RNA–Protein interactions for RNA: ENST00000521253.1

TRIM35-203, Transcript of tripartite motif containing 35, humanhuman

TSL 1 (best) BASIC

Gene TRIM35, Length 1,215 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-203ENST00000521253 DNAJC21Q5F1R6 531 aaKnown RBP20.06■□□□□ 0.8
TRIM35-203ENST00000521253 ZNF789Q5FWF6 425 aa20.06■□□□□ 0.8
TRIM35-203ENST00000521253 CEACAM20Q6UY09 585 aa20.06■□□□□ 0.8
TRIM35-203ENST00000521253 AMIGO1Q86WK6 493 aa20.06■□□□□ 0.8
TRIM35-203ENST00000521253 TBC1D21Q8IYX1 336 aa20.06■□□□□ 0.8
TRIM35-203ENST00000521253 OR5K2Q8NHB8 316 aa20.06■□□□□ 0.8
TRIM35-203ENST00000521253 SLC41A2Q96JW4 573 aa20.06■□□□□ 0.8
TRIM35-203ENST00000521253 TEFMQ96QE5 360 aaKnown RBP20.06■□□□□ 0.8
TRIM35-203ENST00000521253 PRORYQ9H606 182 aa20.06■□□□□ 0.8
TRIM35-203ENST00000521253 C20orf96Q9NUD7 363 aaPredicted RBP20.06■□□□□ 0.8
TRIM35-203ENST00000521253 WDR70Q9NW82 654 aa20.06■□□□□ 0.8
TRIM35-203ENST00000521253 RALYQ9UKM9 306 aaKnown RBP20.06■□□□□ 0.8
TRIM35-203ENST00000521253 CRYL1Q9Y2S2 319 aa20.06■□□□□ 0.8
TRIM35-203ENST00000521253 BTN3A1O00481 513 aa20.05■□□□□ 0.8
TRIM35-203ENST00000521253 POLR1CO15160 346 aaPredicted RBP20.05■□□□□ 0.8
TRIM35-203ENST00000521253 NIPSNAP2O75323 286 aa20.05■□□□□ 0.8
TRIM35-203ENST00000521253 SLCO2B1O94956 709 aa20.05■□□□□ 0.8
TRIM35-203ENST00000521253 S1PR4O95977 384 aa20.05■□□□□ 0.8
TRIM35-203ENST00000521253 ESR1P03372 595 aa20.05■□□□□ 0.8
TRIM35-203ENST00000521253 F7P08709 466 aaPredicted RBP20.05■□□□□ 0.8
TRIM35-203ENST00000521253 UCNP55089 124 aa20.05■□□□□ 0.8
TRIM35-203ENST00000521253 MRPS25P82663 173 aaKnown RBP20.05■□□□□ 0.8
TRIM35-203ENST00000521253 PRKAA1Q13131 559 aa20.05■□□□□ 0.8
TRIM35-203ENST00000521253 CTBP1Q13363 440 aa20.05■□□□□ 0.8
TRIM35-203ENST00000521253 BBS9Q3SYG4 887 aa20.05■□□□□ 0.8
TRIM35-203ENST00000521253 HIBCHQ6NVY1 386 aaPredicted RBP20.05■□□□□ 0.8
TRIM35-203ENST00000521253 OTOAQ7RTW8 1153 aa20.05■□□□□ 0.8
TRIM35-203ENST00000521253 DENND6AQ8IWF6 608 aa20.05■□□□□ 0.8
TRIM35-203ENST00000521253 UNC5BQ8IZJ1 945 aa20.05■□□□□ 0.8
TRIM35-203ENST00000521253 SERBP1Q8NC51 408 aaKnown RBP eCLIP20.05■□□□□ 0.8
TRIM35-203ENST00000521253 SPATA4Q8NEY3 305 aa20.05■□□□□ 0.8
TRIM35-203ENST00000521253 PPM1MQ96MI6 270 aa20.05■□□□□ 0.8
TRIM35-203ENST00000521253 PWWP2AQ96N64 755 aa20.05■□□□□ 0.8
TRIM35-203ENST00000521253 OR6C1Q96RD1 312 aa20.05■□□□□ 0.8
TRIM35-203ENST00000521253 EBNA1BP2Q99848 306 aaKnown RBP20.05■□□□□ 0.8
TRIM35-203ENST00000521253 ZPBPQ9BS86 351 aa20.05■□□□□ 0.8
TRIM35-203ENST00000521253 TRIM31Q9BZY9 425 aa20.05■□□□□ 0.8
TRIM35-203ENST00000521253 CPNE5Q9HCH3 593 aa20.05■□□□□ 0.8
TRIM35-203ENST00000521253 INTS10Q9NVR2 710 aaKnown RBP20.05■□□□□ 0.8
TRIM35-203ENST00000521253 POMT2Q9UKY4 750 aa20.05■□□□□ 0.8
TRIM35-203ENST00000521253 ICKQ9UPZ9 632 aa20.05■□□□□ 0.8
TRIM35-203ENST00000521253 VPS9D1Q9Y2B5 631 aa20.05■□□□□ 0.8
TRIM35-203ENST00000521253 TDRKHQ9Y2W6 561 aaKnown RBP20.05■□□□□ 0.8
TRIM35-203ENST00000521253 FAM169AQ9Y6X4 670 aa20.05■□□□□ 0.8
TRIM35-203ENST00000521253 GSAPA4D1B5 854 aa20.04■□□□□ 0.8
TRIM35-203ENST00000521253 H3BMM5 538 aa20.04■□□□□ 0.8
TRIM35-203ENST00000521253 SEC31AO94979 1220 aaKnown RBP20.04■□□□□ 0.8
TRIM35-203ENST00000521253 TPBGLP0DKB5 382 aa20.04■□□□□ 0.8
TRIM35-203ENST00000521253 SLC1A2P43004 574 aa20.04■□□□□ 0.8
TRIM35-203ENST00000521253 ITGA8P53708 1063 aa20.04■□□□□ 0.8
TRIM35-203ENST00000521253 TMPRSS3P57727 454 aa20.04■□□□□ 0.8
TRIM35-203ENST00000521253 CXADRP78310 365 aa20.04■□□□□ 0.8
TRIM35-203ENST00000521253 ABRQ12979 859 aa20.04■□□□□ 0.8
TRIM35-203ENST00000521253 SRSF6Q13247 344 aaKnown RBP20.04■□□□□ 0.8
TRIM35-203ENST00000521253 CRYMQ14894 314 aa20.04■□□□□ 0.8
TRIM35-203ENST00000521253 FBXO38Q6PIJ6 1188 aa20.04■□□□□ 0.8
TRIM35-203ENST00000521253 IGDCC3Q8IVU1 814 aa20.04■□□□□ 0.8
TRIM35-203ENST00000521253 ADGRF3Q8IZF5 1079 aa20.04■□□□□ 0.8
TRIM35-203ENST00000521253 FAM136AQ96C01 138 aa20.04■□□□□ 0.8
TRIM35-203ENST00000521253 SNF8Q96H20 258 aa20.04■□□□□ 0.8
TRIM35-203ENST00000521253 FBXO6Q9NRD1 293 aaPredicted RBP20.04■□□□□ 0.8
TRIM35-203ENST00000521253 POLG2Q9UHN1 485 aa20.04■□□□□ 0.8
TRIM35-203ENST00000521253 PCDHB11Q9Y5F2 797 aa20.04■□□□□ 0.8
TRIM35-203ENST00000521253 EFCAB8A8MWE9 144 aa20.03■□□□□ 0.8
TRIM35-203ENST00000521253 SMAPO00193 183 aa20.03■□□□□ 0.8
TRIM35-203ENST00000521253 MATN2O00339 956 aa20.03■□□□□ 0.8
TRIM35-203ENST00000521253 KPNA5O15131 536 aa20.03■□□□□ 0.8
TRIM35-203ENST00000521253 TP73O15350 636 aa20.03■□□□□ 0.8
TRIM35-203ENST00000521253 PKMP14618 531 aaKnown RBP20.03■□□□□ 0.8
TRIM35-203ENST00000521253 KCNAB1Q14722 419 aa20.03■□□□□ 0.8
TRIM35-203ENST00000521253 HSP90AA5PQ58FG0 334 aa20.03■□□□□ 0.8
TRIM35-203ENST00000521253 PLEKHS1Q5SXH7 462 aa20.03■□□□□ 0.8
TRIM35-203ENST00000521253 KMT5CQ86Y97 462 aa20.03■□□□□ 0.8
TRIM35-203ENST00000521253 LMNTD2Q8IXW0 634 aa20.03■□□□□ 0.8
TRIM35-203ENST00000521253 PDIK1LQ8N165 341 aa20.03■□□□□ 0.8
TRIM35-203ENST00000521253 CFAP61Q8NHU2 1237 aa20.03■□□□□ 0.8
TRIM35-203ENST00000521253 CCNL2Q96S94 520 aaPredicted RBP20.03■□□□□ 0.8
TRIM35-203ENST00000521253 SPRY4Q9C004 299 aa20.03■□□□□ 0.8
TRIM35-203ENST00000521253 PLAGL1Q9UM63 463 aa20.03■□□□□ 0.8
TRIM35-203ENST00000521253 IGSF10Q6WRI0 2623 aa20.02■□□□□ 0.8
TRIM35-203ENST00000521253 TTC4O95801 387 aa20.02■□□□□ 0.8
TRIM35-203ENST00000521253 FOLR1P15328 257 aa20.02■□□□□ 0.8
TRIM35-203ENST00000521253 CHRM3P20309 590 aa20.02■□□□□ 0.8
TRIM35-203ENST00000521253 PRDX3P30048 256 aaKnown RBP20.02■□□□□ 0.8
TRIM35-203ENST00000521253 SHMT2P34897 504 aa20.02■□□□□ 0.8
TRIM35-203ENST00000521253 RPL21P46778 160 aaKnown RBP20.02■□□□□ 0.8
TRIM35-203ENST00000521253 ARL4DP49703 201 aa20.02■□□□□ 0.8
TRIM35-203ENST00000521253 HSD11B2P80365 405 aa20.02■□□□□ 0.8
TRIM35-203ENST00000521253 C2orf54Q08AI8 447 aa20.02■□□□□ 0.8
TRIM35-203ENST00000521253 IL11RAQ14626 422 aa20.02■□□□□ 0.8
TRIM35-203ENST00000521253 HP1BP3Q5SSJ5 553 aaPredicted RBP20.02■□□□□ 0.8
TRIM35-203ENST00000521253 UNC5DQ6UXZ4 953 aa20.02■□□□□ 0.8
TRIM35-203ENST00000521253 UNC5AQ6ZN44 842 aa20.02■□□□□ 0.8
TRIM35-203ENST00000521253 VASH2Q86V25 355 aa20.02■□□□□ 0.8
TRIM35-203ENST00000521253 KCNMB4Q86W47 210 aa20.02■□□□□ 0.8
TRIM35-203ENST00000521253 CARFQ8N187 725 aa20.02■□□□□ 0.8
TRIM35-203ENST00000521253 SIDT2Q8NBJ9 832 aaKnown RBP20.02■□□□□ 0.8
TRIM35-203ENST00000521253 GSDMBQ8TAX9 411 aa20.02■□□□□ 0.8
TRIM35-203ENST00000521253 CALML6Q8TD86 181 aa20.02■□□□□ 0.8
TRIM35-203ENST00000521253 NKD1Q969G9 470 aa20.02■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms