RNA–Protein interactions for RNA: ENST00000528149.5

CCDC90B-210, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 987 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-210ENST00000528149 CPNE1Q99829 537 aa11.3□□□□□ -0.6
CCDC90B-210ENST00000528149 CCM2Q9BSQ5 444 aa11.3□□□□□ -0.6
CCDC90B-210ENST00000528149 FUT8Q9BYC5 575 aa11.3□□□□□ -0.6
CCDC90B-210ENST00000528149 CCDC68Q9H2F9 335 aa11.3□□□□□ -0.6
CCDC90B-210ENST00000528149 RHOJQ9H4E5 214 aa11.3□□□□□ -0.6
CCDC90B-210ENST00000528149 SYNDIG1Q9H7V2 258 aa11.3□□□□□ -0.6
CCDC90B-210ENST00000528149 COG4Q9H9E3 785 aa11.3□□□□□ -0.6
CCDC90B-210ENST00000528149 NSMCE4AQ9NXX6 385 aa11.3□□□□□ -0.6
CCDC90B-210ENST00000528149 SCHIP1Q9P0W5 487 aaPredicted RBP11.3□□□□□ -0.6
CCDC90B-210ENST00000528149 TXNDC16Q9P2K2 825 aa11.3□□□□□ -0.6
CCDC90B-210ENST00000528149 GALPQ9UBC7 116 aa11.3□□□□□ -0.6
CCDC90B-210ENST00000528149 RNF215Q9Y6U7 377 aa11.3□□□□□ -0.6
CCDC90B-210ENST00000528149 EXOC1LA0A1B0GW35 172 aa11.29□□□□□ -0.6
CCDC90B-210ENST00000528149 FAM95CA0A1B0GW59 222 aa11.29□□□□□ -0.6
CCDC90B-210ENST00000528149 MGAT4DA6NG13 374 aa11.29□□□□□ -0.6
CCDC90B-210ENST00000528149 PRR19A6NJB7 356 aa11.29□□□□□ -0.6
CCDC90B-210ENST00000528149 PDZK1P1A8MUH7 402 aa11.29□□□□□ -0.6
CCDC90B-210ENST00000528149 E5RI56 91 aa11.29□□□□□ -0.6
CCDC90B-210ENST00000528149 POC1B-GALNT4F8VUJ3 575 aa11.29□□□□□ -0.6
CCDC90B-210ENST00000528149 F8W8V4 182 aa11.29□□□□□ -0.6
CCDC90B-210ENST00000528149 CTIFO43310 598 aaKnown RBP11.29□□□□□ -0.6
CCDC90B-210ENST00000528149 SHBGP04278 402 aa11.29□□□□□ -0.6
CCDC90B-210ENST00000528149 CKMT1AP12532 417 aa11.29□□□□□ -0.6
CCDC90B-210ENST00000528149 VCLP18206 1134 aa11.29□□□□□ -0.6
CCDC90B-210ENST00000528149 RPL10P27635 214 aaKnown RBP11.29□□□□□ -0.6
CCDC90B-210ENST00000528149 HSD17B3P37058 310 aa11.29□□□□□ -0.6
CCDC90B-210ENST00000528149 GP5P40197 560 aa11.29□□□□□ -0.6
CCDC90B-210ENST00000528149 CCR10P46092 362 aa11.29□□□□□ -0.6
CCDC90B-210ENST00000528149 PDX1P52945 283 aa11.29□□□□□ -0.6
CCDC90B-210ENST00000528149 ADARP55265 1226 aaKnown RBP11.29□□□□□ -0.6
CCDC90B-210ENST00000528149 CDKN2DP55273 166 aa11.29□□□□□ -0.6
CCDC90B-210ENST00000528149 DMPKQ09013 629 aa11.29□□□□□ -0.6
CCDC90B-210ENST00000528149 SLC29A2Q14542 456 aa11.29□□□□□ -0.6
CCDC90B-210ENST00000528149 LINC00303Q3SY05 128 aa11.29□□□□□ -0.6
CCDC90B-210ENST00000528149 MAP9Q49MG5 647 aa11.29□□□□□ -0.6
CCDC90B-210ENST00000528149 SYTL3Q4VX76 610 aa11.29□□□□□ -0.6
CCDC90B-210ENST00000528149 ZCCHC8Q6NZY4 707 aaKnown RBP11.29□□□□□ -0.6
CCDC90B-210ENST00000528149 CYS1Q717R9 158 aa11.29□□□□□ -0.6
CCDC90B-210ENST00000528149 ACVR1CQ8NER5 493 aa11.29□□□□□ -0.6
CCDC90B-210ENST00000528149 OR2L2Q8NH16 312 aa11.29□□□□□ -0.6
CCDC90B-210ENST00000528149 GIMAP7Q8NHV1 300 aa11.29□□□□□ -0.6
CCDC90B-210ENST00000528149 JPH3Q8WXH2 748 aaPredicted RBP11.29□□□□□ -0.6
CCDC90B-210ENST00000528149 PANX3Q96QZ0 392 aa11.29□□□□□ -0.6
CCDC90B-210ENST00000528149 CYTH2Q99418 400 aa11.29□□□□□ -0.6
CCDC90B-210ENST00000528149 PAFAH2Q99487 392 aa11.29□□□□□ -0.6
CCDC90B-210ENST00000528149 GPR21Q99679 349 aa11.29□□□□□ -0.6
CCDC90B-210ENST00000528149 RBBP8Q99708 897 aa11.29□□□□□ -0.6
CCDC90B-210ENST00000528149 SLC30A3Q99726 388 aa11.29□□□□□ -0.6
CCDC90B-210ENST00000528149 NRTNQ99748 197 aa11.29□□□□□ -0.6
CCDC90B-210ENST00000528149 OLFM1Q99784 485 aa11.29□□□□□ -0.6
CCDC90B-210ENST00000528149 MCMBPQ9BTE3 642 aa11.29□□□□□ -0.6
CCDC90B-210ENST00000528149 TSSK1BQ9BXA7 367 aa11.29□□□□□ -0.6
CCDC90B-210ENST00000528149 PRDM8Q9NQV8 689 aa11.29□□□□□ -0.6
CCDC90B-210ENST00000528149 TBC1D29Q9UFV1 150 aa11.29□□□□□ -0.6
CCDC90B-210ENST00000528149 PSMD13Q9UNM6 376 aa11.29□□□□□ -0.6
CCDC90B-210ENST00000528149 SRPK3Q9UPE1 567 aa11.29□□□□□ -0.6
CCDC90B-210ENST00000528149 MED16Q9Y2X0 877 aa11.29□□□□□ -0.6
CCDC90B-210ENST00000528149 CSNK1G3Q9Y6M4 447 aa11.29□□□□□ -0.6
CCDC90B-210ENST00000528149 UNC13CQ8NB66 2214 aa11.28□□□□□ -0.6
CCDC90B-210ENST00000528149 H3BMM5 538 aa11.28□□□□□ -0.6
CCDC90B-210ENST00000528149 TUBBP07437 444 aa11.28□□□□□ -0.6
CCDC90B-210ENST00000528149 CHRM3P20309 590 aa11.28□□□□□ -0.6
CCDC90B-210ENST00000528149 SAT1P21673 171 aa11.28□□□□□ -0.6
CCDC90B-210ENST00000528149 ACP1P24666 158 aa11.28□□□□□ -0.6
CCDC90B-210ENST00000528149 AOAHP28039 575 aa11.28□□□□□ -0.6
CCDC90B-210ENST00000528149 CCR7P32248 378 aa11.28□□□□□ -0.6
CCDC90B-210ENST00000528149 CLCNKAP51800 687 aa11.28□□□□□ -0.6
CCDC90B-210ENST00000528149 LIMK2P53671 638 aa11.28□□□□□ -0.6
CCDC90B-210ENST00000528149 TIAL1Q01085 375 aaKnown RBP eCLIP11.28□□□□□ -0.6
CCDC90B-210ENST00000528149 TLE1Q04724 770 aa11.28□□□□□ -0.6
CCDC90B-210ENST00000528149 BMPR2Q13873 1038 aa11.28□□□□□ -0.6
CCDC90B-210ENST00000528149 TMED2Q15363 201 aa11.28□□□□□ -0.6
CCDC90B-210ENST00000528149 NR0B2Q15466 257 aa11.28□□□□□ -0.6
CCDC90B-210ENST00000528149 KLHL38Q2WGJ6 581 aa11.28□□□□□ -0.6
CCDC90B-210ENST00000528149 HECTD2Q5U5R9 776 aa11.28□□□□□ -0.6
CCDC90B-210ENST00000528149 HIST2H2BCQ6DN03 193 aa11.28□□□□□ -0.6
CCDC90B-210ENST00000528149 CCDC81Q6ZN84 652 aa11.28□□□□□ -0.6
CCDC90B-210ENST00000528149 B3GNT8Q7Z7M8 397 aa11.28□□□□□ -0.6
CCDC90B-210ENST00000528149 VRK3Q8IV63 474 aa11.28□□□□□ -0.6
CCDC90B-210ENST00000528149 CFAP206Q8IYR0 622 aa11.28□□□□□ -0.6
CCDC90B-210ENST00000528149 LSMEM2Q8N112 164 aa11.28□□□□□ -0.6
CCDC90B-210ENST00000528149 NAGSQ8N159 534 aa11.28□□□□□ -0.6
CCDC90B-210ENST00000528149 SDR16C5Q8N3Y7 309 aa11.28□□□□□ -0.6
CCDC90B-210ENST00000528149 Q8N9G6 341 aaPredicted RBP11.28□□□□□ -0.6
CCDC90B-210ENST00000528149 SIDT2Q8NBJ9 832 aaKnown RBP11.28□□□□□ -0.6
CCDC90B-210ENST00000528149 GPR156Q8NFN8 814 aa11.28□□□□□ -0.6
CCDC90B-210ENST00000528149 ZDHHC1Q8WTX9 485 aa11.28□□□□□ -0.6
CCDC90B-210ENST00000528149 SLC44A1Q8WWI5 657 aa11.28□□□□□ -0.6
CCDC90B-210ENST00000528149 RNF31Q96EP0 1072 aa11.28□□□□□ -0.6
CCDC90B-210ENST00000528149 RMDN2Q96LZ7 410 aa11.28□□□□□ -0.6
CCDC90B-210ENST00000528149 CCDC3Q9BQI4 270 aa11.28□□□□□ -0.6
CCDC90B-210ENST00000528149 WWP1Q9H0M0 922 aa11.28□□□□□ -0.6
CCDC90B-210ENST00000528149 DPEP2Q9H4A9 486 aa11.28□□□□□ -0.6
CCDC90B-210ENST00000528149 THSD1Q9NS62 852 aa11.28□□□□□ -0.6
CCDC90B-210ENST00000528149 ATXN7L1Q9ULK2 861 aaPredicted RBP11.28□□□□□ -0.6
CCDC90B-210ENST00000528149 CORO1CQ9ULV4 474 aaPredicted RBP11.28□□□□□ -0.6
CCDC90B-210ENST00000528149 MAN2B2Q9Y2E5 1009 aa11.28□□□□□ -0.6
CCDC90B-210ENST00000528149 WDR37Q9Y2I8 494 aa11.28□□□□□ -0.6
CCDC90B-210ENST00000528149 MTO1Q9Y2Z2 717 aaKnown RBP11.28□□□□□ -0.6
CCDC90B-210ENST00000528149 COMMD10Q9Y6G5 202 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms