RNA–Protein interactions for RNA: ENST00000527299.1

CLNS1A-209, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 2

Gene CLNS1A, Length 387 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-209ENST00000527299 CYTH4Q9UIA0 394 aa3.66□□□□□ -1.82
CLNS1A-209ENST00000527299 MAN1B1Q9UKM7 699 aa3.66□□□□□ -1.82
CLNS1A-209ENST00000527299 CAPN11Q9UMQ6 739 aa3.66□□□□□ -1.82
CLNS1A-209ENST00000527299 GAB2Q9UQC2 676 aa3.66□□□□□ -1.82
CLNS1A-209ENST00000527299 SNX24Q9Y343 169 aa3.66□□□□□ -1.82
CLNS1A-209ENST00000527299 NOC2LQ9Y3T9 749 aaKnown RBP3.66□□□□□ -1.82
CLNS1A-209ENST00000527299 UGT2A1Q9Y4X1 527 aa3.66□□□□□ -1.82
CLNS1A-209ENST00000527299 PCDHA3Q9Y5H8 950 aa3.66□□□□□ -1.82
CLNS1A-209ENST00000527299 HEMK1Q9Y5R4 338 aaPredicted RBP3.66□□□□□ -1.82
CLNS1A-209ENST00000527299 SNX13Q9Y5W8 968 aa3.66□□□□□ -1.82
CLNS1A-209ENST00000527299 ABCA8O94911 1581 aa3.66□□□□□ -1.82
CLNS1A-209ENST00000527299 CDC42BPGQ6DT37 1551 aa3.66□□□□□ -1.82
CLNS1A-209ENST00000527299 TAF1P21675 1872 aa3.66□□□□□ -1.82
CLNS1A-209ENST00000527299 SF3B1O75533 1304 aaKnown RBP eCLIP3.66□□□□□ -1.82
CLNS1A-209ENST00000527299 MYH3P11055 1940 aa3.66□□□□□ -1.82
CLNS1A-209ENST00000527299 LAMA4Q16363 1823 aa3.65□□□□□ -1.82
CLNS1A-209ENST00000527299 PARP4Q9UKK3 1724 aaKnown RBP3.65□□□□□ -1.82
CLNS1A-209ENST00000527299 MST1RQ04912 1400 aa3.65□□□□□ -1.83
CLNS1A-209ENST00000527299 A0A087WXM4 84 aa3.65□□□□□ -1.83
CLNS1A-209ENST00000527299 A0A0X1KG70 313 aa3.65□□□□□ -1.83
CLNS1A-209ENST00000527299 TMEM120BA0PK00 339 aa3.65□□□□□ -1.83
CLNS1A-209ENST00000527299 ZNF891A8MT65 544 aaPredicted RBP3.65□□□□□ -1.83
CLNS1A-209ENST00000527299 CENPXA8MT69 81 aa3.65□□□□□ -1.83
CLNS1A-209ENST00000527299 H3BMQ9 156 aa3.65□□□□□ -1.83
CLNS1A-209ENST00000527299 H3BNH8 94 aa3.65□□□□□ -1.83
CLNS1A-209ENST00000527299 PER2O15055 1255 aa3.65□□□□□ -1.83
CLNS1A-209ENST00000527299 YY2O15391 372 aa3.65□□□□□ -1.83
CLNS1A-209ENST00000527299 MPPED1O15442 326 aa3.65□□□□□ -1.83
CLNS1A-209ENST00000527299 PIP5K1CO60331 668 aa3.65□□□□□ -1.83
CLNS1A-209ENST00000527299 EDF1O60869 148 aaKnown RBP3.65□□□□□ -1.83
CLNS1A-209ENST00000527299 NOL3O60936 208 aaKnown RBP3.65□□□□□ -1.83
CLNS1A-209ENST00000527299 CAMTA2O94983 1202 aa3.65□□□□□ -1.83
CLNS1A-209ENST00000527299 PRSS23O95084 383 aa3.65□□□□□ -1.83
CLNS1A-209ENST00000527299 H6PDO95479 791 aa3.65□□□□□ -1.83
CLNS1A-209ENST00000527299 IL33O95760 270 aa3.65□□□□□ -1.83
CLNS1A-209ENST00000527299 NDST3O95803 873 aa3.65□□□□□ -1.83
CLNS1A-209ENST00000527299 POMCP01189 267 aa3.65□□□□□ -1.83
CLNS1A-209ENST00000527299 GH2P01242 217 aa3.65□□□□□ -1.83
CLNS1A-209ENST00000527299 UGT2B4P06133 528 aa3.65□□□□□ -1.83
CLNS1A-209ENST00000527299 FABP1P07148 127 aa3.65□□□□□ -1.83
CLNS1A-209ENST00000527299 ASGR1P07306 291 aa3.65□□□□□ -1.83
CLNS1A-209ENST00000527299 YES1P07947 543 aa3.65□□□□□ -1.83
CLNS1A-209ENST00000527299 CYP21A2P08686 494 aa3.65□□□□□ -1.83
CLNS1A-209ENST00000527299 KRT19P08727 400 aa3.65□□□□□ -1.83
CLNS1A-209ENST00000527299 HOXD4P09016 255 aaPredicted RBP3.65□□□□□ -1.83
CLNS1A-209ENST00000527299 ELFN1P0C7U0 828 aa3.65□□□□□ -1.83
CLNS1A-209ENST00000527299 UBTFL1P0CB47 393 aaPredicted RBP3.65□□□□□ -1.83
CLNS1A-209ENST00000527299 PRR35P0CG20 571 aa3.65□□□□□ -1.83
CLNS1A-209ENST00000527299 SRGAP2BP0DMP2 458 aa3.65□□□□□ -1.83
CLNS1A-209ENST00000527299 ANXA8P13928 327 aa3.65□□□□□ -1.83
CLNS1A-209ENST00000527299 GNSP15586 552 aa3.65□□□□□ -1.83
CLNS1A-209ENST00000527299 GJA1P17302 382 aa3.65□□□□□ -1.83
CLNS1A-209ENST00000527299 RAB4AP20338 218 aa3.65□□□□□ -1.83
CLNS1A-209ENST00000527299 KELP23276 732 aa3.65□□□□□ -1.83
CLNS1A-209ENST00000527299 OXTRP30559 389 aa3.65□□□□□ -1.83
CLNS1A-209ENST00000527299 CYP2C18P33260 490 aa3.65□□□□□ -1.83
CLNS1A-209ENST00000527299 HMGCLP35914 325 aa3.65□□□□□ -1.83
CLNS1A-209ENST00000527299 DDOSTP39656 456 aa3.65□□□□□ -1.83
CLNS1A-209ENST00000527299 EIF2S3P41091 472 aaKnown RBP3.65□□□□□ -1.83
CLNS1A-209ENST00000527299 ETV5P41161 510 aa3.65□□□□□ -1.83
CLNS1A-209ENST00000527299 GRIA3P42263 894 aa3.65□□□□□ -1.83
CLNS1A-209ENST00000527299 GSTM5P46439 218 aa3.65□□□□□ -1.83
CLNS1A-209ENST00000527299 YAP1P46937 504 aaKnown RBP3.65□□□□□ -1.83
CLNS1A-209ENST00000527299 PRIM2P49643 509 aa3.65□□□□□ -1.83
CLNS1A-209ENST00000527299 SERPINH1P50454 418 aaKnown RBP3.65□□□□□ -1.83
CLNS1A-209ENST00000527299 P2RY4P51582 365 aa3.65□□□□□ -1.83
CLNS1A-209ENST00000527299 DGKQP52824 942 aa3.65□□□□□ -1.83
CLNS1A-209ENST00000527299 DRG2P55039 364 aaKnown RBP3.65□□□□□ -1.83
CLNS1A-209ENST00000527299 FOXG1P55316 489 aaPredicted RBP3.65□□□□□ -1.83
CLNS1A-209ENST00000527299 IFI35P80217 286 aaPredicted RBP3.65□□□□□ -1.83
CLNS1A-209ENST00000527299 TXNL4AP83876 142 aaKnown RBP3.65□□□□□ -1.83
CLNS1A-209ENST00000527299 IL9RQ01113 521 aa3.65□□□□□ -1.83
CLNS1A-209ENST00000527299 CREMQ03060 361 aa3.65□□□□□ -1.83
CLNS1A-209ENST00000527299 BST2Q10589 180 aaKnown RBP3.65□□□□□ -1.83
CLNS1A-209ENST00000527299 BFSP1Q12934 665 aa3.65□□□□□ -1.83
CLNS1A-209ENST00000527299 GRM1Q13255 1194 aa3.65□□□□□ -1.83
CLNS1A-209ENST00000527299 KRR1Q13601 381 aaKnown RBP3.65□□□□□ -1.83
CLNS1A-209ENST00000527299 RAPSNQ13702 412 aa3.65□□□□□ -1.83
CLNS1A-209ENST00000527299 KCNC3Q14003 757 aa3.65□□□□□ -1.83
CLNS1A-209ENST00000527299 NECTIN1Q15223 517 aa3.65□□□□□ -1.83
CLNS1A-209ENST00000527299 SPA17Q15506 151 aa3.65□□□□□ -1.83
CLNS1A-209ENST00000527299 TAF1BQ53T94 588 aaPredicted RBP3.65□□□□□ -1.83
CLNS1A-209ENST00000527299 RUNDC3AQ59EK9 446 aa3.65□□□□□ -1.83
CLNS1A-209ENST00000527299 MDH1BQ5I0G3 518 aa3.65□□□□□ -1.83
CLNS1A-209ENST00000527299 SAPCD1Q5SSQ6 148 aa3.65□□□□□ -1.83
CLNS1A-209ENST00000527299 FAM83BQ5T0W9 1011 aa3.65□□□□□ -1.83
CLNS1A-209ENST00000527299 THEM4Q5T1C6 240 aa3.65□□□□□ -1.83
CLNS1A-209ENST00000527299 PDSS1Q5T2R2 415 aa3.65□□□□□ -1.83
CLNS1A-209ENST00000527299 TSTD2Q5T7W7 516 aa3.65□□□□□ -1.83
CLNS1A-209ENST00000527299 INTS11Q5TA45 600 aaKnown RBP3.65□□□□□ -1.83
CLNS1A-209ENST00000527299 SLC9C2Q5TAH2 1124 aa3.65□□□□□ -1.83
CLNS1A-209ENST00000527299 ANXA8L1Q5VT79 327 aa3.65□□□□□ -1.83
CLNS1A-209ENST00000527299 ATG16L1Q676U5 607 aa3.65□□□□□ -1.83
CLNS1A-209ENST00000527299 PYHIN1Q6K0P9 492 aa3.65□□□□□ -1.83
CLNS1A-209ENST00000527299 LIN54Q6MZP7 749 aa3.65□□□□□ -1.83
CLNS1A-209ENST00000527299 RINT1Q6NUQ1 792 aa3.65□□□□□ -1.83
CLNS1A-209ENST00000527299 ZNF544Q6NX49 715 aa3.65□□□□□ -1.83
CLNS1A-209ENST00000527299 C3orf33Q6P1S2 294 aa3.65□□□□□ -1.83
CLNS1A-209ENST00000527299 MZT2AQ6P582 158 aa3.65□□□□□ -1.83
CLNS1A-209ENST00000527299 TMEM65Q6PI78 240 aa3.65□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 105.7 ms