RNA–Protein interactions for RNA: ENST00000519481.5

PVT1-208, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 542 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-208ENST00000519481 DDX3YO15523 660 aaKnown RBP10.54□□□□□ -0.72
PVT1-208ENST00000519481 DPM1O60762 260 aa10.54□□□□□ -0.72
PVT1-208ENST00000519481 TMEM63AO94886 807 aa10.54□□□□□ -0.72
PVT1-208ENST00000519481 ST6GAL1P15907 406 aa10.54□□□□□ -0.72
PVT1-208ENST00000519481 TPH1P17752 444 aa10.54□□□□□ -0.72
PVT1-208ENST00000519481 PDHA2P29803 388 aa10.54□□□□□ -0.72
PVT1-208ENST00000519481 SHMT2P34897 504 aa10.54□□□□□ -0.72
PVT1-208ENST00000519481 NSG1P42857 185 aa10.54□□□□□ -0.72
PVT1-208ENST00000519481 PTGIRP43119 386 aa10.54□□□□□ -0.72
PVT1-208ENST00000519481 VAV2P52735 878 aa10.54□□□□□ -0.72
PVT1-208ENST00000519481 SRSF1Q07955 248 aaKnown RBP eCLIP10.54□□□□□ -0.72
PVT1-208ENST00000519481 ABRQ12979 859 aa10.54□□□□□ -0.72
PVT1-208ENST00000519481 MSLNQ13421 630 aaPredicted RBP10.54□□□□□ -0.72
PVT1-208ENST00000519481 IL10RAQ13651 578 aa10.54□□□□□ -0.72
PVT1-208ENST00000519481 LAMB3Q13751 1172 aa10.54□□□□□ -0.72
PVT1-208ENST00000519481 BOP1Q14137 746 aaKnown RBP10.54□□□□□ -0.72
PVT1-208ENST00000519481 ITIH4Q14624 930 aa10.54□□□□□ -0.72
PVT1-208ENST00000519481 POU6F1Q14863 301 aa10.54□□□□□ -0.72
PVT1-208ENST00000519481 SYTL3Q4VX76 610 aa10.54□□□□□ -0.72
PVT1-208ENST00000519481 PRAMEF17Q5VTA0 474 aa10.54□□□□□ -0.72
PVT1-208ENST00000519481 CPZQ66K79 652 aa10.54□□□□□ -0.72
PVT1-208ENST00000519481 RAB43Q86YS6 212 aa10.54□□□□□ -0.72
PVT1-208ENST00000519481 HPS6Q86YV9 775 aa10.54□□□□□ -0.72
PVT1-208ENST00000519481 KLHDC8BQ8IXV7 354 aa10.54□□□□□ -0.72
PVT1-208ENST00000519481 SYTL1Q8IYJ3 562 aa10.54□□□□□ -0.72
PVT1-208ENST00000519481 CLDN19Q8N6F1 224 aa10.54□□□□□ -0.72
PVT1-208ENST00000519481 TMEM102Q8N9M5 508 aaPredicted RBP10.54□□□□□ -0.72
PVT1-208ENST00000519481 FAM71DQ8N9W8 422 aa10.54□□□□□ -0.72
PVT1-208ENST00000519481 SLC38A9Q8NBW4 561 aa10.54□□□□□ -0.72
PVT1-208ENST00000519481 OR1L3Q8NH93 324 aa10.54□□□□□ -0.72
PVT1-208ENST00000519481 CPT1CQ8TCG5 803 aa10.54□□□□□ -0.72
PVT1-208ENST00000519481 ALG3Q92685 438 aa10.54□□□□□ -0.72
PVT1-208ENST00000519481 CDKN2AIPNLQ96HQ2 116 aa10.54□□□□□ -0.72
PVT1-208ENST00000519481 TRAPPC9Q96Q05 1148 aa10.54□□□□□ -0.72
PVT1-208ENST00000519481 PITPNM3Q9BZ71 974 aa10.54□□□□□ -0.72
PVT1-208ENST00000519481 PCMTD2Q9NV79 361 aa10.54□□□□□ -0.72
PVT1-208ENST00000519481 POLG2Q9UHN1 485 aa10.54□□□□□ -0.72
PVT1-208ENST00000519481 GPN3Q9UHW5 284 aaPredicted RBP10.54□□□□□ -0.72
PVT1-208ENST00000519481 ASF1AQ9Y294 204 aa10.54□□□□□ -0.72
PVT1-208ENST00000519481 AP1M2Q9Y6Q5 423 aa10.54□□□□□ -0.72
PVT1-208ENST00000519481 DUSP10Q9Y6W6 482 aa10.54□□□□□ -0.72
PVT1-208ENST00000519481 GRID2IPA4D2P6 1211 aa10.53□□□□□ -0.72
PVT1-208ENST00000519481 CYSRT1A8MQ03 144 aa10.53□□□□□ -0.72
PVT1-208ENST00000519481 ZNF749O43361 778 aa10.53□□□□□ -0.72
PVT1-208ENST00000519481 AP2A1O95782 977 aa10.53□□□□□ -0.72
PVT1-208ENST00000519481 CD63P08962 238 aa10.53□□□□□ -0.72
PVT1-208ENST00000519481 OR56A5P0C7T3 313 aa10.53□□□□□ -0.72
PVT1-208ENST00000519481 GP1BBP13224 206 aa10.53□□□□□ -0.72
PVT1-208ENST00000519481 MSNP26038 577 aaKnown RBP10.53□□□□□ -0.72
PVT1-208ENST00000519481 VARSP26640 1264 aaKnown RBP10.53□□□□□ -0.72
PVT1-208ENST00000519481 RORAP35398 523 aa10.53□□□□□ -0.72
PVT1-208ENST00000519481 PPARGP37231 505 aaPredicted RBP10.53□□□□□ -0.72
PVT1-208ENST00000519481 CDKN1CP49918 316 aaPredicted RBP10.53□□□□□ -0.72
PVT1-208ENST00000519481 ZNF75DP51815 510 aa10.53□□□□□ -0.72
PVT1-208ENST00000519481 KIF5AQ12840 1032 aa10.53□□□□□ -0.72
PVT1-208ENST00000519481 DBN1Q16643 649 aa10.53□□□□□ -0.72
PVT1-208ENST00000519481 PTCHD3Q3KNS1 767 aa10.53□□□□□ -0.72
PVT1-208ENST00000519481 LYPLAL1Q5VWZ2 237 aa10.53□□□□□ -0.72
PVT1-208ENST00000519481 KCTD11Q693B1 232 aa10.53□□□□□ -0.72
PVT1-208ENST00000519481 AADACL2Q6P093 401 aa10.53□□□□□ -0.72
PVT1-208ENST00000519481 SPESP1Q6UW49 350 aa10.53□□□□□ -0.72
PVT1-208ENST00000519481 MED25Q71SY5 747 aa10.53□□□□□ -0.72
PVT1-208ENST00000519481 TBC1D21Q8IYX1 336 aa10.53□□□□□ -0.72
PVT1-208ENST00000519481 ADGRF3Q8IZF5 1079 aa10.53□□□□□ -0.72
PVT1-208ENST00000519481 DNAAF3Q8N9W5 541 aa10.53□□□□□ -0.72
PVT1-208ENST00000519481 GALNT11Q8NCW6 608 aa10.53□□□□□ -0.72
PVT1-208ENST00000519481 ELMO1Q92556 727 aa10.53□□□□□ -0.72
PVT1-208ENST00000519481 TCTN2Q96GX1 697 aa10.53□□□□□ -0.72
PVT1-208ENST00000519481 MRFAP1L1Q96HT8 127 aa10.53□□□□□ -0.72
PVT1-208ENST00000519481 SGSM3Q96HU1 749 aa10.53□□□□□ -0.72
PVT1-208ENST00000519481 IP6K3Q96PC2 410 aa10.53□□□□□ -0.72
PVT1-208ENST00000519481 DHRS4Q9BTZ2 278 aa10.53□□□□□ -0.72
PVT1-208ENST00000519481 KLHL25Q9H0H3 589 aa10.53□□□□□ -0.72
PVT1-208ENST00000519481 XKR8Q9H6D3 395 aa10.53□□□□□ -0.72
PVT1-208ENST00000519481 LRRC4CQ9HCJ2 640 aa10.53□□□□□ -0.72
PVT1-208ENST00000519481 IRAK4Q9NWZ3 460 aa10.53□□□□□ -0.72
PVT1-208ENST00000519481 COL12A1Q99715 3063 aa10.53□□□□□ -0.72
PVT1-208ENST00000519481 SPTBP11277 2137 aa10.52□□□□□ -0.72
PVT1-208ENST00000519481 CCDC78A2IDD5 438 aa10.52□□□□□ -0.73
PVT1-208ENST00000519481 CLEC18AA5D8T8 446 aa10.52□□□□□ -0.73
PVT1-208ENST00000519481 ERI2A8K979 691 aaKnown RBP10.52□□□□□ -0.73
PVT1-208ENST00000519481 ZNF185O15231 689 aa10.52□□□□□ -0.73
PVT1-208ENST00000519481 KLHL41O60662 606 aa10.52□□□□□ -0.73
PVT1-208ENST00000519481 OR2B3O76000 313 aa10.52□□□□□ -0.73
PVT1-208ENST00000519481 METTL18O95568 372 aa10.52□□□□□ -0.73
PVT1-208ENST00000519481 IGHEP01854 428 aa10.52□□□□□ -0.73
PVT1-208ENST00000519481 PDGFAP04085 211 aa10.52□□□□□ -0.73
PVT1-208ENST00000519481 PVRP15151 417 aa10.52□□□□□ -0.73
PVT1-208ENST00000519481 CDH17Q12864 832 aa10.52□□□□□ -0.73
PVT1-208ENST00000519481 BRD3Q15059 726 aa10.52□□□□□ -0.73
PVT1-208ENST00000519481 NCF4Q15080 339 aa10.52□□□□□ -0.73
PVT1-208ENST00000519481 FHL5Q5TD97 284 aa10.52□□□□□ -0.73
PVT1-208ENST00000519481 MLIPQ5VWP3 458 aa10.52□□□□□ -0.73
PVT1-208ENST00000519481 PAPD7Q5XG87 772 aaKnown RBP10.52□□□□□ -0.73
PVT1-208ENST00000519481 FAM198BQ6UWH4 519 aa10.52□□□□□ -0.73
PVT1-208ENST00000519481 CLEC18BQ6UXF7 455 aa10.52□□□□□ -0.73
PVT1-208ENST00000519481 PACS1Q6VY07 963 aa10.52□□□□□ -0.73
PVT1-208ENST00000519481 PPP1R21Q6ZMI0 780 aa10.52□□□□□ -0.73
PVT1-208ENST00000519481 CDHR3Q6ZTQ4 885 aa10.52□□□□□ -0.73
PVT1-208ENST00000519481 PIANPQ8IYJ0 282 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms