RNA–Protein interactions for RNA: ENST00000533058.5

TRAPPC4-212, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2 BASIC

Gene TRAPPC4, Length 1,209 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-212ENST00000533058 CTAGE3PQ8IX95 158 aa12.64□□□□□ -0.39
TRAPPC4-212ENST00000533058 RCBTB1Q8NDN9 531 aa12.64□□□□□ -0.39
TRAPPC4-212ENST00000533058 NCSTNQ92542 709 aa12.64□□□□□ -0.39
TRAPPC4-212ENST00000533058 USP7Q93009 1102 aa12.64□□□□□ -0.39
TRAPPC4-212ENST00000533058 CXorf40BQ96DE9 158 aa12.64□□□□□ -0.39
TRAPPC4-212ENST00000533058 DDA1Q9BW61 102 aa12.64□□□□□ -0.39
TRAPPC4-212ENST00000533058 TBC1D10AQ9BXI6 508 aa12.64□□□□□ -0.39
TRAPPC4-212ENST00000533058 ASPSCR1Q9BZE9 553 aa12.64□□□□□ -0.39
TRAPPC4-212ENST00000533058 PLAC1Q9HBJ0 212 aa12.64□□□□□ -0.39
TRAPPC4-212ENST00000533058 LRRC4CQ9HCJ2 640 aa12.64□□□□□ -0.39
TRAPPC4-212ENST00000533058 RRAGDQ9NQL2 400 aaPredicted RBP12.64□□□□□ -0.39
TRAPPC4-212ENST00000533058 NINJ2Q9NZG7 142 aa12.64□□□□□ -0.39
TRAPPC4-212ENST00000533058 OGFRQ9NZT2 677 aa12.64□□□□□ -0.39
TRAPPC4-212ENST00000533058 TMEM9Q9P0T7 183 aa12.64□□□□□ -0.39
TRAPPC4-212ENST00000533058 TXNDC16Q9P2K2 825 aa12.64□□□□□ -0.39
TRAPPC4-212ENST00000533058 SLC17A6Q9P2U8 582 aa12.64□□□□□ -0.39
TRAPPC4-212ENST00000533058 ZNF106Q9H2Y7 1883 aaKnown RBP12.63□□□□□ -0.39
TRAPPC4-212ENST00000533058 PRAMEF33A0A0G2JMD5 474 aa12.63□□□□□ -0.39
TRAPPC4-212ENST00000533058 OR52A4PA6NMU1 304 aa12.63□□□□□ -0.39
TRAPPC4-212ENST00000533058 E5RI56 91 aa12.63□□□□□ -0.39
TRAPPC4-212ENST00000533058 KLK10O43240 276 aa12.63□□□□□ -0.39
TRAPPC4-212ENST00000533058 PRAMEF10O60809 474 aa12.63□□□□□ -0.39
TRAPPC4-212ENST00000533058 UBXN7O94888 489 aa12.63□□□□□ -0.39
TRAPPC4-212ENST00000533058 ACSL3O95573 720 aa12.63□□□□□ -0.39
TRAPPC4-212ENST00000533058 S1PR4O95977 384 aa12.63□□□□□ -0.39
TRAPPC4-212ENST00000533058 LIPCP11150 499 aa12.63□□□□□ -0.39
TRAPPC4-212ENST00000533058 MCM3P25205 808 aa12.63□□□□□ -0.39
TRAPPC4-212ENST00000533058 CSE1LP55060 971 aaKnown RBP12.63□□□□□ -0.39
TRAPPC4-212ENST00000533058 TMPRSS3P57727 454 aa12.63□□□□□ -0.39
TRAPPC4-212ENST00000533058 RAB15P59190 212 aa12.63□□□□□ -0.39
TRAPPC4-212ENST00000533058 GPX6P59796 221 aa12.63□□□□□ -0.39
TRAPPC4-212ENST00000533058 CBLBQ13191 982 aa12.63□□□□□ -0.39
TRAPPC4-212ENST00000533058 CLN3Q13286 438 aa12.63□□□□□ -0.39
TRAPPC4-212ENST00000533058 BOP1Q14137 746 aaKnown RBP12.63□□□□□ -0.39
TRAPPC4-212ENST00000533058 GPR18Q14330 331 aa12.63□□□□□ -0.39
TRAPPC4-212ENST00000533058 FRG1Q14331 258 aaKnown RBP12.63□□□□□ -0.39
TRAPPC4-212ENST00000533058 BRD3Q15059 726 aa12.63□□□□□ -0.39
TRAPPC4-212ENST00000533058 RPE65Q16518 533 aa12.63□□□□□ -0.39
TRAPPC4-212ENST00000533058 ZNF658BQ4V348 819 aaPredicted RBP12.63□□□□□ -0.39
TRAPPC4-212ENST00000533058 ZNF789Q5FWF6 425 aa12.63□□□□□ -0.39
TRAPPC4-212ENST00000533058 TEDDM1Q5T9Z0 273 aa12.63□□□□□ -0.39
TRAPPC4-212ENST00000533058 XKR5Q6UX68 686 aa12.63□□□□□ -0.39
TRAPPC4-212ENST00000533058 GPR155Q7Z3F1 870 aa12.63□□□□□ -0.39
TRAPPC4-212ENST00000533058 CFAP206Q8IYR0 622 aa12.63□□□□□ -0.39
TRAPPC4-212ENST00000533058 BMPERQ8N8U9 685 aa12.63□□□□□ -0.39
TRAPPC4-212ENST00000533058 C2CD4AQ8NCU7 369 aaPredicted RBP12.63□□□□□ -0.39
TRAPPC4-212ENST00000533058 LSM14AQ8ND56 463 aaKnown RBP12.63□□□□□ -0.39
TRAPPC4-212ENST00000533058 HM13Q8TCT9 377 aa12.63□□□□□ -0.39
TRAPPC4-212ENST00000533058 FBF1Q8TES7 1133 aa12.63□□□□□ -0.39
TRAPPC4-212ENST00000533058 ELMO1Q92556 727 aa12.63□□□□□ -0.39
TRAPPC4-212ENST00000533058 LPGAT1Q92604 370 aa12.63□□□□□ -0.39
TRAPPC4-212ENST00000533058 NAF1Q96HR8 494 aaKnown RBP12.63□□□□□ -0.39
TRAPPC4-212ENST00000533058 TEFMQ96QE5 360 aaKnown RBP12.63□□□□□ -0.39
TRAPPC4-212ENST00000533058 CDC42EP4Q9H3Q1 356 aaKnown RBP12.63□□□□□ -0.39
TRAPPC4-212ENST00000533058 FBXO8Q9NRD0 319 aa12.63□□□□□ -0.39
TRAPPC4-212ENST00000533058 NSMCE4AQ9NXX6 385 aa12.63□□□□□ -0.39
TRAPPC4-212ENST00000533058 TEX51A0A1B0GUA7 166 aa12.62□□□□□ -0.39
TRAPPC4-212ENST00000533058 TCRBV9S1A1TA0A576 114 aa12.62□□□□□ -0.39
TRAPPC4-212ENST00000533058 IQCF5A8MTL0 148 aa12.62□□□□□ -0.39
TRAPPC4-212ENST00000533058 H3BMM5 538 aa12.62□□□□□ -0.39
TRAPPC4-212ENST00000533058 PIAS1O75925 651 aa12.62□□□□□ -0.39
TRAPPC4-212ENST00000533058 HAUS5O94927 633 aa12.62□□□□□ -0.39
TRAPPC4-212ENST00000533058 ESR1P03372 595 aa12.62□□□□□ -0.39
TRAPPC4-212ENST00000533058 FAM153BP0C7A2 387 aa12.62□□□□□ -0.39
TRAPPC4-212ENST00000533058 PKMP14618 531 aaKnown RBP12.62□□□□□ -0.39
TRAPPC4-212ENST00000533058 AMD1P17707 334 aa12.62□□□□□ -0.39
TRAPPC4-212ENST00000533058 CHRM3P20309 590 aa12.62□□□□□ -0.39
TRAPPC4-212ENST00000533058 RPS3P23396 243 aaKnown RBP eCLIP12.62□□□□□ -0.392e-8■■■■■ 45.7
TRAPPC4-212ENST00000533058 MPSTP25325 297 aa12.62□□□□□ -0.39
TRAPPC4-212ENST00000533058 TNFRSF8P28908 595 aa12.62□□□□□ -0.39
TRAPPC4-212ENST00000533058 CAPZBP47756 277 aa12.62□□□□□ -0.39
TRAPPC4-212ENST00000533058 CD151P48509 253 aa12.62□□□□□ -0.39
TRAPPC4-212ENST00000533058 MAPK10P53779 464 aa12.62□□□□□ -0.39
TRAPPC4-212ENST00000533058 PMS2P54278 862 aa12.62□□□□□ -0.39
TRAPPC4-212ENST00000533058 MC2RQ01718 297 aa12.62□□□□□ -0.39
TRAPPC4-212ENST00000533058 TMED2Q15363 201 aa12.62□□□□□ -0.39
TRAPPC4-212ENST00000533058 FAM153CQ494X1 144 aa12.62□□□□□ -0.39
TRAPPC4-212ENST00000533058 CAPRIN2Q6IMN6 1127 aaKnown RBP12.62□□□□□ -0.39
TRAPPC4-212ENST00000533058 KLHL35Q6PF15 583 aa12.62□□□□□ -0.39
TRAPPC4-212ENST00000533058 CNSTQ6PJW8 725 aa12.62□□□□□ -0.39
TRAPPC4-212ENST00000533058 KIAA0408Q6ZU52 694 aa12.62□□□□□ -0.39
TRAPPC4-212ENST00000533058 KRT222Q8N1A0 295 aa12.62□□□□□ -0.39
TRAPPC4-212ENST00000533058 GPATCH11Q8N954 259 aa12.62□□□□□ -0.39
TRAPPC4-212ENST00000533058 EIF1ADQ8N9N8 165 aaKnown RBP12.62□□□□□ -0.39
TRAPPC4-212ENST00000533058 UHMK1Q8TAS1 419 aaKnown RBP12.62□□□□□ -0.39
TRAPPC4-212ENST00000533058 FAM136AQ96C01 138 aa12.62□□□□□ -0.39
TRAPPC4-212ENST00000533058 MRRFQ96E11 262 aaKnown RBP12.62□□□□□ -0.39
TRAPPC4-212ENST00000533058 CRELD1Q96HD1 420 aa12.62□□□□□ -0.39
TRAPPC4-212ENST00000533058 PANX3Q96QZ0 392 aa12.62□□□□□ -0.39
TRAPPC4-212ENST00000533058 INSM2Q96T92 566 aaPredicted RBP12.62□□□□□ -0.39
TRAPPC4-212ENST00000533058 ZPBPQ9BS86 351 aa12.62□□□□□ -0.39
TRAPPC4-212ENST00000533058 MOCS1Q9NZB8 636 aa12.62□□□□□ -0.39
TRAPPC4-212ENST00000533058 FOXJ2Q9P0K8 574 aa12.62□□□□□ -0.39
TRAPPC4-212ENST00000533058 SEMA5BQ9P283 1151 aa12.62□□□□□ -0.39
TRAPPC4-212ENST00000533058 PSMD13Q9UNM6 376 aa12.62□□□□□ -0.39
TRAPPC4-212ENST00000533058 K7ENP7 123 aa12.61□□□□□ -0.39
TRAPPC4-212ENST00000533058 CAPN5O15484 640 aaPredicted RBP12.61□□□□□ -0.39
TRAPPC4-212ENST00000533058 APOA4P06727 396 aa12.61□□□□□ -0.39
TRAPPC4-212ENST00000533058 SLC35G4P0C7Q5 338 aa12.61□□□□□ -0.39
TRAPPC4-212ENST00000533058 MYBL2P10244 700 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms