RNA–Protein interactions for RNA: ENST00000533018.1

PCF11-206, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 3

Gene PCF11, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-206ENST00000533018 ENDOVQ8N8Q3 282 aaKnown RBP17.28■□□□□ 0.36
PCF11-206ENST00000533018 DNAAF3Q8N9W5 541 aa17.28■□□□□ 0.36
PCF11-206ENST00000533018 OR1L3Q8NH93 324 aa17.28■□□□□ 0.36
PCF11-206ENST00000533018 ING2Q9H160 280 aa17.28■□□□□ 0.36
PCF11-206ENST00000533018 ACTR5Q9H9F9 607 aaPredicted RBP17.28■□□□□ 0.36
PCF11-206ENST00000533018 AP2A2O94973 939 aa17.27■□□□□ 0.36
PCF11-206ENST00000533018 AP2A1O95782 977 aa17.27■□□□□ 0.36
PCF11-206ENST00000533018 GAS8O95995 478 aa17.27■□□□□ 0.36
PCF11-206ENST00000533018 FTH1P02794 183 aa17.27■□□□□ 0.36
PCF11-206ENST00000533018 GSTM1P09488 218 aa17.27■□□□□ 0.36
PCF11-206ENST00000533018 ATXN8OSP0DMR3 200 aa17.27■□□□□ 0.36
PCF11-206ENST00000533018 PVRP15151 417 aa17.27■□□□□ 0.36
PCF11-206ENST00000533018 MSNP26038 577 aaKnown RBP17.27■□□□□ 0.36
PCF11-206ENST00000533018 NSG1P42857 185 aa17.27■□□□□ 0.36
PCF11-206ENST00000533018 GSTM4Q03013 218 aa17.27■□□□□ 0.36
PCF11-206ENST00000533018 SYTL3Q4VX76 610 aa17.27■□□□□ 0.36
PCF11-206ENST00000533018 LCN10Q6JVE6 187 aa17.27■□□□□ 0.36
PCF11-206ENST00000533018 LINC00523Q86TU6 105 aa17.27■□□□□ 0.36
PCF11-206ENST00000533018 ATCAYQ86WG3 371 aa17.27■□□□□ 0.36
PCF11-206ENST00000533018 KLHDC8BQ8IXV7 354 aa17.27■□□□□ 0.36
PCF11-206ENST00000533018 ELMO1Q92556 727 aa17.27■□□□□ 0.36
PCF11-206ENST00000533018 LRFN5Q96NI6 719 aa17.27■□□□□ 0.36
PCF11-206ENST00000533018 TRAPPC9Q96Q05 1148 aa17.27■□□□□ 0.36
PCF11-206ENST00000533018 DESI2Q9BSY9 194 aa17.27■□□□□ 0.36
PCF11-206ENST00000533018 SLC25A23Q9BV35 468 aa17.27■□□□□ 0.36
PCF11-206ENST00000533018 SYTL2Q9HCH5 934 aa17.27■□□□□ 0.36
PCF11-206ENST00000533018 ACTR10Q9NZ32 417 aa17.27■□□□□ 0.36
PCF11-206ENST00000533018 ASF1AQ9Y294 204 aa17.27■□□□□ 0.36
PCF11-206ENST00000533018 TDRKHQ9Y2W6 561 aaKnown RBP17.27■□□□□ 0.36
PCF11-206ENST00000533018 TCRBV7S2A1N4TA0A589 114 aa17.26■□□□□ 0.35
PCF11-206ENST00000533018 OR51F1A6NGY5 319 aa17.26■□□□□ 0.35
PCF11-206ENST00000533018 CYSRT1A8MQ03 144 aa17.26■□□□□ 0.35
PCF11-206ENST00000533018 E7EQ34 232 aa17.26■□□□□ 0.35
PCF11-206ENST00000533018 LIN7AO14910 233 aaPredicted RBP17.26■□□□□ 0.35
PCF11-206ENST00000533018 PDGFAP04085 211 aa17.26■□□□□ 0.35
PCF11-206ENST00000533018 PGDP52209 483 aa17.26■□□□□ 0.35
PCF11-206ENST00000533018 ITGA1P56199 1179 aa17.26■□□□□ 0.35
PCF11-206ENST00000533018 KLF1Q13351 362 aaPredicted RBP17.26■□□□□ 0.35
PCF11-206ENST00000533018 BOP1Q14137 746 aaKnown RBP17.26■□□□□ 0.35
PCF11-206ENST00000533018 PTCHD3Q3KNS1 767 aa17.26■□□□□ 0.35
PCF11-206ENST00000533018 NAPRTQ6XQN6 538 aa17.26■□□□□ 0.35
PCF11-206ENST00000533018 ZNF517Q6ZMY9 492 aaPredicted RBP17.26■□□□□ 0.35
PCF11-206ENST00000533018 SYTL1Q8IYJ3 562 aa17.26■□□□□ 0.35
PCF11-206ENST00000533018 OR52K1Q8NGK4 314 aa17.26■□□□□ 0.35
PCF11-206ENST00000533018 OR5AR1Q8NGP9 310 aa17.26■□□□□ 0.35
PCF11-206ENST00000533018 TBRG4Q969Z0 631 aaKnown RBP eCLIP17.26■□□□□ 0.35
PCF11-206ENST00000533018 NLNQ9BYT8 704 aa17.26■□□□□ 0.35
PCF11-206ENST00000533018 PITPNM3Q9BZ71 974 aa17.26■□□□□ 0.35
PCF11-206ENST00000533018 PRSS21Q9Y6M0 314 aa17.26■□□□□ 0.35
PCF11-206ENST00000533018 A0A0U1RQJ8 604 aa17.25■□□□□ 0.35
PCF11-206ENST00000533018 MROH6A6NGR9 719 aa17.25■□□□□ 0.35
PCF11-206ENST00000533018 TTLL8A6PVC2 850 aa17.25■□□□□ 0.35
PCF11-206ENST00000533018 E7EVH7 732 aa17.25■□□□□ 0.35
PCF11-206ENST00000533018 QSOX1O00391 747 aa17.25■□□□□ 0.35
PCF11-206ENST00000533018 IFNB1P01574 187 aa17.25■□□□□ 0.35
PCF11-206ENST00000533018 RAB40ALP0C0E4 278 aa17.25■□□□□ 0.35
PCF11-206ENST00000533018 PTGIRP43119 386 aa17.25■□□□□ 0.35
PCF11-206ENST00000533018 ZNF658BQ4V348 819 aaPredicted RBP17.25■□□□□ 0.35
PCF11-206ENST00000533018 FAM69BQ5VUD6 431 aa17.25■□□□□ 0.35
PCF11-206ENST00000533018 SPESP1Q6UW49 350 aa17.25■□□□□ 0.35
PCF11-206ENST00000533018 PPP1R21Q6ZMI0 780 aa17.25■□□□□ 0.35
PCF11-206ENST00000533018 TRIM73Q86UV7 250 aa17.25■□□□□ 0.35
PCF11-206ENST00000533018 GPR135Q8IZ08 494 aa17.25■□□□□ 0.35
PCF11-206ENST00000533018 ADGRF3Q8IZF5 1079 aa17.25■□□□□ 0.35
PCF11-206ENST00000533018 SLC35B2Q8TB61 432 aa17.25■□□□□ 0.35
PCF11-206ENST00000533018 ATG4AQ8WYN0 398 aa17.25■□□□□ 0.35
PCF11-206ENST00000533018 TTC1Q99614 292 aa17.25■□□□□ 0.35
PCF11-206ENST00000533018 PCMTD2Q9NV79 361 aa17.25■□□□□ 0.35
PCF11-206ENST00000533018 TCFL5Q9UL49 500 aa17.25■□□□□ 0.35
PCF11-206ENST00000533018 CCDC88CQ9P219 2028 aa17.25■□□□□ 0.35
PCF11-206ENST00000533018 CCDC162PA2VCL2 907 aa17.24■□□□□ 0.35
PCF11-206ENST00000533018 ZNF749O43361 778 aa17.24■□□□□ 0.35
PCF11-206ENST00000533018 TMEM63AO94886 807 aa17.24■□□□□ 0.35
PCF11-206ENST00000533018 OR56A5P0C7T3 313 aa17.24■□□□□ 0.35
PCF11-206ENST00000533018 AGXTP21549 392 aa17.24■□□□□ 0.35
PCF11-206ENST00000533018 STIP1P31948 543 aaKnown RBP17.24■□□□□ 0.35
PCF11-206ENST00000533018 SHMT2P34897 504 aa17.24■□□□□ 0.35
PCF11-206ENST00000533018 RORAP35398 523 aa17.24■□□□□ 0.35
PCF11-206ENST00000533018 CSE1LP55060 971 aaKnown RBP17.24■□□□□ 0.35
PCF11-206ENST00000533018 CDH17Q12864 832 aa17.24■□□□□ 0.35
PCF11-206ENST00000533018 LAMB3Q13751 1172 aa17.24■□□□□ 0.35
PCF11-206ENST00000533018 ITIH4Q14624 930 aa17.24■□□□□ 0.35
PCF11-206ENST00000533018 UNC5AQ6ZN44 842 aa17.24■□□□□ 0.35
PCF11-206ENST00000533018 CDHR3Q6ZTQ4 885 aa17.24■□□□□ 0.35
PCF11-206ENST00000533018 EFCAB3Q8N7B9 438 aa17.24■□□□□ 0.35
PCF11-206ENST00000533018 MIB2Q96AX9 1013 aa17.24■□□□□ 0.35
PCF11-206ENST00000533018 HES6Q96HZ4 224 aa17.24■□□□□ 0.35
PCF11-206ENST00000533018 IRAK4Q9NWZ3 460 aa17.24■□□□□ 0.35
PCF11-206ENST00000533018 ANKMY1Q9P2S6 941 aa17.24■□□□□ 0.35
PCF11-206ENST00000533018 IMPACTQ9P2X3 320 aa17.24■□□□□ 0.35
PCF11-206ENST00000533018 POLG2Q9UHN1 485 aa17.24■□□□□ 0.35
PCF11-206ENST00000533018 G3BP2Q9UN86 482 aaKnown RBP17.24■□□□□ 0.35
PCF11-206ENST00000533018 ICKQ9UPZ9 632 aa17.24■□□□□ 0.35
PCF11-206ENST00000533018 ZNF148Q9UQR1 794 aa17.24■□□□□ 0.35
PCF11-206ENST00000533018 UTP20O75691 2785 aaKnown RBP17.23■□□□□ 0.35
PCF11-206ENST00000533018 HEATR9A2RTY3 570 aa17.23■□□□□ 0.35
PCF11-206ENST00000533018 A6NL46 340 aa17.23■□□□□ 0.35
PCF11-206ENST00000533018 C9J4A7 227 aa17.23■□□□□ 0.35
PCF11-206ENST00000533018 ZNF185O15231 689 aa17.23■□□□□ 0.35
PCF11-206ENST00000533018 VPS4BO75351 444 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms