RNA–Protein interactions for RNA: ENST00000521216.5

SKP1-208, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SKP1, Length 899 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-208ENST00000521216 SLC4A11Q8NBS3 891 aa4.76□□□□□ -1.65
SKP1-208ENST00000521216 OR10V1Q8NGI7 309 aa4.76□□□□□ -1.65
SKP1-208ENST00000521216 FCAMRQ8WWV6 532 aa4.76□□□□□ -1.65
SKP1-208ENST00000521216 SLAMF9Q96A28 289 aa4.76□□□□□ -1.65
SKP1-208ENST00000521216 SGK494Q96LW2 274 aa4.76□□□□□ -1.65
SKP1-208ENST00000521216 VN1R1Q9GZP7 353 aa4.76□□□□□ -1.65
SKP1-208ENST00000521216 WNT5BQ9H1J7 359 aa4.76□□□□□ -1.65
SKP1-208ENST00000521216 S1PR5Q9H228 398 aa4.76□□□□□ -1.65
SKP1-208ENST00000521216 SMCHD1A6NHR9 2005 aa4.75□□□□□ -1.65
SKP1-208ENST00000521216 EDDM13A0A1B0GTR0 161 aa4.75□□□□□ -1.65
SKP1-208ENST00000521216 TCRBV21S2A2A0A5A6 115 aa4.75□□□□□ -1.65
SKP1-208ENST00000521216 PMS2P5A8MQ11 134 aa4.75□□□□□ -1.65
SKP1-208ENST00000521216 PRR32B1ATL7 298 aa4.75□□□□□ -1.65
SKP1-208ENST00000521216 SMIM1B2RUZ4 78 aa4.75□□□□□ -1.65
SKP1-208ENST00000521216 FAM72CH0Y354 149 aa4.75□□□□□ -1.65
SKP1-208ENST00000521216 GAPDHSO14556 408 aaPredicted RBP4.75□□□□□ -1.65
SKP1-208ENST00000521216 LINC01565O15544 149 aa4.75□□□□□ -1.65
SKP1-208ENST00000521216 PLOD3O60568 738 aa4.75□□□□□ -1.65
SKP1-208ENST00000521216 TOMM70O94826 608 aa4.75□□□□□ -1.65
SKP1-208ENST00000521216 LINGO3P0C6S8 592 aa4.75□□□□□ -1.65
SKP1-208ENST00000521216 MC5RP33032 325 aa4.75□□□□□ -1.65
SKP1-208ENST00000521216 RALGDSQ12967 914 aa4.75□□□□□ -1.65
SKP1-208ENST00000521216 FAM72AQ5TYM5 149 aa4.75□□□□□ -1.65
SKP1-208ENST00000521216 FAM72DQ6L9T8 149 aa4.75□□□□□ -1.65
SKP1-208ENST00000521216 RBMS3Q6XE24 437 aaKnown RBP4.75□□□□□ -1.65
SKP1-208ENST00000521216 TRPT1Q86TN4 253 aaKnown RBP4.75□□□□□ -1.65
SKP1-208ENST00000521216 ZNF329Q86UD4 541 aa4.75□□□□□ -1.65
SKP1-208ENST00000521216 IQCHQ86VS3 1027 aa4.75□□□□□ -1.65
SKP1-208ENST00000521216 FAM72BQ86X60 149 aa4.75□□□□□ -1.65
SKP1-208ENST00000521216 TTC30BQ8N4P2 665 aa4.75□□□□□ -1.65
SKP1-208ENST00000521216 CCDC191Q8NCU4 936 aa4.75□□□□□ -1.65
SKP1-208ENST00000521216 OR1J1Q8NGS3 322 aa4.75□□□□□ -1.65
SKP1-208ENST00000521216 OR13J1Q8NGT2 312 aa4.75□□□□□ -1.65
SKP1-208ENST00000521216 GRAPLQ8TC17 118 aaPredicted RBP4.75□□□□□ -1.65
SKP1-208ENST00000521216 ERP27Q96DN0 273 aa4.75□□□□□ -1.65
SKP1-208ENST00000521216 SLC47A1Q96FL8 570 aa4.75□□□□□ -1.65
SKP1-208ENST00000521216 PGAP3Q96FM1 320 aaPredicted RBP4.75□□□□□ -1.65
SKP1-208ENST00000521216 SEPHS2Q99611 448 aa4.75□□□□□ -1.65
SKP1-208ENST00000521216 BTBD10Q9BSF8 475 aa4.75□□□□□ -1.65
SKP1-208ENST00000521216 NOL11Q9H8H0 719 aaKnown RBP4.75□□□□□ -1.65
SKP1-208ENST00000521216 CNOT10Q9H9A5 744 aaKnown RBP4.75□□□□□ -1.65
SKP1-208ENST00000521216 TXLNGQ9NUQ3 528 aa4.75□□□□□ -1.65
SKP1-208ENST00000521216 COQ3Q9NZJ6 369 aa4.75□□□□□ -1.65
SKP1-208ENST00000521216 B3GAT1Q9P2W7 334 aa4.75□□□□□ -1.65
SKP1-208ENST00000521216 OSGIN1Q9UJX0 560 aa4.75□□□□□ -1.65
SKP1-208ENST00000521216 ACAD8Q9UKU7 415 aa4.75□□□□□ -1.65
SKP1-208ENST00000521216 PADI2Q9Y2J8 665 aa4.75□□□□□ -1.65
SKP1-208ENST00000521216 TCF20Q9UGU0 1960 aaKnown RBP4.74□□□□□ -1.65
SKP1-208ENST00000521216 A0A0G2JLW4 131 aa4.74□□□□□ -1.65
SKP1-208ENST00000521216 ERVV-2B6SEH9 535 aa4.74□□□□□ -1.65
SKP1-208ENST00000521216 DNM1LO00429 736 aa4.74□□□□□ -1.65
SKP1-208ENST00000521216 TSHBP01222 138 aa4.74□□□□□ -1.65
SKP1-208ENST00000521216 SP1P08047 785 aa4.74□□□□□ -1.65
SKP1-208ENST00000521216 IGHV4-38-2P0DP08 117 aa4.74□□□□□ -1.65
SKP1-208ENST00000521216 MYBL1P10243 752 aa4.74□□□□□ -1.65
SKP1-208ENST00000521216 CPT2P23786 658 aa4.74□□□□□ -1.65
SKP1-208ENST00000521216 PTPN3P26045 913 aa4.74□□□□□ -1.65
SKP1-208ENST00000521216 MTHFRP42898 656 aa4.74□□□□□ -1.65
SKP1-208ENST00000521216 PDX1P52945 283 aa4.74□□□□□ -1.65
SKP1-208ENST00000521216 CSE1LP55060 971 aaKnown RBP4.74□□□□□ -1.65
SKP1-208ENST00000521216 ZC2HC1CQ53FD0 456 aaPredicted RBP4.74□□□□□ -1.65
SKP1-208ENST00000521216 PHLDA2Q53GA4 152 aa4.74□□□□□ -1.65
SKP1-208ENST00000521216 DCAF10Q5QP82 559 aa4.74□□□□□ -1.65
SKP1-208ENST00000521216 KRT74Q7RTS7 529 aa4.74□□□□□ -1.65
SKP1-208ENST00000521216 CNBD1Q8NA66 436 aa4.74□□□□□ -1.65
SKP1-208ENST00000521216 OR6J1Q8NGC5 347 aa4.74□□□□□ -1.65
SKP1-208ENST00000521216 SYN2Q92777 582 aaPredicted RBP4.74□□□□□ -1.65
SKP1-208ENST00000521216 FBXO17Q96EF6 278 aa4.74□□□□□ -1.65
SKP1-208ENST00000521216 PGLYRP2Q96PD5 576 aa4.74□□□□□ -1.65
SKP1-208ENST00000521216 GPR88Q9GZN0 384 aa4.74□□□□□ -1.65
SKP1-208ENST00000521216 A4GALTQ9NPC4 353 aa4.74□□□□□ -1.65
SKP1-208ENST00000521216 WDR35Q9P2L0 1181 aa4.74□□□□□ -1.65
SKP1-208ENST00000521216 TCF19Q9Y242 345 aa4.74□□□□□ -1.65
SKP1-208ENST00000521216 PRR23AA6NEV1 266 aa4.73□□□□□ -1.65
SKP1-208ENST00000521216 URADA6NGE7 173 aa4.73□□□□□ -1.65
SKP1-208ENST00000521216 SPRY1O43609 319 aaPredicted RBP4.73□□□□□ -1.65
SKP1-208ENST00000521216 TIMM44O43615 452 aa4.73□□□□□ -1.65
SKP1-208ENST00000521216 OR10H2O60403 315 aa4.73□□□□□ -1.65
SKP1-208ENST00000521216 GGPS1O95749 300 aa4.73□□□□□ -1.65
SKP1-208ENST00000521216 INHBAP08476 426 aa4.73□□□□□ -1.65
SKP1-208ENST00000521216 PCGF2P35227 344 aa4.73□□□□□ -1.65
SKP1-208ENST00000521216 TIMP3P35625 211 aa4.73□□□□□ -1.65
SKP1-208ENST00000521216 PPP5CP53041 499 aa4.73□□□□□ -1.65
SKP1-208ENST00000521216 HNRNPKP61978 463 aaKnown RBP eCLIP4.73□□□□□ -1.65
SKP1-208ENST00000521216 LGALS3BPQ08380 585 aa4.73□□□□□ -1.65
SKP1-208ENST00000521216 KRT39Q6A163 491 aa4.73□□□□□ -1.65
SKP1-208ENST00000521216 RPUSD3Q6P087 351 aaKnown RBP4.73□□□□□ -1.65
SKP1-208ENST00000521216 Q6ZTC4 211 aa4.73□□□□□ -1.65
SKP1-208ENST00000521216 ISCA2Q86U28 154 aa4.73□□□□□ -1.65
SKP1-208ENST00000521216 CDK20Q8IZL9 346 aa4.73□□□□□ -1.65
SKP1-208ENST00000521216 TRIML1Q8N9V2 468 aa4.73□□□□□ -1.65
SKP1-208ENST00000521216 ZNF383Q8NA42 475 aa4.73□□□□□ -1.65
SKP1-208ENST00000521216 FGFBP3Q8TAT2 258 aa4.73□□□□□ -1.65
SKP1-208ENST00000521216 IRGQQ8WZA9 623 aa4.73□□□□□ -1.65
SKP1-208ENST00000521216 ZNF524Q96C55 264 aa4.73□□□□□ -1.65
SKP1-208ENST00000521216 CNDP2Q96KP4 475 aaKnown RBP4.73□□□□□ -1.65
SKP1-208ENST00000521216 LINC00615Q96LM1 132 aaPredicted RBP4.73□□□□□ -1.65
SKP1-208ENST00000521216 ANKZF1Q9H8Y5 726 aa4.73□□□□□ -1.65
SKP1-208ENST00000521216 PIH1D3Q9NQM4 214 aaKnown RBP4.73□□□□□ -1.65
SKP1-208ENST00000521216 PRMT7Q9NVM4 692 aaPredicted RBP4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms