RNA–Protein interactions for RNA: ENST00000522117.5

SPIDR-217, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 2,745 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-217ENST00000522117 GMPPBQ9Y5P6 360 aa11.84□□□□□ -0.51
SPIDR-217ENST00000522117 OAS3Q9Y6K5 1087 aaKnown RBP11.84□□□□□ -0.51
SPIDR-217ENST00000522117 A0A1W2PP18 115 aa11.83□□□□□ -0.52
SPIDR-217ENST00000522117 OR6C65A6NJZ3 312 aa11.83□□□□□ -0.52
SPIDR-217ENST00000522117 BCKDKO14874 412 aa11.83□□□□□ -0.52
SPIDR-217ENST00000522117 RAC2P15153 192 aa11.83□□□□□ -0.52
SPIDR-217ENST00000522117 HOXA13P31271 388 aaPredicted RBP11.83□□□□□ -0.52
SPIDR-217ENST00000522117 BCAR1P56945 870 aa11.83□□□□□ -0.52
SPIDR-217ENST00000522117 HOXC5Q00444 222 aa11.83□□□□□ -0.52
SPIDR-217ENST00000522117 FOXM1Q08050 763 aa11.83□□□□□ -0.52
SPIDR-217ENST00000522117 IL18R1Q13478 541 aa11.83□□□□□ -0.52
SPIDR-217ENST00000522117 LTB4RQ15722 352 aa11.83□□□□□ -0.52
SPIDR-217ENST00000522117 LRFN4Q6PJG9 635 aa11.83□□□□□ -0.52
SPIDR-217ENST00000522117 DPP8Q6V1X1 898 aaPredicted RBP11.83□□□□□ -0.52
SPIDR-217ENST00000522117 MAP4K3Q8IVH8 894 aa11.83□□□□□ -0.52
SPIDR-217ENST00000522117 KCT2Q8NC54 265 aa11.83□□□□□ -0.52
SPIDR-217ENST00000522117 PCNPQ8WW12 178 aaKnown RBP11.83□□□□□ -0.52
SPIDR-217ENST00000522117 LPAR1Q92633 364 aa11.83□□□□□ -0.52
SPIDR-217ENST00000522117 C18orf25Q96B23 403 aaPredicted RBP11.83□□□□□ -0.52
SPIDR-217ENST00000522117 TEPSINQ96N21 525 aa11.83□□□□□ -0.52
SPIDR-217ENST00000522117 SIGLEC11Q96RL6 698 aa11.83□□□□□ -0.52
SPIDR-217ENST00000522117 OMDQ99983 421 aa11.83□□□□□ -0.52
SPIDR-217ENST00000522117 KATNAL1Q9BW62 490 aa11.83□□□□□ -0.52
SPIDR-217ENST00000522117 SLC22A4Q9H015 551 aa11.83□□□□□ -0.52
SPIDR-217ENST00000522117 SHARPINQ9H0F6 387 aa11.83□□□□□ -0.52
SPIDR-217ENST00000522117 ASAH2Q9NR71 780 aa11.83□□□□□ -0.52
SPIDR-217ENST00000522117 XPR1Q9UBH6 696 aa11.83□□□□□ -0.52
SPIDR-217ENST00000522117 MORF4L1Q9UBU8 362 aa11.83□□□□□ -0.52
SPIDR-217ENST00000522117 V9GYH0 126 aa11.83□□□□□ -0.52
SPIDR-217ENST00000522117 LTBP1Q14766 1721 aa11.83□□□□□ -0.52
SPIDR-217ENST00000522117 SLX4Q8IY92 1834 aa11.83□□□□□ -0.52
SPIDR-217ENST00000522117 LINC00587B1AMM8 73 aa11.83□□□□□ -0.52
SPIDR-217ENST00000522117 HUS1O60921 280 aa11.83□□□□□ -0.52
SPIDR-217ENST00000522117 PMPCBO75439 489 aa11.83□□□□□ -0.52
SPIDR-217ENST00000522117 RRASP10301 218 aa11.83□□□□□ -0.52
SPIDR-217ENST00000522117 RPS3P23396 243 aaKnown RBP eCLIP11.83□□□□□ -0.52
SPIDR-217ENST00000522117 HOXA1P49639 335 aaPredicted RBP11.83□□□□□ -0.52
SPIDR-217ENST00000522117 SNAP25P60880 206 aa11.83□□□□□ -0.52
SPIDR-217ENST00000522117 CLDN10P78369 228 aa11.83□□□□□ -0.52
SPIDR-217ENST00000522117 ASAH1Q13510 395 aa11.83□□□□□ -0.52
SPIDR-217ENST00000522117 SMN1Q16637 294 aaKnown RBP11.83□□□□□ -0.52
SPIDR-217ENST00000522117 ALFQ53S48 1182 aa11.83□□□□□ -0.52
SPIDR-217ENST00000522117 SH3PXD2AQ5TCZ1 1133 aa11.83□□□□□ -0.52
SPIDR-217ENST00000522117 ZC3HC1Q86WB0 502 aaKnown RBP11.83□□□□□ -0.52
SPIDR-217ENST00000522117 CCDC36Q8IYA8 594 aa11.83□□□□□ -0.52
SPIDR-217ENST00000522117 CENPLQ8N0S6 344 aaPredicted RBP11.83□□□□□ -0.52
SPIDR-217ENST00000522117 KBTBD8Q8NFY9 601 aa11.83□□□□□ -0.52
SPIDR-217ENST00000522117 DNAJB14Q8TBM8 379 aa11.83□□□□□ -0.52
SPIDR-217ENST00000522117 SMG7Q92540 1137 aaKnown RBP11.83□□□□□ -0.52
SPIDR-217ENST00000522117 COQ8BQ96D53 544 aa11.83□□□□□ -0.52
SPIDR-217ENST00000522117 AHCYL2Q96HN2 611 aaKnown RBP11.83□□□□□ -0.52
SPIDR-217ENST00000522117 FAM213AQ9BRX8 229 aa11.83□□□□□ -0.52
SPIDR-217ENST00000522117 ZNF416Q9BWM5 594 aa11.83□□□□□ -0.52
SPIDR-217ENST00000522117 PPIL3Q9H2H8 161 aaKnown RBP11.83□□□□□ -0.52
SPIDR-217ENST00000522117 SLC52A3Q9NQ40 469 aa11.83□□□□□ -0.52
SPIDR-217ENST00000522117 ING3Q9NXR8 418 aa11.83□□□□□ -0.52
SPIDR-217ENST00000522117 CYTH4Q9UIA0 394 aa11.83□□□□□ -0.52
SPIDR-217ENST00000522117 TNPO3Q9Y5L0 923 aaKnown RBP11.83□□□□□ -0.52
SPIDR-217ENST00000522117 STON1Q9Y6Q2 735 aa11.83□□□□□ -0.52
SPIDR-217ENST00000522117 F8W036 122 aa11.82□□□□□ -0.52
SPIDR-217ENST00000522117 APOL1O14791 398 aa11.82□□□□□ -0.52
SPIDR-217ENST00000522117 SYN3O14994 580 aa11.82□□□□□ -0.52
SPIDR-217ENST00000522117 TRIM3O75382 744 aaPredicted RBP11.82□□□□□ -0.52
SPIDR-217ENST00000522117 SUPT7LO94864 414 aa11.82□□□□□ -0.52
SPIDR-217ENST00000522117 CYP11A1P05108 521 aa11.82□□□□□ -0.52
SPIDR-217ENST00000522117 HEXBP07686 556 aa11.82□□□□□ -0.52
SPIDR-217ENST00000522117 RAB3AP20336 220 aa11.82□□□□□ -0.52
SPIDR-217ENST00000522117 F8A1P23610 371 aa11.82□□□□□ -0.52
SPIDR-217ENST00000522117 TIE1P35590 1138 aa11.82□□□□□ -0.52
SPIDR-217ENST00000522117 CLCNKAP51800 687 aa11.82□□□□□ -0.52
SPIDR-217ENST00000522117 ZNF79Q15937 498 aa11.82□□□□□ -0.52
SPIDR-217ENST00000522117 KIF19Q2TAC6 998 aa11.82□□□□□ -0.52
SPIDR-217ENST00000522117 BNIPLQ7Z465 357 aa11.82□□□□□ -0.52
SPIDR-217ENST00000522117 GPD1LQ8N335 351 aa11.82□□□□□ -0.52
SPIDR-217ENST00000522117 ZNF540Q8NDQ6 660 aa11.82□□□□□ -0.52
SPIDR-217ENST00000522117 PCDH19Q8TAB3 1148 aa11.82□□□□□ -0.52
SPIDR-217ENST00000522117 RBPMSQ93062 196 aaKnown RBP11.82□□□□□ -0.52
SPIDR-217ENST00000522117 CMTM3Q96MX0 182 aa11.82□□□□□ -0.52
SPIDR-217ENST00000522117 RBM4BQ9BQ04 359 aaKnown RBP11.82□□□□□ -0.52
SPIDR-217ENST00000522117 TBCDQ9BTW9 1192 aa11.82□□□□□ -0.52
SPIDR-217ENST00000522117 RBM4Q9BWF3 364 aaKnown RBP11.82□□□□□ -0.52
SPIDR-217ENST00000522117 TRIM54Q9BYV2 358 aa11.82□□□□□ -0.52
SPIDR-217ENST00000522117 ZNF518BQ9C0D4 1074 aa11.82□□□□□ -0.52
SPIDR-217ENST00000522117 HEXA-AS1Q9H8Q6 139 aa11.82□□□□□ -0.52
SPIDR-217ENST00000522117 CARS2Q9HA77 564 aaKnown RBP11.82□□□□□ -0.52
SPIDR-217ENST00000522117 BRD7Q9NPI1 651 aa11.82□□□□□ -0.52
SPIDR-217ENST00000522117 TMEFF2Q9UIK5 374 aaPredicted RBP11.82□□□□□ -0.52
SPIDR-217ENST00000522117 MRPL11Q9Y3B7 192 aaKnown RBP11.82□□□□□ -0.52
SPIDR-217ENST00000522117 POM121CA8CG34 1229 aa11.82□□□□□ -0.52
SPIDR-217ENST00000522117 PPP6CO00743 305 aa11.82□□□□□ -0.52
SPIDR-217ENST00000522117 HS6ST1O60243 411 aa11.82□□□□□ -0.52
SPIDR-217ENST00000522117 ATP6AP2O75787 350 aa11.82□□□□□ -0.52
SPIDR-217ENST00000522117 STAU1O95793 577 aaKnown RBP11.82□□□□□ -0.52
SPIDR-217ENST00000522117 RAP2AP10114 183 aa11.82□□□□□ -0.52
SPIDR-217ENST00000522117 APEHP13798 732 aaKnown RBP11.82□□□□□ -0.52
SPIDR-217ENST00000522117 OR4D2P58180 307 aa11.82□□□□□ -0.52
SPIDR-217ENST00000522117 RBP5P82980 135 aa11.82□□□□□ -0.52
SPIDR-217ENST00000522117 DAB2P98082 770 aa11.82□□□□□ -0.52
SPIDR-217ENST00000522117 GRK1Q15835 563 aa11.82□□□□□ -0.52
SPIDR-217ENST00000522117 SGCAQ16586 387 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms