RNA–Protein interactions for RNA: ENST00000531118.5

CD44-232, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 877 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-232ENST00000531118 TRAM1L1Q8N609 369 aa7.94□□□□□ -1.14
CD44-232ENST00000531118 NSMCE1Q8WV22 266 aa7.94□□□□□ -1.14
CD44-232ENST00000531118 CPLX3Q8WVH0 158 aa7.94□□□□□ -1.14
CD44-232ENST00000531118 NINJ1Q92982 152 aa7.94□□□□□ -1.14
CD44-232ENST00000531118 PTERQ96BW5 349 aa7.94□□□□□ -1.14
CD44-232ENST00000531118 MAGED4Q96JG8 741 aa7.94□□□□□ -1.14
CD44-232ENST00000531118 NAA15Q9BXJ9 866 aaKnown RBP7.94□□□□□ -1.14
CD44-232ENST00000531118 POLR1EQ9GZS1 481 aaKnown RBP7.94□□□□□ -1.14
CD44-232ENST00000531118 C1GALT1Q9NS00 363 aa7.94□□□□□ -1.14
CD44-232ENST00000531118 ADAM22Q9P0K1 906 aa7.94□□□□□ -1.14
CD44-232ENST00000531118 EGFL7Q9UHF1 273 aa7.94□□□□□ -1.14
CD44-232ENST00000531118 SLC24A2Q9UI40 661 aa7.94□□□□□ -1.14
CD44-232ENST00000531118 CDC23Q9UJX2 597 aa7.94□□□□□ -1.14
CD44-232ENST00000531118 PSMD13Q9UNM6 376 aa7.94□□□□□ -1.14
CD44-232ENST00000531118 HS3ST3B1Q9Y662 390 aa7.94□□□□□ -1.14
CD44-232ENST00000531118 CFAP20Q9Y6A4 193 aaKnown RBP7.94□□□□□ -1.14
CD44-232ENST00000531118 ANK2Q01484 3957 aa7.94□□□□□ -1.14
CD44-232ENST00000531118 GSAPA4D1B5 854 aa7.93□□□□□ -1.14
CD44-232ENST00000531118 SIGLEC16A6NMB1 481 aa7.93□□□□□ -1.14
CD44-232ENST00000531118 CDK14O94921 469 aa7.93□□□□□ -1.14
CD44-232ENST00000531118 FGFR1OPO95684 399 aaKnown RBP7.93□□□□□ -1.14
CD44-232ENST00000531118 CRYABP02511 175 aaKnown RBP7.93□□□□□ -1.14
CD44-232ENST00000531118 SLC4A1P02730 911 aa7.93□□□□□ -1.14
CD44-232ENST00000531118 CD63P08962 238 aa7.93□□□□□ -1.14
CD44-232ENST00000531118 UNGP13051 313 aaPredicted RBP7.93□□□□□ -1.14
CD44-232ENST00000531118 DESP17661 470 aa7.93□□□□□ -1.14
CD44-232ENST00000531118 POLR2CP19387 275 aaPredicted RBP7.93□□□□□ -1.14
CD44-232ENST00000531118 CA4P22748 312 aa7.93□□□□□ -1.14
CD44-232ENST00000531118 MTIF2P46199 727 aaKnown RBP7.93□□□□□ -1.14
CD44-232ENST00000531118 TNFSF10P50591 281 aa7.93□□□□□ -1.14
CD44-232ENST00000531118 CDH6P55285 790 aa7.93□□□□□ -1.14
CD44-232ENST00000531118 RPL26P61254 145 aaKnown RBP7.93□□□□□ -1.14
CD44-232ENST00000531118 DCDP81605 110 aaKnown RBP7.93□□□□□ -1.14
CD44-232ENST00000531118 PRKAA1Q13131 559 aa7.93□□□□□ -1.14
CD44-232ENST00000531118 XRCC4Q13426 336 aa7.93□□□□□ -1.14
CD44-232ENST00000531118 GTF2H3Q13889 308 aa7.93□□□□□ -1.14
CD44-232ENST00000531118 SKOR2Q2VWA4 1001 aaPredicted RBP7.93□□□□□ -1.14
CD44-232ENST00000531118 DEFB110Q30KQ9 67 aa7.93□□□□□ -1.14
CD44-232ENST00000531118 ANKRD20A8PQ5CZ79 823 aa7.93□□□□□ -1.14
CD44-232ENST00000531118 MARC1Q5VT66 337 aa7.93□□□□□ -1.14
CD44-232ENST00000531118 CDHR3Q6ZTQ4 885 aa7.93□□□□□ -1.14
CD44-232ENST00000531118 CYP4V2Q6ZWL3 525 aaPredicted RBP7.93□□□□□ -1.14
CD44-232ENST00000531118 Q71RC1 249 aaPredicted RBP7.93□□□□□ -1.14
CD44-232ENST00000531118 MON1BQ7L1V2 547 aa7.93□□□□□ -1.14
CD44-232ENST00000531118 BIVMQ86UB2 503 aa7.93□□□□□ -1.14
CD44-232ENST00000531118 PHF13Q86YI8 300 aaPredicted RBP7.93□□□□□ -1.14
CD44-232ENST00000531118 TREML1Q86YW5 311 aa7.93□□□□□ -1.14
CD44-232ENST00000531118 CREBRFQ8IUR6 639 aa7.93□□□□□ -1.14
CD44-232ENST00000531118 GPR135Q8IZ08 494 aa7.93□□□□□ -1.14
CD44-232ENST00000531118 GPR26Q8NDV2 337 aa7.93□□□□□ -1.14
CD44-232ENST00000531118 CCHCR1Q8TD31 782 aa7.93□□□□□ -1.14
CD44-232ENST00000531118 TEKT4Q8WW24 435 aa7.93□□□□□ -1.14
CD44-232ENST00000531118 EID2BQ96D98 161 aa7.93□□□□□ -1.14
CD44-232ENST00000531118 THOC3Q96J01 351 aaKnown RBP7.93□□□□□ -1.14
CD44-232ENST00000531118 AP1M1Q9BXS5 423 aa7.93□□□□□ -1.14
CD44-232ENST00000531118 PITPNM3Q9BZ71 974 aa7.93□□□□□ -1.14
CD44-232ENST00000531118 KIR3DX1Q9H7L2 352 aa7.93□□□□□ -1.14
CD44-232ENST00000531118 CCM2LQ9NUG4 571 aaPredicted RBP7.93□□□□□ -1.14
CD44-232ENST00000531118 ETNK2Q9NVF9 386 aa7.93□□□□□ -1.14
CD44-232ENST00000531118 DHCR7Q9UBM7 475 aaKnown RBP7.93□□□□□ -1.14
CD44-232ENST00000531118 SERTAD3Q9UJW9 196 aa7.93□□□□□ -1.14
CD44-232ENST00000531118 RPL26L1Q9UNX3 145 aaKnown RBP7.93□□□□□ -1.14
CD44-232ENST00000531118 MEMO1Q9Y316 297 aa7.93□□□□□ -1.14
CD44-232ENST00000531118 ANK3Q12955 4377 aaKnown RBP7.93□□□□□ -1.14
CD44-232ENST00000531118 DYTNA2CJ06 578 aa7.92□□□□□ -1.14
CD44-232ENST00000531118 H3BMH7 237 aa7.92□□□□□ -1.14
CD44-232ENST00000531118 MATN2O00339 956 aa7.92□□□□□ -1.14
CD44-232ENST00000531118 BIN1O00499 593 aa7.92□□□□□ -1.14
CD44-232ENST00000531118 PMPCBO75439 489 aa7.92□□□□□ -1.14
CD44-232ENST00000531118 GFPT2O94808 682 aa7.92□□□□□ -1.14
CD44-232ENST00000531118 KLHL18O94889 574 aa7.92□□□□□ -1.14
CD44-232ENST00000531118 C8BP07358 591 aa7.92□□□□□ -1.14
CD44-232ENST00000531118 PVRP15151 417 aa7.92□□□□□ -1.14
CD44-232ENST00000531118 UCHL3P15374 230 aa7.92□□□□□ -1.14
CD44-232ENST00000531118 CD33P20138 364 aa7.92□□□□□ -1.14
CD44-232ENST00000531118 PMP22Q01453 160 aa7.92□□□□□ -1.14
CD44-232ENST00000531118 ITKQ08881 620 aa7.92□□□□□ -1.14
CD44-232ENST00000531118 NFE2L1Q14494 772 aa7.92□□□□□ -1.14
CD44-232ENST00000531118 CEBPEQ15744 281 aa7.92□□□□□ -1.14
CD44-232ENST00000531118 MAN2A1Q16706 1144 aa7.92□□□□□ -1.14
CD44-232ENST00000531118 CLEC16AQ2KHT3 1053 aa7.92□□□□□ -1.14
CD44-232ENST00000531118 NKAIN1Q4KMZ8 207 aa7.92□□□□□ -1.14
CD44-232ENST00000531118 KLHDC7AQ5VTJ3 777 aa7.92□□□□□ -1.14
CD44-232ENST00000531118 TMCO3Q6UWJ1 677 aa7.92□□□□□ -1.14
CD44-232ENST00000531118 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP7.92□□□□□ -1.14
CD44-232ENST00000531118 TEX26Q8N6G2 289 aa7.92□□□□□ -1.14
CD44-232ENST00000531118 ADAMTS18Q8TE60 1221 aa7.92□□□□□ -1.14
CD44-232ENST00000531118 ZFPM2Q8WW38 1151 aa7.92□□□□□ -1.14
CD44-232ENST00000531118 FKBP10Q96AY3 582 aa7.92□□□□□ -1.14
CD44-232ENST00000531118 NACC2Q96BF6 587 aa7.92□□□□□ -1.14
CD44-232ENST00000531118 C12orf66Q96MD2 445 aa7.92□□□□□ -1.14
CD44-232ENST00000531118 PCDHB18PQ96TA0 734 aa7.92□□□□□ -1.14
CD44-232ENST00000531118 KLHL25Q9H0H3 589 aa7.92□□□□□ -1.14
CD44-232ENST00000531118 DEF6Q9H4E7 631 aa7.92□□□□□ -1.14
CD44-232ENST00000531118 PCDH9Q9HC56 1237 aa7.92□□□□□ -1.14
CD44-232ENST00000531118 CWC15Q9P013 229 aaKnown RBP7.92□□□□□ -1.14
CD44-232ENST00000531118 PCSK1NQ9UHG2 260 aa7.92□□□□□ -1.14
CD44-232ENST00000531118 HOOK1Q9UJC3 728 aaKnown RBP7.92□□□□□ -1.14
CD44-232ENST00000531118 TTLL3Q9Y4R7 772 aa7.92□□□□□ -1.14
CD44-232ENST00000531118 C17orf113A0A1B0GUU1 675 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms