RNA–Protein interactions for RNA: ENST00000525276.1

CTTN-209, Transcript of cortactin, humanhuman

TSL 3

Gene CTTN, Length 584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-209ENST00000525276 TRIM44Q96DX7 344 aaPredicted RBP11.15□□□□□ -0.62
CTTN-209ENST00000525276 SNF8Q96H20 258 aa11.15□□□□□ -0.62
CTTN-209ENST00000525276 ARHGAP9Q9BRR9 750 aa11.15□□□□□ -0.62
CTTN-209ENST00000525276 TRIM56Q9BRZ2 755 aaKnown RBP11.15□□□□□ -0.62
CTTN-209ENST00000525276 CARD6Q9BX69 1037 aa11.15□□□□□ -0.62
CTTN-209ENST00000525276 SLC12A9Q9BXP2 914 aa11.15□□□□□ -0.62
CTTN-209ENST00000525276 OR52A5Q9H2C5 316 aa11.15□□□□□ -0.62
CTTN-209ENST00000525276 OGFRQ9NZT2 677 aa11.15□□□□□ -0.62
CTTN-209ENST00000525276 TMEM9Q9P0T7 183 aa11.15□□□□□ -0.62
CTTN-209ENST00000525276 GNPTGQ9UJJ9 305 aa11.15□□□□□ -0.62
CTTN-209ENST00000525276 AKAP9Q99996 3911 aa11.15□□□□□ -0.63
CTTN-209ENST00000525276 MN1Q10571 1320 aaPredicted RBP11.14□□□□□ -0.63
CTTN-209ENST00000525276 ZCWPW2A0A1B0GU75 182 aa11.14□□□□□ -0.63
CTTN-209ENST00000525276 UBA6A0AVT1 1052 aaPredicted RBP11.14□□□□□ -0.63
CTTN-209ENST00000525276 SLC5A10A0PJK1 596 aa11.14□□□□□ -0.63
CTTN-209ENST00000525276 FAM187AA6NFU0 413 aa11.14□□□□□ -0.63
CTTN-209ENST00000525276 EFCAB8A8MWE9 144 aa11.14□□□□□ -0.63
CTTN-209ENST00000525276 IQCJ-SCHIP1C9J366 451 aaPredicted RBP11.14□□□□□ -0.63
CTTN-209ENST00000525276 GOLGA8KD6RF30 607 aa11.14□□□□□ -0.63
CTTN-209ENST00000525276 GOLGA8TH3BQL2 631 aa11.14□□□□□ -0.63
CTTN-209ENST00000525276 SEC31AO94979 1220 aaKnown RBP11.14□□□□□ -0.63
CTTN-209ENST00000525276 PGAM1P18669 254 aa11.14□□□□□ -0.63
CTTN-209ENST00000525276 RPS3P23396 243 aaKnown RBP eCLIP11.14□□□□□ -0.63
CTTN-209ENST00000525276 PDHA2P29803 388 aa11.14□□□□□ -0.63
CTTN-209ENST00000525276 CSTF2P33240 577 aaKnown RBP eCLIP11.14□□□□□ -0.63
CTTN-209ENST00000525276 CAPZBP47756 277 aa11.14□□□□□ -0.63
CTTN-209ENST00000525276 ITGA8P53708 1063 aa11.14□□□□□ -0.63
CTTN-209ENST00000525276 EIF3BP55884 814 aaKnown RBP11.14□□□□□ -0.63
CTTN-209ENST00000525276 FOXK1P85037 733 aa11.14□□□□□ -0.63
CTTN-209ENST00000525276 CKAP4Q07065 602 aaKnown RBP11.14□□□□□ -0.63
CTTN-209ENST00000525276 DHX9Q08211 1270 aaKnown RBP11.14□□□□□ -0.63
CTTN-209ENST00000525276 C2orf54Q08AI8 447 aa11.14□□□□□ -0.63
CTTN-209ENST00000525276 BRD3Q15059 726 aa11.14□□□□□ -0.63
CTTN-209ENST00000525276 TMED2Q15363 201 aa11.14□□□□□ -0.63
CTTN-209ENST00000525276 IGFBP7Q16270 282 aa11.14□□□□□ -0.63
CTTN-209ENST00000525276 LONRF1Q17RB8 773 aa11.14□□□□□ -0.63
CTTN-209ENST00000525276 BBS9Q3SYG4 887 aa11.14□□□□□ -0.63
CTTN-209ENST00000525276 SNAP47Q5SQN1 464 aa11.14□□□□□ -0.63
CTTN-209ENST00000525276 MANEAQ5SRI9 462 aa11.14□□□□□ -0.63
CTTN-209ENST00000525276 HIBCHQ6NVY1 386 aaPredicted RBP11.14□□□□□ -0.63
CTTN-209ENST00000525276 MAATS1Q7Z4T9 603 aa11.14□□□□□ -0.63
CTTN-209ENST00000525276 PDIK1LQ8N165 341 aa11.14□□□□□ -0.63
CTTN-209ENST00000525276 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.14□□□□□ -0.63
CTTN-209ENST00000525276 BBOF1Q8ND07 529 aa11.14□□□□□ -0.63
CTTN-209ENST00000525276 RCBTB1Q8NDN9 531 aa11.14□□□□□ -0.63
CTTN-209ENST00000525276 LPGAT1Q92604 370 aa11.14□□□□□ -0.63
CTTN-209ENST00000525276 USP7Q93009 1102 aa11.14□□□□□ -0.63
CTTN-209ENST00000525276 PANX3Q96QZ0 392 aa11.14□□□□□ -0.63
CTTN-209ENST00000525276 FERD3LQ96RJ6 166 aa11.14□□□□□ -0.63
CTTN-209ENST00000525276 NAT9Q9BTE0 207 aa11.14□□□□□ -0.63
CTTN-209ENST00000525276 TRIM31Q9BZY9 425 aa11.14□□□□□ -0.63
CTTN-209ENST00000525276 P2RY12Q9H244 342 aa11.14□□□□□ -0.63
CTTN-209ENST00000525276 KIR3DX1Q9H7L2 352 aa11.14□□□□□ -0.63
CTTN-209ENST00000525276 MVB12BQ9H7P6 319 aa11.14□□□□□ -0.63
CTTN-209ENST00000525276 C20orf96Q9NUD7 363 aaPredicted RBP11.14□□□□□ -0.63
CTTN-209ENST00000525276 WDR70Q9NW82 654 aa11.14□□□□□ -0.63
CTTN-209ENST00000525276 SLC24A2Q9UI40 661 aa11.14□□□□□ -0.63
CTTN-209ENST00000525276 VPS9D1Q9Y2B5 631 aa11.14□□□□□ -0.63
CTTN-209ENST00000525276 IQCF5A8MTL0 148 aa11.13□□□□□ -0.63
CTTN-209ENST00000525276 A8MU76 341 aa11.13□□□□□ -0.63
CTTN-209ENST00000525276 H3BMM5 538 aa11.13□□□□□ -0.63
CTTN-209ENST00000525276 CAPN5O15484 640 aaPredicted RBP11.13□□□□□ -0.63
CTTN-209ENST00000525276 TTC4O95801 387 aa11.13□□□□□ -0.63
CTTN-209ENST00000525276 C9P02748 559 aa11.13□□□□□ -0.63
CTTN-209ENST00000525276 ESR1P03372 595 aa11.13□□□□□ -0.63
CTTN-209ENST00000525276 TUBB4AP04350 444 aa11.13□□□□□ -0.63
CTTN-209ENST00000525276 APOA4P06727 396 aa11.13□□□□□ -0.63
CTTN-209ENST00000525276 SFTPCP11686 197 aa11.13□□□□□ -0.63
CTTN-209ENST00000525276 GP1BBP13224 206 aa11.13□□□□□ -0.63
CTTN-209ENST00000525276 CCR7P32248 378 aa11.13□□□□□ -0.63
CTTN-209ENST00000525276 ADARP55265 1226 aaKnown RBP11.13□□□□□ -0.63
CTTN-209ENST00000525276 GFERP55789 205 aa11.13□□□□□ -0.63
CTTN-209ENST00000525276 ARL4CP56559 192 aa11.13□□□□□ -0.63
CTTN-209ENST00000525276 ZNF470Q6ECI4 717 aa11.13□□□□□ -0.63
CTTN-209ENST00000525276 NAPRTQ6XQN6 538 aa11.13□□□□□ -0.63
CTTN-209ENST00000525276 ZNF572Q7Z3I7 529 aaPredicted RBP11.13□□□□□ -0.63
CTTN-209ENST00000525276 ARHGAP22Q7Z5H3 698 aa11.13□□□□□ -0.63
CTTN-209ENST00000525276 PTRH1Q86Y79 214 aaKnown RBP11.13□□□□□ -0.63
CTTN-209ENST00000525276 CILP2Q8IUL8 1156 aa11.13□□□□□ -0.63
CTTN-209ENST00000525276 LMNTD2Q8IXW0 634 aa11.13□□□□□ -0.63
CTTN-209ENST00000525276 KRT222Q8N1A0 295 aa11.13□□□□□ -0.63
CTTN-209ENST00000525276 ACVR1CQ8NER5 493 aa11.13□□□□□ -0.63
CTTN-209ENST00000525276 LKAAEAR1Q8TD35 194 aa11.13□□□□□ -0.63
CTTN-209ENST00000525276 CALML6Q8TD86 181 aa11.13□□□□□ -0.63
CTTN-209ENST00000525276 ASZ1Q8WWH4 475 aa11.13□□□□□ -0.63
CTTN-209ENST00000525276 JPH3Q8WXH2 748 aaPredicted RBP11.13□□□□□ -0.63
CTTN-209ENST00000525276 RSC1A1Q92681 617 aa11.13□□□□□ -0.63
CTTN-209ENST00000525276 TFGQ92734 400 aaPredicted RBP11.13□□□□□ -0.63
CTTN-209ENST00000525276 ZDHHC12Q96GR4 267 aa11.13□□□□□ -0.63
CTTN-209ENST00000525276 C9orf72Q96LT7 481 aa11.13□□□□□ -0.63
CTTN-209ENST00000525276 TGM7Q96PF1 710 aa11.13□□□□□ -0.63
CTTN-209ENST00000525276 PSMG3-AS1Q96PY0 264 aa11.13□□□□□ -0.63
CTTN-209ENST00000525276 EBNA1BP2Q99848 306 aaKnown RBP11.13□□□□□ -0.63
CTTN-209ENST00000525276 ERP44Q9BS26 406 aa11.13□□□□□ -0.63
CTTN-209ENST00000525276 RAB33BQ9H082 229 aa11.13□□□□□ -0.63
CTTN-209ENST00000525276 INTS10Q9NVR2 710 aaKnown RBP11.13□□□□□ -0.63
CTTN-209ENST00000525276 IL1RAPL1Q9NZN1 696 aa11.13□□□□□ -0.63
CTTN-209ENST00000525276 EPHA6Q9UF33 1036 aa11.13□□□□□ -0.63
CTTN-209ENST00000525276 KLHL3Q9UH77 587 aa11.13□□□□□ -0.63
CTTN-209ENST00000525276 CDC23Q9UJX2 597 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms