RNA–Protein interactions for RNA: ENST00000519623.1

CSMD1-205, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 4

Gene CSMD1, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-205ENST00000519623 SYCE1Q8N0S2 351 aa12.06□□□□□ -0.48
CSMD1-205ENST00000519623 TAB3Q8N5C8 712 aaPredicted RBP12.06□□□□□ -0.48
CSMD1-205ENST00000519623 TEX19Q8NA77 164 aa12.06□□□□□ -0.48
CSMD1-205ENST00000519623 CLEC18CQ8NCF0 446 aa12.06□□□□□ -0.48
CSMD1-205ENST00000519623 ADAMTS17Q8TE56 1095 aa12.06□□□□□ -0.48
CSMD1-205ENST00000519623 CPT1BQ92523 772 aa12.06□□□□□ -0.48
CSMD1-205ENST00000519623 COL26A1Q96A83 441 aa12.06□□□□□ -0.48
CSMD1-205ENST00000519623 DESI2Q9BSY9 194 aa12.06□□□□□ -0.48
CSMD1-205ENST00000519623 NLNQ9BYT8 704 aa12.06□□□□□ -0.48
CSMD1-205ENST00000519623 SYTL2Q9HCH5 934 aa12.06□□□□□ -0.48
CSMD1-205ENST00000519623 MLXIPLQ9NP71 852 aa12.06□□□□□ -0.48
CSMD1-205ENST00000519623 SMARCAL1Q9NZC9 954 aa12.06□□□□□ -0.48
CSMD1-205ENST00000519623 PLAAQ9Y263 795 aa12.06□□□□□ -0.48
CSMD1-205ENST00000519623 CCDC88CQ9P219 2028 aa12.05□□□□□ -0.48
CSMD1-205ENST00000519623 CCDC78A2IDD5 438 aa12.05□□□□□ -0.48
CSMD1-205ENST00000519623 CCDC162PA2VCL2 907 aa12.05□□□□□ -0.48
CSMD1-205ENST00000519623 OR51F1A6NGY5 319 aa12.05□□□□□ -0.48
CSMD1-205ENST00000519623 C2orf74A8MZ97 194 aa12.05□□□□□ -0.48
CSMD1-205ENST00000519623 TMEM150CB9EJG8 249 aa12.05□□□□□ -0.48
CSMD1-205ENST00000519623 BHMG1C9JSJ3 638 aaPredicted RBP12.05□□□□□ -0.48
CSMD1-205ENST00000519623 LIN7AO14910 233 aaPredicted RBP12.05□□□□□ -0.48
CSMD1-205ENST00000519623 PTMAP06454 111 aaKnown RBP12.05□□□□□ -0.48
CSMD1-205ENST00000519623 PVRP15151 417 aa12.05□□□□□ -0.48
CSMD1-205ENST00000519623 MSNP26038 577 aaKnown RBP12.05□□□□□ -0.48
CSMD1-205ENST00000519623 STIP1P31948 543 aaKnown RBP12.05□□□□□ -0.48
CSMD1-205ENST00000519623 FOXN2P32314 431 aa12.05□□□□□ -0.48
CSMD1-205ENST00000519623 NSG1P42857 185 aa12.05□□□□□ -0.48
CSMD1-205ENST00000519623 LMAN1P49257 510 aa12.05□□□□□ -0.48
CSMD1-205ENST00000519623 SRSF1Q07955 248 aaKnown RBP eCLIP12.05□□□□□ -0.48
CSMD1-205ENST00000519623 UBAP2LQ14157 1087 aaKnown RBP12.05□□□□□ -0.48
CSMD1-205ENST00000519623 ITIH4Q14624 930 aa12.05□□□□□ -0.48
CSMD1-205ENST00000519623 CCDC38Q502W7 563 aa12.05□□□□□ -0.48
CSMD1-205ENST00000519623 FAM69BQ5VUD6 431 aa12.05□□□□□ -0.48
CSMD1-205ENST00000519623 CPZQ66K79 652 aa12.05□□□□□ -0.48
CSMD1-205ENST00000519623 PACS1Q6VY07 963 aa12.05□□□□□ -0.48
CSMD1-205ENST00000519623 UNC5AQ6ZN44 842 aa12.05□□□□□ -0.48
CSMD1-205ENST00000519623 CDHR3Q6ZTQ4 885 aa12.05□□□□□ -0.48
CSMD1-205ENST00000519623 LINC00523Q86TU6 105 aa12.05□□□□□ -0.48
CSMD1-205ENST00000519623 OR52K1Q8NGK4 314 aa12.05□□□□□ -0.48
CSMD1-205ENST00000519623 OR13J1Q8NGT2 312 aa12.05□□□□□ -0.48
CSMD1-205ENST00000519623 ATG4AQ8WYN0 398 aa12.05□□□□□ -0.48
CSMD1-205ENST00000519623 MIB2Q96AX9 1013 aa12.05□□□□□ -0.48
CSMD1-205ENST00000519623 KLHL25Q9H0H3 589 aa12.05□□□□□ -0.48
CSMD1-205ENST00000519623 FANCEQ9HB96 536 aa12.05□□□□□ -0.48
CSMD1-205ENST00000519623 ETNK1Q9HBU6 452 aa12.05□□□□□ -0.48
CSMD1-205ENST00000519623 PCMTD2Q9NV79 361 aa12.05□□□□□ -0.48
CSMD1-205ENST00000519623 ACTR10Q9NZ32 417 aa12.05□□□□□ -0.48
CSMD1-205ENST00000519623 SERTAD3Q9UJW9 196 aa12.05□□□□□ -0.48
CSMD1-205ENST00000519623 ICKQ9UPZ9 632 aa12.05□□□□□ -0.48
CSMD1-205ENST00000519623 USP9XQ93008 2570 aaPredicted RBP12.05□□□□□ -0.48
CSMD1-205ENST00000519623 FER1L5A0AVI2 2057 aa12.04□□□□□ -0.48
CSMD1-205ENST00000519623 SNRNP200O75643 2136 aaKnown RBP12.04□□□□□ -0.48
CSMD1-205ENST00000519623 SLC5A10A0PJK1 596 aa12.04□□□□□ -0.48
CSMD1-205ENST00000519623 H3BMH7 237 aa12.04□□□□□ -0.48
CSMD1-205ENST00000519623 SUN1O94901 812 aa12.04□□□□□ -0.48
CSMD1-205ENST00000519623 GRIA1P42261 906 aa12.04□□□□□ -0.48
CSMD1-205ENST00000519623 CD97P48960 835 aa12.04□□□□□ -0.48
CSMD1-205ENST00000519623 CCL11P51671 97 aa12.04□□□□□ -0.48
CSMD1-205ENST00000519623 MLLT10P55197 1068 aa12.04□□□□□ -0.48
CSMD1-205ENST00000519623 CHAF1BQ13112 559 aa12.04□□□□□ -0.48
CSMD1-205ENST00000519623 BRD3Q15059 726 aa12.04□□□□□ -0.48
CSMD1-205ENST00000519623 OASLQ15646 514 aaKnown RBP12.04□□□□□ -0.48
CSMD1-205ENST00000519623 ZIC1Q15915 447 aa12.04□□□□□ -0.48
CSMD1-205ENST00000519623 PAPD7Q5XG87 772 aaKnown RBP12.04□□□□□ -0.48
CSMD1-205ENST00000519623 ZNF385CQ66K41 422 aaPredicted RBP12.04□□□□□ -0.48
CSMD1-205ENST00000519623 SPESP1Q6UW49 350 aa12.04□□□□□ -0.48
CSMD1-205ENST00000519623 NAPRTQ6XQN6 538 aa12.04□□□□□ -0.48
CSMD1-205ENST00000519623 ENDOVQ8N8Q3 282 aaKnown RBP12.04□□□□□ -0.48
CSMD1-205ENST00000519623 OR5AR1Q8NGP9 310 aa12.04□□□□□ -0.48
CSMD1-205ENST00000519623 FLVCR1-AS1Q8TAF5 88 aa12.04□□□□□ -0.48
CSMD1-205ENST00000519623 HDAC10Q969S8 669 aa12.04□□□□□ -0.48
CSMD1-205ENST00000519623 CLIP3Q96DZ5 547 aa12.04□□□□□ -0.48
CSMD1-205ENST00000519623 ALS2CR12Q96Q35 445 aa12.04□□□□□ -0.48
CSMD1-205ENST00000519623 OR2A14Q96R47 310 aa12.04□□□□□ -0.48
CSMD1-205ENST00000519623 HGH1Q9BTY7 390 aa12.04□□□□□ -0.48
CSMD1-205ENST00000519623 ING2Q9H160 280 aa12.04□□□□□ -0.48
CSMD1-205ENST00000519623 ACTR5Q9H9F9 607 aaPredicted RBP12.04□□□□□ -0.48
CSMD1-205ENST00000519623 FAM60AQ9NP50 221 aa12.04□□□□□ -0.48
CSMD1-205ENST00000519623 SLC2A6Q9UGQ3 507 aa12.04□□□□□ -0.48
CSMD1-205ENST00000519623 TCFL5Q9UL49 500 aa12.04□□□□□ -0.48
CSMD1-205ENST00000519623 PCDHGA9Q9Y5G4 932 aaKnown RBP12.04□□□□□ -0.48
CSMD1-205ENST00000519623 CAPN6Q9Y6Q1 641 aa12.04□□□□□ -0.48
CSMD1-205ENST00000519623 USP9YO00507 2555 aaPredicted RBP12.04□□□□□ -0.48
CSMD1-205ENST00000519623 ARGFXA6NJG6 315 aa12.03□□□□□ -0.48
CSMD1-205ENST00000519623 ERI2A8K979 691 aaKnown RBP12.03□□□□□ -0.48
CSMD1-205ENST00000519623 QSOX1O00391 747 aa12.03□□□□□ -0.48
CSMD1-205ENST00000519623 MAP3K7O43318 606 aa12.03□□□□□ -0.48
CSMD1-205ENST00000519623 ZNF749O43361 778 aa12.03□□□□□ -0.48
CSMD1-205ENST00000519623 HCRTR1O43613 425 aa12.03□□□□□ -0.48
CSMD1-205ENST00000519623 LIASO43766 372 aa12.03□□□□□ -0.48
CSMD1-205ENST00000519623 OR1I1O60431 355 aa12.03□□□□□ -0.48
CSMD1-205ENST00000519623 CEACAM4O75871 244 aa12.03□□□□□ -0.48
CSMD1-205ENST00000519623 FTH1P02794 183 aa12.03□□□□□ -0.48
CSMD1-205ENST00000519623 UGT2B7P16662 529 aa12.03□□□□□ -0.48
CSMD1-205ENST00000519623 CYP2A7P20853 494 aa12.03□□□□□ -0.48
CSMD1-205ENST00000519623 PTGIRP43119 386 aa12.03□□□□□ -0.48
CSMD1-205ENST00000519623 GABRA4P48169 554 aa12.03□□□□□ -0.48
CSMD1-205ENST00000519623 ITGA1P56199 1179 aa12.03□□□□□ -0.48
CSMD1-205ENST00000519623 ACVR1Q04771 509 aa12.03□□□□□ -0.48
CSMD1-205ENST00000519623 CDH17Q12864 832 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms