RNA–Protein interactions for RNA: ENST00000533632.5

TRAPPC4-214, Transcript of trafficking protein particle complex 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC4, Length 1,759 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-214ENST00000533632 STX3Q13277 289 aa13.12□□□□□ -0.31
TRAPPC4-214ENST00000533632 PDAP1Q13442 181 aaKnown RBP13.12□□□□□ -0.31
TRAPPC4-214ENST00000533632 PCLAFQ15004 111 aa13.12□□□□□ -0.31
TRAPPC4-214ENST00000533632 C6orf89Q6UWU4 347 aa13.12□□□□□ -0.31
TRAPPC4-214ENST00000533632 YTHDF3Q7Z739 585 aaKnown RBP13.12□□□□□ -0.31
TRAPPC4-214ENST00000533632 CFAP206Q8IYR0 622 aa13.12□□□□□ -0.31
TRAPPC4-214ENST00000533632 PPP1R14CQ8TAE6 165 aa13.12□□□□□ -0.31
TRAPPC4-214ENST00000533632 HM13Q8TCT9 377 aa13.12□□□□□ -0.31
TRAPPC4-214ENST00000533632 EEF1AKMT1Q8WVE0 214 aa13.12□□□□□ -0.31
TRAPPC4-214ENST00000533632 INPP5DQ92835 1189 aa13.12□□□□□ -0.31
TRAPPC4-214ENST00000533632 UBXN10Q96LJ8 280 aa13.12□□□□□ -0.31
TRAPPC4-214ENST00000533632 MRPL57Q9BQC6 102 aaKnown RBP13.12□□□□□ -0.31
TRAPPC4-214ENST00000533632 MRPL46Q9H2W6 279 aaKnown RBP13.12□□□□□ -0.31
TRAPPC4-214ENST00000533632 GAREM1Q9H706 876 aa13.12□□□□□ -0.31
TRAPPC4-214ENST00000533632 ERVMER34-1Q9H9K5 563 aa13.12□□□□□ -0.31
TRAPPC4-214ENST00000533632 DNAAF2Q9NVR5 837 aaKnown RBP13.12□□□□□ -0.31
TRAPPC4-214ENST00000533632 APOBEC3BQ9UH17 382 aaKnown RBP13.12□□□□□ -0.31
TRAPPC4-214ENST00000533632 DNMT3AQ9Y6K1 912 aaPredicted RBP13.12□□□□□ -0.31
TRAPPC4-214ENST00000533632 PCNX2A6NKB5 2137 aa13.12□□□□□ -0.31
TRAPPC4-214ENST00000533632 CNOT1A5YKK6 2376 aaKnown RBP13.12□□□□□ -0.31
TRAPPC4-214ENST00000533632 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.12□□□□□ -0.31
TRAPPC4-214ENST00000533632 CCDC189A1A4V9 331 aa13.12□□□□□ -0.31
TRAPPC4-214ENST00000533632 C4orf47A7E2U8 309 aa13.12□□□□□ -0.31
TRAPPC4-214ENST00000533632 FOXD2O60548 495 aaPredicted RBP13.12□□□□□ -0.31
TRAPPC4-214ENST00000533632 SDC3O75056 442 aa13.12□□□□□ -0.31
TRAPPC4-214ENST00000533632 SNNO75324 88 aaPredicted RBP13.12□□□□□ -0.31
TRAPPC4-214ENST00000533632 SLCO2B1O94956 709 aa13.12□□□□□ -0.31
TRAPPC4-214ENST00000533632 EML2O95834 649 aa13.12□□□□□ -0.31
TRAPPC4-214ENST00000533632 TNFP01375 233 aa13.12□□□□□ -0.31
TRAPPC4-214ENST00000533632 SERPINE1P05121 402 aa13.12□□□□□ -0.31
TRAPPC4-214ENST00000533632 RBP1P09455 135 aa13.12□□□□□ -0.31
TRAPPC4-214ENST00000533632 LTA4HP09960 611 aaKnown RBP13.12□□□□□ -0.31
TRAPPC4-214ENST00000533632 SKIV2L2P42285 1042 aaKnown RBP13.12□□□□□ -0.31
TRAPPC4-214ENST00000533632 C1orf61Q13536 156 aa13.12□□□□□ -0.31
TRAPPC4-214ENST00000533632 ACAP2Q15057 778 aa13.12□□□□□ -0.31
TRAPPC4-214ENST00000533632 STPG1Q5TH74 334 aa13.12□□□□□ -0.31
TRAPPC4-214ENST00000533632 METRNLQ641Q3 311 aa13.12□□□□□ -0.31
TRAPPC4-214ENST00000533632 FOXR1Q6PIV2 292 aa13.12□□□□□ -0.31
TRAPPC4-214ENST00000533632 PIWIL4Q7Z3Z4 852 aaKnown RBP13.12□□□□□ -0.31
TRAPPC4-214ENST00000533632 SPDYE1Q8NFV5 336 aaPredicted RBP13.12□□□□□ -0.31
TRAPPC4-214ENST00000533632 GPBAR1Q8TDU6 330 aa13.12□□□□□ -0.31
TRAPPC4-214ENST00000533632 KCTD4Q8WVF5 259 aa13.12□□□□□ -0.31
TRAPPC4-214ENST00000533632 ELF4Q99607 663 aaPredicted RBP13.12□□□□□ -0.31
TRAPPC4-214ENST00000533632 MECRQ9BV79 373 aa13.12□□□□□ -0.31
TRAPPC4-214ENST00000533632 TRIM55Q9BYV6 548 aa13.12□□□□□ -0.31
TRAPPC4-214ENST00000533632 SYTL2Q9HCH5 934 aa13.12□□□□□ -0.31
TRAPPC4-214ENST00000533632 TMEM9BQ9NQ34 198 aa13.12□□□□□ -0.31
TRAPPC4-214ENST00000533632 IGSF5Q9NSI5 407 aa13.12□□□□□ -0.31
TRAPPC4-214ENST00000533632 ZNF358Q9NW07 568 aa13.12□□□□□ -0.31
TRAPPC4-214ENST00000533632 TRNAU1APQ9NX07 287 aaKnown RBP13.12□□□□□ -0.31
TRAPPC4-214ENST00000533632 WDR37Q9Y2I8 494 aa13.12□□□□□ -0.31
TRAPPC4-214ENST00000533632 A0A1B0GTQ1 180 aa13.11□□□□□ -0.31
TRAPPC4-214ENST00000533632 TRIM13O60858 407 aa13.11□□□□□ -0.31
TRAPPC4-214ENST00000533632 CCDC166P0CW27 439 aa13.11□□□□□ -0.31
TRAPPC4-214ENST00000533632 MYL2P10916 166 aa13.11□□□□□ -0.31
TRAPPC4-214ENST00000533632 RPL10P27635 214 aaKnown RBP13.11□□□□□ -0.31
TRAPPC4-214ENST00000533632 LIMK1P53667 647 aa13.11□□□□□ -0.31
TRAPPC4-214ENST00000533632 HNRNPH2P55795 449 aaKnown RBP13.11□□□□□ -0.31
TRAPPC4-214ENST00000533632 BST1Q10588 318 aa13.11□□□□□ -0.31
TRAPPC4-214ENST00000533632 PRRT3Q5FWE3 981 aa13.11□□□□□ -0.31
TRAPPC4-214ENST00000533632 PLEKHS1Q5SXH7 462 aa13.11□□□□□ -0.31
TRAPPC4-214ENST00000533632 LRRC8EQ6NSJ5 796 aa13.11□□□□□ -0.31
TRAPPC4-214ENST00000533632 CGB2Q6NT52 195 aa13.11□□□□□ -0.31
TRAPPC4-214ENST00000533632 SLC30A9Q6PML9 568 aa13.11□□□□□ -0.31
TRAPPC4-214ENST00000533632 IL27RAQ6UWB1 636 aa13.11□□□□□ -0.31
TRAPPC4-214ENST00000533632 ZYG11AQ6WRX3 759 aa13.11□□□□□ -0.31
TRAPPC4-214ENST00000533632 CYHR1Q6ZMK1 362 aa13.11□□□□□ -0.31
TRAPPC4-214ENST00000533632 KANSL1Q7Z3B3 1105 aa13.11□□□□□ -0.31
TRAPPC4-214ENST00000533632 SFTPA2Q8IWL1 248 aa13.11□□□□□ -0.31
TRAPPC4-214ENST00000533632 SKA1Q96BD8 255 aa13.11□□□□□ -0.31
TRAPPC4-214ENST00000533632 CCDC126Q96EE4 140 aa13.11□□□□□ -0.31
TRAPPC4-214ENST00000533632 LINGO1Q96FE5 620 aa13.11□□□□□ -0.31
TRAPPC4-214ENST00000533632 GPR78Q96P69 363 aa13.11□□□□□ -0.31
TRAPPC4-214ENST00000533632 OR52A5Q9H2C5 316 aa13.11□□□□□ -0.31
TRAPPC4-214ENST00000533632 OSGEPL1Q9H4B0 414 aa13.11□□□□□ -0.31
TRAPPC4-214ENST00000533632 UCKL1Q9NWZ5 548 aa13.11□□□□□ -0.31
TRAPPC4-214ENST00000533632 KLHL42Q9P2K6 505 aa13.11□□□□□ -0.31
TRAPPC4-214ENST00000533632 TBC1D29Q9UFV1 150 aa13.11□□□□□ -0.31
TRAPPC4-214ENST00000533632 TARM1B6A8C7 271 aa13.1□□□□□ -0.31
TRAPPC4-214ENST00000533632 F8W8V4 182 aa13.1□□□□□ -0.31
TRAPPC4-214ENST00000533632 G3V2L1 256 aa13.1□□□□□ -0.31
TRAPPC4-214ENST00000533632 TM4SF5O14894 197 aa13.1□□□□□ -0.31
TRAPPC4-214ENST00000533632 LIN7AO14910 233 aaPredicted RBP13.1□□□□□ -0.31
TRAPPC4-214ENST00000533632 SNUPNO95149 360 aaKnown RBP13.1□□□□□ -0.31
TRAPPC4-214ENST00000533632 GSTM1P09488 218 aa13.1□□□□□ -0.31
TRAPPC4-214ENST00000533632 FGF3P11487 239 aaPredicted RBP13.1□□□□□ -0.31
TRAPPC4-214ENST00000533632 ACTR1BP42025 376 aa13.1□□□□□ -0.31
TRAPPC4-214ENST00000533632 RXRGP48443 463 aa13.1□□□□□ -0.31
TRAPPC4-214ENST00000533632 ACTR1AP61163 376 aa13.1□□□□□ -0.31
TRAPPC4-214ENST00000533632 OCRLQ01968 901 aa13.1□□□□□ -0.31
TRAPPC4-214ENST00000533632 GSTM4Q03013 218 aa13.1□□□□□ -0.31
TRAPPC4-214ENST00000533632 LRP8Q14114 963 aa13.1□□□□□ -0.31
TRAPPC4-214ENST00000533632 CSHL1Q14406 222 aa13.1□□□□□ -0.31
TRAPPC4-214ENST00000533632 SYTL3Q4VX76 610 aa13.1□□□□□ -0.31
TRAPPC4-214ENST00000533632 UGT3A1Q6NUS8 523 aa13.1□□□□□ -0.31
TRAPPC4-214ENST00000533632 CRLF3Q8IUI8 442 aa13.1□□□□□ -0.31
TRAPPC4-214ENST00000533632 C10orf107Q8IVU9 208 aa13.1□□□□□ -0.31
TRAPPC4-214ENST00000533632 SLC22A15Q8IZD6 547 aa13.1□□□□□ -0.31
TRAPPC4-214ENST00000533632 FSTL5Q8N475 847 aaPredicted RBP13.1□□□□□ -0.31
TRAPPC4-214ENST00000533632 TMEM151AQ8N4L1 468 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms