RNA–Protein interactions for RNA: ENST00000519254.2

CLN8-204, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLN8, Length 1,769 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-204ENST00000519254 WSB2Q9NYS7 404 aaPredicted RBP14.18□□□□□ -0.14
CLN8-204ENST00000519254 DLGAP2Q9P1A6 1054 aa14.18□□□□□ -0.14
CLN8-204ENST00000519254 PTBP2Q9UKA9 531 aaKnown RBP14.18□□□□□ -0.14
CLN8-204ENST00000519254 CA5BQ9Y2D0 317 aa14.18□□□□□ -0.14
CLN8-204ENST00000519254 VCANP13611 3396 aa14.18□□□□□ -0.14
CLN8-204ENST00000519254 IGHV1OR15-9A0A0B4J2B8 117 aa14.17□□□□□ -0.14
CLN8-204ENST00000519254 TMEM221A6NGB7 291 aa14.17□□□□□ -0.14
CLN8-204ENST00000519254 M0R296 226 aa14.17□□□□□ -0.14
CLN8-204ENST00000519254 SLC22A2O15244 555 aa14.17□□□□□ -0.14
CLN8-204ENST00000519254 PIK3R1P27986 724 aa14.17□□□□□ -0.14
CLN8-204ENST00000519254 PRDX3P30048 256 aaKnown RBP14.17□□□□□ -0.14
CLN8-204ENST00000519254 CLDN2P57739 230 aa14.17□□□□□ -0.14
CLN8-204ENST00000519254 CDK3Q00526 305 aa14.17□□□□□ -0.14
CLN8-204ENST00000519254 TMEM115Q12893 351 aaPredicted RBP14.17□□□□□ -0.14
CLN8-204ENST00000519254 PCBP2Q15366 365 aaKnown RBP eCLIP14.17□□□□□ -0.14
CLN8-204ENST00000519254 TSSK4Q6SA08 328 aa14.17□□□□□ -0.14
CLN8-204ENST00000519254 SYVN1Q86TM6 617 aa14.17□□□□□ -0.14
CLN8-204ENST00000519254 NLRP8Q86W28 1048 aa14.17□□□□□ -0.14
CLN8-204ENST00000519254 DEFB119Q8N690 84 aa14.17□□□□□ -0.14
CLN8-204ENST00000519254 BEND7Q8N7W2 519 aaPredicted RBP14.17□□□□□ -0.14
CLN8-204ENST00000519254 RASGEF1AQ8N9B8 481 aa14.17□□□□□ -0.14
CLN8-204ENST00000519254 HGH1Q9BTY7 390 aa14.17□□□□□ -0.14
CLN8-204ENST00000519254 LGR4Q9BXB1 951 aa14.17□□□□□ -0.14
CLN8-204ENST00000519254 TUBB1Q9H4B7 451 aa14.17□□□□□ -0.14
CLN8-204ENST00000519254 FAM8A1Q9UBU6 413 aa14.17□□□□□ -0.14
CLN8-204ENST00000519254 TMEM98Q9Y2Y6 226 aa14.17□□□□□ -0.14
CLN8-204ENST00000519254 COPG1Q9Y678 874 aaKnown RBP14.17□□□□□ -0.14
CLN8-204ENST00000519254 ZFC3H1O60293 1989 aaKnown RBP14.17□□□□□ -0.14
CLN8-204ENST00000519254 LOC100653049A0A140TA62 436 aa14.17□□□□□ -0.14
CLN8-204ENST00000519254 MEI4A8MW99 385 aa14.17□□□□□ -0.14
CLN8-204ENST00000519254 K7ESF4 209 aa14.17□□□□□ -0.14
CLN8-204ENST00000519254 EIF3FO00303 357 aaPredicted RBP14.17□□□□□ -0.14
CLN8-204ENST00000519254 TAPBPO15533 448 aa14.17□□□□□ -0.14
CLN8-204ENST00000519254 NDUFS2O75306 463 aa14.17□□□□□ -0.14
CLN8-204ENST00000519254 KRT34O76011 436 aa14.17□□□□□ -0.14
CLN8-204ENST00000519254 AP2A2O94973 939 aa14.17□□□□□ -0.14
CLN8-204ENST00000519254 ATP6V1G2O95670 118 aa14.17□□□□□ -0.14
CLN8-204ENST00000519254 MLYCDO95822 493 aa14.17□□□□□ -0.14
CLN8-204ENST00000519254 ADSLP30566 484 aaPredicted RBP14.17□□□□□ -0.14
CLN8-204ENST00000519254 MNAT1P51948 309 aa14.17□□□□□ -0.14
CLN8-204ENST00000519254 CTSCP53634 463 aa14.17□□□□□ -0.14
CLN8-204ENST00000519254 DMWDQ09019 674 aa14.17□□□□□ -0.14
CLN8-204ENST00000519254 KIAA0895LQ68EN5 471 aa14.17□□□□□ -0.14
CLN8-204ENST00000519254 LARP4Q71RC2 724 aaKnown RBP eCLIP14.17□□□□□ -0.14
CLN8-204ENST00000519254 C19orf60Q96EN9 201 aa14.17□□□□□ -0.14
CLN8-204ENST00000519254 IER2Q9BTL4 223 aa14.17□□□□□ -0.14
CLN8-204ENST00000519254 ZCCHC2Q9C0B9 1178 aaKnown RBP14.17□□□□□ -0.14
CLN8-204ENST00000519254 ATXN10Q9UBB4 475 aa14.17□□□□□ -0.14
CLN8-204ENST00000519254 PTGDR2Q9Y5Y4 395 aa14.17□□□□□ -0.14
CLN8-204ENST00000519254 H0Y8X5 98 aa14.16□□□□□ -0.14
CLN8-204ENST00000519254 AXIN1O15169 862 aa14.16□□□□□ -0.14
CLN8-204ENST00000519254 ESRRBO95718 433 aa14.16□□□□□ -0.14
CLN8-204ENST00000519254 GUCA1CO95843 209 aa14.16□□□□□ -0.14
CLN8-204ENST00000519254 S100BP04271 92 aaPredicted RBP14.16□□□□□ -0.14
CLN8-204ENST00000519254 IGHV4-34P06331 123 aa14.16□□□□□ -0.14
CLN8-204ENST00000519254 ENO3P13929 434 aaPredicted RBP14.16□□□□□ -0.14
CLN8-204ENST00000519254 HNRNPA2B1P22626 353 aaKnown RBP14.16□□□□□ -0.14
CLN8-204ENST00000519254 PBLDP30039 288 aaPredicted RBP14.16□□□□□ -0.14
CLN8-204ENST00000519254 PGM1P36871 562 aa14.16□□□□□ -0.14
CLN8-204ENST00000519254 GTF2H3Q13889 308 aa14.16□□□□□ -0.14
CLN8-204ENST00000519254 CRTC3Q6UUV7 619 aa14.16□□□□□ -0.14
CLN8-204ENST00000519254 ADGRG6Q86SQ4 1221 aa14.16□□□□□ -0.14
CLN8-204ENST00000519254 TRAPPC5Q8IUR0 188 aa14.16□□□□□ -0.14
CLN8-204ENST00000519254 VRK3Q8IV63 474 aa14.16□□□□□ -0.14
CLN8-204ENST00000519254 OR56A4Q8NGH8 313 aa14.16□□□□□ -0.14
CLN8-204ENST00000519254 TWIST2Q8WVJ9 160 aa14.16□□□□□ -0.14
CLN8-204ENST00000519254 MMADHCQ9H3L0 296 aaPredicted RBP14.16□□□□□ -0.14
CLN8-204ENST00000519254 RDH14Q9HBH5 336 aa14.16□□□□□ -0.14
CLN8-204ENST00000519254 TRIM39Q9HCM9 518 aa14.16□□□□□ -0.14
CLN8-204ENST00000519254 PHPT1Q9NRX4 125 aaPredicted RBP14.16□□□□□ -0.14
CLN8-204ENST00000519254 TNPO3Q9Y5L0 923 aaKnown RBP14.16□□□□□ -0.14
CLN8-204ENST00000519254 ATP6AP2A0A1C7CYW4 349 aa14.15□□□□□ -0.14
CLN8-204ENST00000519254 FPGTO14772 594 aa14.15□□□□□ -0.14
CLN8-204ENST00000519254 PIP5K1BO14986 540 aa14.15□□□□□ -0.14
CLN8-204ENST00000519254 NUAK1O60285 661 aa14.15□□□□□ -0.14
CLN8-204ENST00000519254 ATP6AP2O75787 350 aa14.15□□□□□ -0.14
CLN8-204ENST00000519254 VCLP18206 1134 aa14.15□□□□□ -0.14
CLN8-204ENST00000519254 MXRA7P84157 204 aa14.15□□□□□ -0.14
CLN8-204ENST00000519254 SLC25A3Q00325 362 aa14.15□□□□□ -0.14
CLN8-204ENST00000519254 HSPA14Q0VDF9 509 aa14.15□□□□□ -0.14
CLN8-204ENST00000519254 BOP1Q14137 746 aaKnown RBP14.15□□□□□ -0.14
CLN8-204ENST00000519254 RBBP7Q16576 425 aa14.15□□□□□ -0.14
CLN8-204ENST00000519254 PLEKHS1Q5SXH7 462 aa14.15□□□□□ -0.14
CLN8-204ENST00000519254 TMEM220Q6QAJ8 160 aa14.15□□□□□ -0.14
CLN8-204ENST00000519254 MCUR1Q96AQ8 359 aa14.15□□□□□ -0.14
CLN8-204ENST00000519254 BIRC7Q96CA5 298 aa14.15□□□□□ -0.14
CLN8-204ENST00000519254 RHBDF1Q96CC6 855 aa14.15□□□□□ -0.14
CLN8-204ENST00000519254 COX14Q96I36 57 aa14.15□□□□□ -0.14
CLN8-204ENST00000519254 SPACA7Q96KW9 195 aa14.15□□□□□ -0.14
CLN8-204ENST00000519254 ZNF382Q96SR6 550 aa14.15□□□□□ -0.14
CLN8-204ENST00000519254 TEX101Q9BY14 249 aa14.15□□□□□ -0.14
CLN8-204ENST00000519254 EBF2Q9HAK2 575 aa14.15□□□□□ -0.14
CLN8-204ENST00000519254 BAIAP2L1Q9UHR4 511 aa14.15□□□□□ -0.14
CLN8-204ENST00000519254 PRKAB1Q9Y478 270 aa14.15□□□□□ -0.14
CLN8-204ENST00000519254 TIMM22Q9Y584 194 aa14.15□□□□□ -0.14
CLN8-204ENST00000519254 TECTAO75443 2155 aa14.14□□□□□ -0.15
CLN8-204ENST00000519254 POM121BA6NF01 834 aa14.14□□□□□ -0.15
CLN8-204ENST00000519254 UBDO15205 165 aa14.14□□□□□ -0.15
CLN8-204ENST00000519254 LATO43561 262 aa14.14□□□□□ -0.15
CLN8-204ENST00000519254 MPC1LP0DKB6 136 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms