RNA–Protein interactions for RNA: ENST00000523628.5

HDAC2-216, Transcript of histone deacetylase 2, humanhuman

TSL 4

Gene HDAC2, Length 549 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC2-216ENST00000523628 CD58P19256 250 aa4.26□□□□□ -1.73
HDAC2-216ENST00000523628 PTMSP20962 102 aa4.26□□□□□ -1.73
HDAC2-216ENST00000523628 RBL1P28749 1068 aa4.26□□□□□ -1.73
HDAC2-216ENST00000523628 EPHA3P29320 983 aa4.26□□□□□ -1.73
HDAC2-216ENST00000523628 KRT9P35527 623 aa4.26□□□□□ -1.73
HDAC2-216ENST00000523628 RAD23BP54727 409 aa4.26□□□□□ -1.73
HDAC2-216ENST00000523628 DAOAP59103 153 aa4.26□□□□□ -1.73
HDAC2-216ENST00000523628 YWHAZP63104 245 aaKnown RBP4.26□□□□□ -1.73
HDAC2-216ENST00000523628 E2F1Q01094 437 aa4.26□□□□□ -1.73
HDAC2-216ENST00000523628 KDSRQ06136 332 aa4.26□□□□□ -1.73
HDAC2-216ENST00000523628 RAD51Q06609 339 aa4.26□□□□□ -1.73
HDAC2-216ENST00000523628 NSUN2Q08J23 767 aaKnown RBP eCLIP4.26□□□□□ -1.73
HDAC2-216ENST00000523628 ADIGQ0VDE8 80 aa4.26□□□□□ -1.73
HDAC2-216ENST00000523628 SYCP1Q15431 976 aa4.26□□□□□ -1.73
HDAC2-216ENST00000523628 EXOC3L4Q17RC7 722 aa4.26□□□□□ -1.73
HDAC2-216ENST00000523628 SETMARQ53H47 684 aaPredicted RBP4.26□□□□□ -1.73
HDAC2-216ENST00000523628 BSPRYQ5W0U4 402 aa4.26□□□□□ -1.73
HDAC2-216ENST00000523628 FAM90A2PQ658T7 463 aa4.26□□□□□ -1.73
HDAC2-216ENST00000523628 RETSATQ6NUM9 610 aa4.26□□□□□ -1.73
HDAC2-216ENST00000523628 FAM173BQ6P4H8 233 aa4.26□□□□□ -1.73
HDAC2-216ENST00000523628 TMEM270Q6UE05 265 aa4.26□□□□□ -1.73
HDAC2-216ENST00000523628 KIAA1324Q6UXG2 1013 aaKnown RBP4.26□□□□□ -1.73
HDAC2-216ENST00000523628 PAQR9Q6ZVX9 377 aa4.26□□□□□ -1.73
HDAC2-216ENST00000523628 PIP4P1Q86T03 277 aa4.26□□□□□ -1.73
HDAC2-216ENST00000523628 PEG10Q86TG7 708 aaKnown RBP4.26□□□□□ -1.73
HDAC2-216ENST00000523628 SETD3Q86TU7 594 aaPredicted RBP4.26□□□□□ -1.73
HDAC2-216ENST00000523628 PRPF39Q86UA1 669 aaKnown RBP4.26□□□□□ -1.73
HDAC2-216ENST00000523628 TMPRSS12Q86WS5 348 aa4.26□□□□□ -1.73
HDAC2-216ENST00000523628 KRT73Q86Y46 540 aa4.26□□□□□ -1.73
HDAC2-216ENST00000523628 TMEM25Q86YD3 366 aa4.26□□□□□ -1.73
HDAC2-216ENST00000523628 NAXDQ8IW45 347 aa4.26□□□□□ -1.73
HDAC2-216ENST00000523628 MFN1Q8IWA4 741 aa4.26□□□□□ -1.73
HDAC2-216ENST00000523628 SRRM1Q8IYB3 904 aaKnown RBP4.26□□□□□ -1.73
HDAC2-216ENST00000523628 LSMEM2Q8N112 164 aa4.26□□□□□ -1.73
HDAC2-216ENST00000523628 DCLK2Q8N568 766 aa4.26□□□□□ -1.73
HDAC2-216ENST00000523628 MINDY1Q8N5J2 469 aa4.26□□□□□ -1.73
HDAC2-216ENST00000523628 TMEM35BQ8NCS4 154 aa4.26□□□□□ -1.73
HDAC2-216ENST00000523628 ZMIZ2Q8NF64 920 aa4.26□□□□□ -1.73
HDAC2-216ENST00000523628 ZNF397Q8NF99 534 aaPredicted RBP4.26□□□□□ -1.73
HDAC2-216ENST00000523628 OR2T34Q8NGX1 318 aa4.26□□□□□ -1.73
HDAC2-216ENST00000523628 TAS1R2Q8TE23 839 aa4.26□□□□□ -1.73
HDAC2-216ENST00000523628 SLC35F5Q8WV83 523 aa4.26□□□□□ -1.73
HDAC2-216ENST00000523628 ADAMTS14Q8WXS8 1223 aa4.26□□□□□ -1.73
HDAC2-216ENST00000523628 RAB7BQ96AH8 199 aa4.26□□□□□ -1.73
HDAC2-216ENST00000523628 NXPE2Q96DL1 559 aa4.26□□□□□ -1.73
HDAC2-216ENST00000523628 PGAP3Q96FM1 320 aaPredicted RBP4.26□□□□□ -1.73
HDAC2-216ENST00000523628 PIWIL1Q96J94 861 aaKnown RBP4.26□□□□□ -1.73
HDAC2-216ENST00000523628 PBKQ96KB5 322 aa4.26□□□□□ -1.73
HDAC2-216ENST00000523628 TBATAQ96M53 351 aa4.26□□□□□ -1.73
HDAC2-216ENST00000523628 SLC22A12Q96S37 553 aa4.26□□□□□ -1.73
HDAC2-216ENST00000523628 THAP7Q9BT49 309 aaPredicted RBP4.26□□□□□ -1.73
HDAC2-216ENST00000523628 MECRQ9BV79 373 aa4.26□□□□□ -1.73
HDAC2-216ENST00000523628 CIPCQ9C0C6 399 aa4.26□□□□□ -1.73
HDAC2-216ENST00000523628 PABPC3Q9H361 631 aaKnown RBP4.26□□□□□ -1.73
HDAC2-216ENST00000523628 DPEP3Q9H4B8 488 aa4.26□□□□□ -1.73
HDAC2-216ENST00000523628 SYNCQ9H7C4 482 aa4.26□□□□□ -1.73
HDAC2-216ENST00000523628 GLOD4Q9HC38 313 aa4.26□□□□□ -1.73
HDAC2-216ENST00000523628 GDF3Q9NR23 364 aa4.26□□□□□ -1.73
HDAC2-216ENST00000523628 SERTAD4Q9NUC0 356 aa4.26□□□□□ -1.73
HDAC2-216ENST00000523628 FAM49BQ9NUQ9 324 aa4.26□□□□□ -1.73
HDAC2-216ENST00000523628 CHORDC1Q9UHD1 332 aaPredicted RBP4.26□□□□□ -1.73
HDAC2-216ENST00000523628 GGA2Q9UJY4 613 aa4.26□□□□□ -1.73
HDAC2-216ENST00000523628 AGO1Q9UL18 857 aaKnown RBP4.26□□□□□ -1.73
HDAC2-216ENST00000523628 HPCAL4Q9UM19 191 aa4.26□□□□□ -1.73
HDAC2-216ENST00000523628 CHD6Q8TD26 2715 aa4.26□□□□□ -1.73
HDAC2-216ENST00000523628 CEP192Q8TEP8 1941 aa4.25□□□□□ -1.73
HDAC2-216ENST00000523628 A0A1W2PQF6 199 aa4.25□□□□□ -1.73
HDAC2-216ENST00000523628 MED19A0JLT2 244 aaPredicted RBP4.25□□□□□ -1.73
HDAC2-216ENST00000523628 C4orf47A7E2U8 309 aa4.25□□□□□ -1.73
HDAC2-216ENST00000523628 LINC00473A8K010 186 aa4.25□□□□□ -1.73
HDAC2-216ENST00000523628 PRAMEF26H0Y7S4 382 aa4.25□□□□□ -1.73
HDAC2-216ENST00000523628 M0R3H8 397 aa4.25□□□□□ -1.73
HDAC2-216ENST00000523628 AP4M1O00189 453 aa4.25□□□□□ -1.73
HDAC2-216ENST00000523628 CLDN5O00501 218 aa4.25□□□□□ -1.73
HDAC2-216ENST00000523628 CDX4O14627 284 aaPredicted RBP4.25□□□□□ -1.73
HDAC2-216ENST00000523628 WDR47O94967 919 aa4.25□□□□□ -1.73
HDAC2-216ENST00000523628 GP1BAP07359 652 aa4.25□□□□□ -1.73
HDAC2-216ENST00000523628 CISD3P0C7P0 127 aa4.25□□□□□ -1.73
HDAC2-216ENST00000523628 DHRS4L1P0CG22 281 aa4.25□□□□□ -1.73
HDAC2-216ENST00000523628 TRIM49P0CI25 452 aa4.25□□□□□ -1.73
HDAC2-216ENST00000523628 TRIM49CP0CI26 452 aa4.25□□□□□ -1.73
HDAC2-216ENST00000523628 IRF1P10914 325 aa4.25□□□□□ -1.73
HDAC2-216ENST00000523628 KRT10P13645 584 aa4.25□□□□□ -1.73
HDAC2-216ENST00000523628 ZFXP17010 805 aaPredicted RBP4.25□□□□□ -1.73
HDAC2-216ENST00000523628 GOT1P17174 413 aa4.25□□□□□ -1.73
HDAC2-216ENST00000523628 ITGB6P18564 788 aa4.25□□□□□ -1.73
HDAC2-216ENST00000523628 FPR3P25089 353 aa4.25□□□□□ -1.73
HDAC2-216ENST00000523628 LAMA1P25391 3075 aa4.25□□□□□ -1.73
HDAC2-216ENST00000523628 HOXD9P28356 352 aaPredicted RBP4.25□□□□□ -1.73
HDAC2-216ENST00000523628 PRKAR1BP31321 381 aa4.25□□□□□ -1.73
HDAC2-216ENST00000523628 PRCPP42785 496 aa4.25□□□□□ -1.73
HDAC2-216ENST00000523628 CASP4P49662 377 aa4.25□□□□□ -1.73
HDAC2-216ENST00000523628 BLKP51451 505 aa4.25□□□□□ -1.73
HDAC2-216ENST00000523628 TPMTP51580 245 aa4.25□□□□□ -1.73
HDAC2-216ENST00000523628 CACNA2D1P54289 1103 aa4.25□□□□□ -1.73
HDAC2-216ENST00000523628 PRKAA2P54646 552 aa4.25□□□□□ -1.73
HDAC2-216ENST00000523628 ECT2LQ008S8 904 aa4.25□□□□□ -1.73
HDAC2-216ENST00000523628 ZNF234Q14588 700 aa4.25□□□□□ -1.73
HDAC2-216ENST00000523628 SF3A2Q15428 464 aaKnown RBP4.25□□□□□ -1.73
HDAC2-216ENST00000523628 TRIP6Q15654 476 aaKnown RBP4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms