RNA–Protein interactions for RNA: ENST00000533820.5

CAPN1-226, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-226ENST00000533820 C8orf48Q96LL4 319 aa18.98■□□□□ 0.63
CAPN1-226ENST00000533820 GPR62Q9BZJ7 368 aa18.98■□□□□ 0.63
CAPN1-226ENST00000533820 FAM118AQ9NWS6 357 aa18.98■□□□□ 0.63
CAPN1-226ENST00000533820 ANGPTL3Q9Y5C1 460 aa18.98■□□□□ 0.63
CAPN1-226ENST00000533820 H0Y626 953 aa18.98■□□□□ 0.63
CAPN1-226ENST00000533820 TRIM16O95361 564 aa18.98■□□□□ 0.63
CAPN1-226ENST00000533820 C7P10643 843 aa18.98■□□□□ 0.63
CAPN1-226ENST00000533820 PERM1Q5SV97 790 aa18.98■□□□□ 0.63
CAPN1-226ENST00000533820 TXNDC11Q6PKC3 985 aa18.98■□□□□ 0.63
CAPN1-226ENST00000533820 MBOAT1Q6ZNC8 495 aa18.98■□□□□ 0.63
CAPN1-226ENST00000533820 EFL1Q7Z2Z2 1120 aaKnown RBP18.98■□□□□ 0.63
CAPN1-226ENST00000533820 SPARTQ8N0X7 666 aa18.98■□□□□ 0.63
CAPN1-226ENST00000533820 PDPRQ8NCN5 879 aa18.98■□□□□ 0.63
CAPN1-226ENST00000533820 ZNF382Q96SR6 550 aa18.98■□□□□ 0.63
CAPN1-226ENST00000533820 MGME1Q9BQP7 344 aa18.98■□□□□ 0.63
CAPN1-226ENST00000533820 BOCQ9BWV1 1114 aa18.98■□□□□ 0.63
CAPN1-226ENST00000533820 SLC6A13Q9NSD5 602 aa18.98■□□□□ 0.63
CAPN1-226ENST00000533820 ZNF639Q9UID6 485 aa18.98■□□□□ 0.63
CAPN1-226ENST00000533820 PCDHB9Q9Y5E1 797 aa18.98■□□□□ 0.63
CAPN1-226ENST00000533820 INMTO95050 263 aa18.97■□□□□ 0.63
CAPN1-226ENST00000533820 GJB5O95377 273 aa18.97■□□□□ 0.63
CAPN1-226ENST00000533820 GGT1P19440 569 aa18.97■□□□□ 0.63
CAPN1-226ENST00000533820 CRY1Q16526 586 aa18.97■□□□□ 0.63
CAPN1-226ENST00000533820 TRIM16LQ309B1 348 aa18.97■□□□□ 0.63
CAPN1-226ENST00000533820 FAM151BQ6UXP7 276 aa18.97■□□□□ 0.63
CAPN1-226ENST00000533820 TMEM179BQ7Z7N9 219 aa18.97■□□□□ 0.63
CAPN1-226ENST00000533820 FAM20CQ8IXL6 584 aa18.97■□□□□ 0.63
CAPN1-226ENST00000533820 SLC47A1Q96FL8 570 aa18.97■□□□□ 0.63
CAPN1-226ENST00000533820 PSKH2Q96QS6 385 aa18.97■□□□□ 0.63
CAPN1-226ENST00000533820 ACTR8Q9H981 624 aa18.97■□□□□ 0.63
CAPN1-226ENST00000533820 PCDH12Q9NPG4 1184 aa18.97■□□□□ 0.63
CAPN1-226ENST00000533820 ANKRD66B4E2M5 251 aa18.97■□□□□ 0.63
CAPN1-226ENST00000533820 OAZ2O95190 189 aa18.97■□□□□ 0.63
CAPN1-226ENST00000533820 TTPAP49638 278 aa18.97■□□□□ 0.63
CAPN1-226ENST00000533820 GATMP50440 423 aa18.97■□□□□ 0.63
CAPN1-226ENST00000533820 CD47Q08722 323 aa18.97■□□□□ 0.63
CAPN1-226ENST00000533820 MAPKAPK3Q16644 382 aa18.97■□□□□ 0.63
CAPN1-226ENST00000533820 SLC22A15Q8IZD6 547 aa18.97■□□□□ 0.63
CAPN1-226ENST00000533820 C2orf69Q8N8R5 385 aa18.97■□□□□ 0.63
CAPN1-226ENST00000533820 NRBF2Q96F24 287 aa18.97■□□□□ 0.63
CAPN1-226ENST00000533820 UROC1Q96N76 676 aa18.97■□□□□ 0.63
CAPN1-226ENST00000533820 HERC2P3Q9BVR0 1158 aa18.97■□□□□ 0.63
CAPN1-226ENST00000533820 H0YAE9 185 aa18.97■□□□□ 0.63
CAPN1-226ENST00000533820 TBC1D4O60343 1298 aa18.97■□□□□ 0.63
CAPN1-226ENST00000533820 HTR1AP08908 422 aa18.97■□□□□ 0.63
CAPN1-226ENST00000533820 CA5AP35218 305 aa18.97■□□□□ 0.63
CAPN1-226ENST00000533820 PWP1Q13610 501 aa18.97■□□□□ 0.63
CAPN1-226ENST00000533820 PTRHD1Q6GMV3 140 aaKnown RBP18.97■□□□□ 0.63
CAPN1-226ENST00000533820 CRTC3Q6UUV7 619 aa18.97■□□□□ 0.63
CAPN1-226ENST00000533820 C10orf111Q8N326 155 aa18.97■□□□□ 0.63
CAPN1-226ENST00000533820 CNIH3Q8TBE1 160 aa18.97■□□□□ 0.63
CAPN1-226ENST00000533820 SLC13A3Q8WWT9 602 aa18.97■□□□□ 0.63
CAPN1-226ENST00000533820 PEX13Q92968 403 aa18.97■□□□□ 0.63
CAPN1-226ENST00000533820 FUNDC2Q9BWH2 189 aa18.97■□□□□ 0.63
CAPN1-226ENST00000533820 CIPCQ9C0C6 399 aa18.97■□□□□ 0.63
CAPN1-226ENST00000533820 HPS4Q9NQG7 708 aa18.97■□□□□ 0.63
CAPN1-226ENST00000533820 PATJQ8NI35 1801 aa18.96■□□□□ 0.63
CAPN1-226ENST00000533820 ABCB7O75027 752 aa18.96■□□□□ 0.63
CAPN1-226ENST00000533820 MITFO75030 526 aaPredicted RBP18.96■□□□□ 0.63
CAPN1-226ENST00000533820 INHBBP09529 407 aa18.96■□□□□ 0.63
CAPN1-226ENST00000533820 MAPKAPK2P49137 400 aa18.96■□□□□ 0.63
CAPN1-226ENST00000533820 AQP6Q13520 282 aa18.96■□□□□ 0.63
CAPN1-226ENST00000533820 KCNA10Q16322 511 aa18.96■□□□□ 0.63
CAPN1-226ENST00000533820 MOGQ16653 247 aa18.96■□□□□ 0.63
CAPN1-226ENST00000533820 ATXN7L2Q5T6C5 722 aaPredicted RBP18.96■□□□□ 0.63
CAPN1-226ENST00000533820 ZNF555Q8NEP9 628 aa18.96■□□□□ 0.63
CAPN1-226ENST00000533820 FATE1Q969F0 183 aa18.96■□□□□ 0.63
CAPN1-226ENST00000533820 RNF38Q9H0F5 515 aa18.96■□□□□ 0.63
CAPN1-226ENST00000533820 RETREG1Q9H6L5 497 aa18.96■□□□□ 0.63
CAPN1-226ENST00000533820 SOBPA7XYQ1 873 aa18.96■□□□□ 0.63
CAPN1-226ENST00000533820 CFAP99D6REC4 459 aa18.96■□□□□ 0.63
CAPN1-226ENST00000533820 SEC22BO75396 215 aa18.96■□□□□ 0.63
CAPN1-226ENST00000533820 CPNE6O95741 557 aa18.96■□□□□ 0.63
CAPN1-226ENST00000533820 RHOCP08134 193 aa18.96■□□□□ 0.63
CAPN1-226ENST00000533820 DDX5P17844 614 aaKnown RBP18.96■□□□□ 0.63
CAPN1-226ENST00000533820 RPS3AP61247 264 aaKnown RBP18.96■□□□□ 0.63
CAPN1-226ENST00000533820 GRIK2Q13002 908 aa18.96■□□□□ 0.63
CAPN1-226ENST00000533820 RGS21Q2M5E4 152 aa18.96■□□□□ 0.63
CAPN1-226ENST00000533820 C6orf141Q5SZD1 244 aa18.96■□□□□ 0.63
CAPN1-226ENST00000533820 GALNT10Q86SR1 603 aa18.96■□□□□ 0.63
CAPN1-226ENST00000533820 LIX1Q8N485 282 aa18.96■□□□□ 0.63
CAPN1-226ENST00000533820 CHDHQ8NE62 594 aaPredicted RBP18.96■□□□□ 0.63
CAPN1-226ENST00000533820 MBOAT4Q96T53 435 aa18.96■□□□□ 0.63
CAPN1-226ENST00000533820 GPR63Q9BZJ6 419 aa18.96■□□□□ 0.63
CAPN1-226ENST00000533820 TM6SF2Q9BZW4 377 aa18.96■□□□□ 0.63
CAPN1-226ENST00000533820 RAD21L1Q9H4I0 556 aa18.96■□□□□ 0.63
CAPN1-226ENST00000533820 PSME2Q9UL46 239 aa18.96■□□□□ 0.63
CAPN1-226ENST00000533820 PDE10AQ9Y233 779 aa18.96■□□□□ 0.63
CAPN1-226ENST00000533820 Q9Y3F1 56 aa18.96■□□□□ 0.63
CAPN1-226ENST00000533820 ST14Q9Y5Y6 855 aa18.96■□□□□ 0.63
CAPN1-226ENST00000533820 SEC14L2O76054 403 aa18.95■□□□□ 0.62
CAPN1-226ENST00000533820 PRKACBP22694 351 aa18.95■□□□□ 0.62
CAPN1-226ENST00000533820 CTGFP29279 349 aa18.95■□□□□ 0.62
CAPN1-226ENST00000533820 RAD23AP54725 363 aa18.95■□□□□ 0.62
CAPN1-226ENST00000533820 CYP4F3Q08477 520 aa18.95■□□□□ 0.62
CAPN1-226ENST00000533820 VAC14Q08AM6 782 aa18.95■□□□□ 0.62
CAPN1-226ENST00000533820 DET1Q7L5Y6 550 aa18.95■□□□□ 0.62
CAPN1-226ENST00000533820 DPY30Q9C005 99 aa18.95■□□□□ 0.62
CAPN1-226ENST00000533820 SPC25Q9HBM1 224 aa18.95■□□□□ 0.62
CAPN1-226ENST00000533820 SMPD4Q9NXE4 827 aa18.95■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms