGC2 313 aa9.77□□□□□ -0.85
CLSTN3-203ENST00000534830 OR13J1Q8NGT2 312 aa9.77□□□□□ -0.85
CLSTN3-203ENST00000534830 OR8K5Q8NH50 307 aa9.77□□□□□ -0.85
CLSTN3-203ENST00000534830 CT55Q8WUE5 264 aa9.77□□□□□ -0.85
CLSTN3-203ENST00000534830 LRRC45Q96CN5 670 aa9.77□□□□□ -0.85
CLSTN3-203ENST00000534830 NRTNQ99748 197 aa9.77□□□□□ -0.85
CLSTN3-203ENST00000534830 SLC25A23Q9BV35 468 aa9.77□□□□□ -0.85
CLSTN3-203ENST00000534830 TUBB2BQ9BVA1 445 aa9.77□□□□□ -0.85
CLSTN3-203ENST00000534830 TRIM55Q9BYV6 548 aa9.77□□□□□ -0.85
CLSTN3-203ENST00000534830 ETNK1Q9HBU6 452 aa9.77□□□□□ -0.85
CLSTN3-203ENST00000534830 SLAMF7Q9NQ25 335 aa9.77□□□□□ -0.85
CLSTN3-203ENST00000534830 C1GALT1Q9NS00 363 aa9.77□□□□□ -0.85
CLSTN3-203ENST00000534830 FGF21Q9NSA1 209 aa9.77□□□□□ -0.85
CLSTN3-203ENST00000534830 LNPEPQ9UIQ6 1025 aa9.77□□□□□ -0.85
CLSTN3-203ENST00000534830 POMT2Q9UKY4 750 aa9.77□□□□□ -0.85
CLSTN3-203ENST00000534830 RIMKLBQ9ULI2 386 aa9.77□□□□□ -0.85
CLSTN3-203ENST00000534830 PRSS21Q9Y6M0 314 aa9.77□□□□□ -0.85
CLSTN3-203ENST00000534830 ANKRD12Q6UB98 2062 aa9.77□□□□□ -0.85
CLSTN3-203ENST00000534830 CELSR1Q9NYQ6 3014 aa9.77□□□□□ -0.85
CLSTN3-203ENST00000534830 MED13LQ71F56 2210 aa9.76□□□□□ -0.85
CLSTN3-203ENST00000534830 ERI2A8K979 691 aaKnown RBP9.76□□□□□ -0.85
CLSTN3-203ENST00000534830 MATN2O00339 956 aa9.76□□□□□ -0.85
CLSTN3-203ENST00000534830 BTN3A3O00478 584 aa9.76□□□□□ -0.85
CLSTN3-203ENST00000534830 BTN3A1O00481 513 aa9.76□□□□□ -0.85
CLSTN3-203ENST00000534830 LIASO43766 372 aa9.76□□□□□ -0.85
CLSTN3-203ENST00000534830 ACADLP28330 430 aa9.76□□□□□ -0.85
CLSTN3-203ENST00000534830 PRDX3P30048 256 aaKnown RBP9.76□□□□□ -0.85
CLSTN3-203ENST00000534830 FDFT1P37268 417 aa9.76□□□□□ -0.85
CLSTN3-203ENST00000534830 NSG1P42857 185 aa9.76□□□□□ -0.85
CLSTN3-203ENST00000534830 ACVR1Q04771 509 aa9.76□□□□□ -0.85
CLSTN3-203ENST00000534830 SEMA5AQ13591 1074 aa9.76□□□□□ -0.85
CLSTN3-203ENST00000534830 DNASE1L3Q13609 305 aa9.76□□□□□ -0.85
CLSTN3-203ENST00000534830 BOP1Q14137 746 aaKnown RBP9.76□□□□□ -0.85
CLSTN3-203ENST00000534830 ITIH4Q14624 930 aa9.76□□□□□ -0.85
CLSTN3-203ENST00000534830 GSE1Q14687 1217 aa9.76□□□□□ -0.85
CLSTN3-203ENST00000534830 NR6A1Q15406 480 aa9.76□□□□□ -0.85
CLSTN3-203ENST00000534830 ZNF789Q5FWF6 425 aa9.76□□□□□ -0.85
CLSTN3-203ENST00000534830 FBXO38Q6PIJ6 1188 aa9.76□□□□□ -0.85
CLSTN3-203ENST00000534830 LINC00523Q86TU6 105 aa9.76□□□□□ -0.85
CLSTN3-203ENST00000534830 SLC13A5Q86YT5 568 aaPredicted RBP9.76□□□□□ -0.85
CLSTN3-203ENST00000534830 APLFQ8IW19 511 aaPredicted RBP9.76□□□□□ -0.85
CLSTN3-203ENST00000534830 ADGRF3Q8IZF5 1079 aa9.76□□□□□ -0.85
CLSTN3-203ENST00000534830 CLDN19Q8N6F1 224 aa9.76□□□□□ -0.85
CLSTN3-203ENST00000534830 SLC38A9Q8NBW4 561 aa9.76□□□□□ -0.85
CLSTN3-203ENST00000534830 OR52K1Q8NGK4 314 aa9.76□□□□□ -0.85
CLSTN3-203ENST00000534830 ATG4AQ8WYN0 398 aa9.76□□□□□ -0.85
CLSTN3-203ENST00000534830 SGSM3Q96HU1 749 aa9.76□□□□□ -0.85
CLSTN3-203ENST00000534830 LRFN5Q96NI6 719 aa9.76□□□□□ -0.85
CLSTN3-203ENST00000534830 FERD3LQ96RJ6 166 aa9.76□□□□□ -0.85
CLSTN3-203ENST00000534830 RANBP9Q96S59 729 aa9.76□□□□□ -0.85
CLSTN3-203ENST00000534830 RUFY1Q96T51 708 aa9.76□□□□□ -0.85
CLSTN3-203ENST00000534830 GPR87Q9BY21 358 aa9.76□□□□□ -0.85
CLSTN3-203ENST00000534830 MFRPQ9BY79 579 aa9.76□□□□□ -0.85
CLSTN3-203ENST00000534830 FRMD8P1Q9BZ68 369 aaPredicted RBP9.76□□□□□ -0.85
CLSTN3-203ENST00000534830 PITPNM3Q9BZ71 974 aa9.76□□□□□ -0.85
CLSTN3-203ENST00000534830 UNKQ9C0B0 810 aaKnown RBP9.76□□□□□ -0.85
CLSTN3-203ENST00000534830 MVB12BQ9H7P6 319 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms