RNA–Protein interactions for RNA: ENST00000532600.1

SSH3-209, Transcript of slingshot protein phosphatase 3, humanhuman

TSL 4

Gene SSH3, Length 555 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-209ENST00000532600 HDAC10Q969S8 669 aa18.39■□□□□ 0.53
SSH3-209ENST00000532600 FCRL4Q96PJ5 515 aa18.39■□□□□ 0.53
SSH3-209ENST00000532600 RANBP9Q96S59 729 aa18.39■□□□□ 0.53
SSH3-209ENST00000532600 SRMSQ9H3Y6 488 aa18.39■□□□□ 0.53
SSH3-209ENST00000532600 TFB2MQ9H5Q4 396 aaKnown RBP18.39■□□□□ 0.53
SSH3-209ENST00000532600 RAB6BQ9NRW1 208 aa18.39■□□□□ 0.53
SSH3-209ENST00000532600 PAK5Q9P286 719 aa18.39■□□□□ 0.53
SSH3-209ENST00000532600 RNF14Q9UBS8 474 aa18.39■□□□□ 0.53
SSH3-209ENST00000532600 PADI1Q9ULC6 663 aa18.39■□□□□ 0.53
SSH3-209ENST00000532600 PCDHGA6Q9Y5G7 932 aa18.39■□□□□ 0.53
SSH3-209ENST00000532600 SLC5A10A0PJK1 596 aa18.38■□□□□ 0.53
SSH3-209ENST00000532600 BHMG1C9JSJ3 638 aaPredicted RBP18.38■□□□□ 0.53
SSH3-209ENST00000532600 ST6GAL1P15907 406 aa18.38■□□□□ 0.53
SSH3-209ENST00000532600 PRDX3P30048 256 aaKnown RBP18.38■□□□□ 0.53
SSH3-209ENST00000532600 NSG1P42857 185 aa18.38■□□□□ 0.53
SSH3-209ENST00000532600 TUBB4BP68371 445 aa18.38■□□□□ 0.53
SSH3-209ENST00000532600 ABRQ12979 859 aa18.38■□□□□ 0.53
SSH3-209ENST00000532600 PRKG2Q13237 762 aa18.38■□□□□ 0.53
SSH3-209ENST00000532600 DNASE1L3Q13609 305 aa18.38■□□□□ 0.53
SSH3-209ENST00000532600 TUBB2AQ13885 445 aa18.38■□□□□ 0.53
SSH3-209ENST00000532600 KRT33BQ14525 404 aa18.38■□□□□ 0.53
SSH3-209ENST00000532600 ZNF789Q5FWF6 425 aa18.38■□□□□ 0.53
SSH3-209ENST00000532600 ARMC6Q6NXE6 501 aa18.38■□□□□ 0.53
SSH3-209ENST00000532600 KLHL7Q8IXQ5 586 aa18.38■□□□□ 0.53
SSH3-209ENST00000532600 CARFQ8N187 725 aa18.38■□□□□ 0.53
SSH3-209ENST00000532600 OR5AR1Q8NGP9 310 aa18.38■□□□□ 0.53
SSH3-209ENST00000532600 TFGQ92734 400 aaPredicted RBP18.38■□□□□ 0.53
SSH3-209ENST00000532600 HGH1Q9BTY7 390 aa18.38■□□□□ 0.53
SSH3-209ENST00000532600 TUBB2BQ9BVA1 445 aa18.38■□□□□ 0.53
SSH3-209ENST00000532600 PITPNM3Q9BZ71 974 aa18.38■□□□□ 0.53
SSH3-209ENST00000532600 TRIM4Q9C037 500 aa18.38■□□□□ 0.53
SSH3-209ENST00000532600 FAM117AQ9C073 453 aa18.38■□□□□ 0.53
SSH3-209ENST00000532600 MVB12BQ9H7P6 319 aa18.38■□□□□ 0.53
SSH3-209ENST00000532600 TUBD1Q9UJT1 453 aa18.38■□□□□ 0.53
SSH3-209ENST00000532600 RIMKLBQ9ULI2 386 aa18.38■□□□□ 0.53
SSH3-209ENST00000532600 ICKQ9UPZ9 632 aa18.38■□□□□ 0.53
SSH3-209ENST00000532600 UBR5O95071 2799 aaPredicted RBP18.38■□□□□ 0.53
SSH3-209ENST00000532600 SPTBP11277 2137 aa18.38■□□□□ 0.53
SSH3-209ENST00000532600 FLNBO75369 2602 aaKnown RBP18.37■□□□□ 0.53
SSH3-209ENST00000532600 HEATR9A2RTY3 570 aa18.37■□□□□ 0.53
SSH3-209ENST00000532600 IFRD1O00458 451 aaPredicted RBP18.37■□□□□ 0.53
SSH3-209ENST00000532600 KATNA1O75449 491 aa18.37■□□□□ 0.53
SSH3-209ENST00000532600 URI1O94763 535 aaPredicted RBP18.37■□□□□ 0.53
SSH3-209ENST00000532600 KRT14P02533 472 aa18.37■□□□□ 0.53
SSH3-209ENST00000532600 PVRP15151 417 aa18.37■□□□□ 0.53
SSH3-209ENST00000532600 PAFAH1B1P43034 410 aa18.37■□□□□ 0.53
SSH3-209ENST00000532600 ARL4DP49703 201 aa18.37■□□□□ 0.53
SSH3-209ENST00000532600 VPS41P49754 854 aa18.37■□□□□ 0.53
SSH3-209ENST00000532600 MC1RQ01726 317 aa18.37■□□□□ 0.53
SSH3-209ENST00000532600 GPS2Q13227 327 aa18.37■□□□□ 0.53
SSH3-209ENST00000532600 ERV3-1Q14264 604 aa18.37■□□□□ 0.53
SSH3-209ENST00000532600 BRD3Q15059 726 aa18.37■□□□□ 0.53
SSH3-209ENST00000532600 LCN10Q6JVE6 187 aa18.37■□□□□ 0.53
SSH3-209ENST00000532600 PPP1R21Q6ZMI0 780 aa18.37■□□□□ 0.53
SSH3-209ENST00000532600 BPHLQ86WA6 291 aaPredicted RBP18.37■□□□□ 0.53
SSH3-209ENST00000532600 SPATA4Q8NEY3 305 aa18.37■□□□□ 0.53
SSH3-209ENST00000532600 LKAAEAR1Q8TD35 194 aa18.37■□□□□ 0.53
SSH3-209ENST00000532600 TWSG1Q9GZX9 223 aa18.37■□□□□ 0.53
SSH3-209ENST00000532600 VPS37BQ9H9H4 285 aa18.37■□□□□ 0.53
SSH3-209ENST00000532600 C1GALT1Q9NS00 363 aa18.37■□□□□ 0.53
SSH3-209ENST00000532600 PCYOX1Q9UHG3 505 aa18.37■□□□□ 0.53
SSH3-209ENST00000532600 CDC23Q9UJX2 597 aa18.37■□□□□ 0.53
SSH3-209ENST00000532600 TCAF1Q9Y4C2 921 aa18.37■□□□□ 0.53
SSH3-209ENST00000532600 KCNMB2Q9Y691 235 aa18.37■□□□□ 0.53
SSH3-209ENST00000532600 TCRBV7S3A2A0A539 114 aa18.36■□□□□ 0.53
SSH3-209ENST00000532600 GSAPA4D1B5 854 aa18.36■□□□□ 0.53
SSH3-209ENST00000532600 LIN7AO14910 233 aaPredicted RBP18.36■□□□□ 0.53
SSH3-209ENST00000532600 SCRG1O75711 98 aa18.36■□□□□ 0.53
SSH3-209ENST00000532600 MT-ND3P03897 115 aa18.36■□□□□ 0.53
SSH3-209ENST00000532600 GSTM1P09488 218 aa18.36■□□□□ 0.53
SSH3-209ENST00000532600 CCNYL3P0C7X3 344 aa18.36■□□□□ 0.53
SSH3-209ENST00000532600 ADRA1DP25100 572 aa18.36■□□□□ 0.53
SSH3-209ENST00000532600 RPS18P62269 152 aaKnown RBP18.36■□□□□ 0.53
SSH3-209ENST00000532600 MRPS25P82663 173 aaKnown RBP18.36■□□□□ 0.53
SSH3-209ENST00000532600 GSTM4Q03013 218 aa18.36■□□□□ 0.53
SSH3-209ENST00000532600 C2orf54Q08AI8 447 aa18.36■□□□□ 0.53
SSH3-209ENST00000532600 CYB5D1Q6P9G0 228 aa18.36■□□□□ 0.53
SSH3-209ENST00000532600 AFTPHQ6ULP2 937 aa18.36■□□□□ 0.53
SSH3-209ENST00000532600 ZNF517Q6ZMY9 492 aaPredicted RBP18.36■□□□□ 0.53
SSH3-209ENST00000532600 ZNF572Q7Z3I7 529 aaPredicted RBP18.36■□□□□ 0.53
SSH3-209ENST00000532600 AMIGO1Q86WK6 493 aa18.36■□□□□ 0.53
SSH3-209ENST00000532600 PTRH1Q86Y79 214 aaKnown RBP18.36■□□□□ 0.53
SSH3-209ENST00000532600 OR1L3Q8NH93 324 aa18.36■□□□□ 0.53
SSH3-209ENST00000532600 FLVCR1-AS1Q8TAF5 88 aa18.36■□□□□ 0.53
SSH3-209ENST00000532600 APOBEC4Q8WW27 367 aaKnown RBP18.36■□□□□ 0.53
SSH3-209ENST00000532600 ELMO1Q92556 727 aa18.36■□□□□ 0.53
SSH3-209ENST00000532600 SLCO2A1Q92959 643 aa18.36■□□□□ 0.53
SSH3-209ENST00000532600 ABHD17AQ96GS6 310 aa18.36■□□□□ 0.53
SSH3-209ENST00000532600 TRAPPC9Q96Q05 1148 aa18.36■□□□□ 0.53
SSH3-209ENST00000532600 KLHL25Q9H0H3 589 aa18.36■□□□□ 0.53
SSH3-209ENST00000532600 SOHLH2Q9NX45 425 aa18.36■□□□□ 0.53
SSH3-209ENST00000532600 MARCH4Q9P2E8 410 aaPredicted RBP18.36■□□□□ 0.53
SSH3-209ENST00000532600 HEMK1Q9Y5R4 338 aaPredicted RBP18.36■□□□□ 0.53
SSH3-209ENST00000532600 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP18.35■□□□□ 0.53
SSH3-209ENST00000532600 K7EM74 188 aa18.35■□□□□ 0.53
SSH3-209ENST00000532600 KIF2AO00139 706 aaPredicted RBP18.35■□□□□ 0.53
SSH3-209ENST00000532600 MATN2O00339 956 aa18.35■□□□□ 0.53
SSH3-209ENST00000532600 CREG1O75629 220 aa18.35■□□□□ 0.53
SSH3-209ENST00000532600 TUBB4AP04350 444 aa18.35■□□□□ 0.53
SSH3-209ENST00000532600 APRTP07741 180 aa18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms