RNA–Protein interactions for RNA: ENST00000518885.1

CNOT7-204, Transcript of CCR4-NOT transcription complex subunit 7, human

TSL 3

Gene CNOT7, Length 477 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CNOT7-204	ENST00000518885	SPAG6	O75602	509 aa		23.48	■■□□□ 1.35
CNOT7-204	ENST00000518885	NMBR	P28336	390 aa		23.48	■■□□□ 1.35
CNOT7-204	ENST00000518885	KPNA2	P52292	529 aa	Known RBP	23.48	■■□□□ 1.35
CNOT7-204	ENST00000518885	TERF1	P54274	439 aa		23.48	■■□□□ 1.35
CNOT7-204	ENST00000518885	HSPA14	Q0VDF9	509 aa		23.48	■■□□□ 1.35
CNOT7-204	ENST00000518885	PRKG2	Q13237	762 aa		23.48	■■□□□ 1.35
CNOT7-204	ENST00000518885	KIAA0930	Q6ICG6	404 aa	Predicted RBP	23.48	■■□□□ 1.35
CNOT7-204	ENST00000518885	TTC23L	Q6PF05	361 aa		23.48	■■□□□ 1.35
CNOT7-204	ENST00000518885	SLC22A15	Q8IZD6	547 aa		23.48	■■□□□ 1.35
CNOT7-204	ENST00000518885	TTC9	Q92623	222 aa		23.48	■■□□□ 1.35
CNOT7-204	ENST00000518885	ELMO2	Q96JJ3	720 aa		23.48	■■□□□ 1.35
CNOT7-204	ENST00000518885	PDLIM2	Q96JY6	352 aa		23.48	■■□□□ 1.35
CNOT7-204	ENST00000518885	CATSPER2	Q96P56	530 aa		23.48	■■□□□ 1.35
CNOT7-204	ENST00000518885	SDK2	Q58EX2	2172 aa		23.48	■■□□□ 1.35
CNOT7-204	ENST00000518885	MGA	Q8IWI9	3026 aa		23.48	■■□□□ 1.35
CNOT7-204	ENST00000518885	KIAA0754	O94854	1291 aa		23.47	■■□□□ 1.35
CNOT7-204	ENST00000518885	EBLN1	P0CF75	366 aa		23.47	■■□□□ 1.35
CNOT7-204	ENST00000518885	SFTPC	P11686	197 aa		23.47	■■□□□ 1.35
CNOT7-204	ENST00000518885	RPS3	P23396	243 aa	Known RBP eCLIP	23.47	■■□□□ 1.35
CNOT7-204	ENST00000518885	ACADL	P28330	430 aa		23.47	■■□□□ 1.35
CNOT7-204	ENST00000518885	STAT5A	P42229	794 aa		23.47	■■□□□ 1.35
CNOT7-204	ENST00000518885	C19orf57	Q0VDD7	668 aa		23.47	■■□□□ 1.35
CNOT7-204	ENST00000518885	SEMA3A	Q14563	771 aa		23.47	■■□□□ 1.35
CNOT7-204	ENST00000518885	OR5AR1	Q8NGP9	310 aa		23.47	■■□□□ 1.35
CNOT7-204	ENST00000518885	CPT1B	Q92523	772 aa		23.47	■■□□□ 1.35
CNOT7-204	ENST00000518885	SLC45A3	Q96JT2	553 aa		23.47	■■□□□ 1.35
CNOT7-204	ENST00000518885	OR6C2	Q9NZP2	312 aa		23.47	■■□□□ 1.35
CNOT7-204	ENST00000518885	BTRC	Q9Y297	605 aa		23.47	■■□□□ 1.35
CNOT7-204	ENST00000518885	TDRKH	Q9Y2W6	561 aa	Known RBP	23.47	■■□□□ 1.35
CNOT7-204	ENST00000518885	TCRBV7S3A2	A0A539	114 aa		23.46	■■□□□ 1.35
CNOT7-204	ENST00000518885	PIPSL	A2A3N6	862 aa		23.46	■■□□□ 1.35
CNOT7-204	ENST00000518885	BTN3A1	O00481	513 aa		23.46	■■□□□ 1.35
CNOT7-204	ENST00000518885	FOLR1	P15328	257 aa		23.46	■■□□□ 1.35
CNOT7-204	ENST00000518885	ITGB6	P18564	788 aa		23.46	■■□□□ 1.35
CNOT7-204	ENST00000518885	PRDX3	P30048	256 aa	Known RBP	23.46	■■□□□ 1.35
CNOT7-204	ENST00000518885	CCR7	P32248	378 aa		23.46	■■□□□ 1.35
CNOT7-204	ENST00000518885	ARCN1	P48444	511 aa	Known RBP	23.46	■■□□□ 1.35
CNOT7-204	ENST00000518885	SRSF6	Q13247	344 aa	Known RBP	23.46	■■□□□ 1.35
CNOT7-204	ENST00000518885	UNC5D	Q6UXZ4	953 aa		23.46	■■□□□ 1.35
CNOT7-204	ENST00000518885	MICALCL	Q6ZW33	695 aa		23.46	■■□□□ 1.35
CNOT7-204	ENST00000518885	OTOA	Q7RTW8	1153 aa		23.46	■■□□□ 1.35
CNOT7-204	ENST00000518885	PCGF5	Q86SE9	256 aa		23.46	■■□□□ 1.35
CNOT7-204	ENST00000518885	PPIL6	Q8IXY8	311 aa		23.46	■■□□□ 1.35
CNOT7-204	ENST00000518885	MFSD3	Q96ES6	412 aa		23.46	■■□□□ 1.35
CNOT7-204	ENST00000518885	RUNDC3B	Q96NL0	473 aa		23.46	■■□□□ 1.35
CNOT7-204	ENST00000518885	MARCH4	Q9P2E8	410 aa	Predicted RBP	23.46	■■□□□ 1.35
CNOT7-204	ENST00000518885	KCND3	Q9UK17	655 aa		23.46	■■□□□ 1.35
CNOT7-204	ENST00000518885	PADI1	Q9ULC6	663 aa		23.46	■■□□□ 1.35
CNOT7-204	ENST00000518885	RPS6KL1	Q9Y6S9	549 aa		23.46	■■□□□ 1.35
CNOT7-204	ENST00000518885	FAM237B	A0A1B0GVD1	139 aa		23.45	■■□□□ 1.34
CNOT7-204	ENST00000518885	BHMG1	C9JSJ3	638 aa	Predicted RBP	23.45	■■□□□ 1.34
CNOT7-204	ENST00000518885	OGN	P20774	298 aa	Known RBP	23.45	■■□□□ 1.34
CNOT7-204	ENST00000518885	CSE1L	P55060	971 aa	Known RBP	23.45	■■□□□ 1.34
CNOT7-204	ENST00000518885	GNG11	P61952	73 aa		23.45	■■□□□ 1.34
CNOT7-204	ENST00000518885	KCNAB1	Q14722	419 aa		23.45	■■□□□ 1.34
CNOT7-204	ENST00000518885	TIPARP	Q7Z3E1	657 aa	Known RBP	23.45	■■□□□ 1.34
CNOT7-204	ENST00000518885	LDB1	Q86U70	411 aa	Predicted RBP	23.45	■■□□□ 1.34
CNOT7-204	ENST00000518885	RAB42	Q8N4Z0	105 aa		23.45	■■□□□ 1.34
CNOT7-204	ENST00000518885	GABPB2	Q8TAK5	448 aa	Predicted RBP	23.45	■■□□□ 1.34
CNOT7-204	ENST00000518885	PITPNM3	Q9BZ71	974 aa		23.45	■■□□□ 1.34
CNOT7-204	ENST00000518885	P2RY12	Q9H244	342 aa		23.45	■■□□□ 1.34
CNOT7-204	ENST00000518885	LATS2	Q9NRM7	1088 aa		23.45	■■□□□ 1.34
CNOT7-204	ENST00000518885	KCND1	Q9NSA2	647 aa		23.45	■■□□□ 1.34
CNOT7-204	ENST00000518885	ACTR10	Q9NZ32	417 aa		23.45	■■□□□ 1.34
CNOT7-204	ENST00000518885	PCDHB3	Q9Y5E6	796 aa		23.45	■■□□□ 1.34
CNOT7-204	ENST00000518885	SLC9B1P1	A6NJY1	282 aa		23.44	■■□□□ 1.34
CNOT7-204	ENST00000518885	BTN3A3	O00478	584 aa		23.44	■■□□□ 1.34
CNOT7-204	ENST00000518885	AVIL	O75366	819 aa		23.44	■■□□□ 1.34
CNOT7-204	ENST00000518885	GPC4	O75487	556 aa		23.44	■■□□□ 1.34
CNOT7-204	ENST00000518885	ESR1	P03372	595 aa		23.44	■■□□□ 1.34
CNOT7-204	ENST00000518885	MSL3P1	P0C860	447 aa		23.44	■■□□□ 1.34
CNOT7-204	ENST00000518885	AOAH	P28039	575 aa		23.44	■■□□□ 1.34
CNOT7-204	ENST00000518885	ADAR	P55265	1226 aa	Known RBP	23.44	■■□□□ 1.34
CNOT7-204	ENST00000518885	EIF3B	P55884	814 aa	Known RBP	23.44	■■□□□ 1.34
CNOT7-204	ENST00000518885	THOC5	Q13769	683 aa	Known RBP	23.44	■■□□□ 1.34
CNOT7-204	ENST00000518885	DHX34	Q14147	1143 aa	Known RBP	23.44	■■□□□ 1.34
CNOT7-204	ENST00000518885	CAND1	Q86VP6	1230 aa	Known RBP	23.44	■■□□□ 1.34
CNOT7-204	ENST00000518885	TMEM126B	Q8IUX1	230 aa		23.44	■■□□□ 1.34
CNOT7-204	ENST00000518885	LMNTD2	Q8IXW0	634 aa		23.44	■■□□□ 1.34
CNOT7-204	ENST00000518885	GALNT6	Q8NCL4	622 aa		23.44	■■□□□ 1.34
CNOT7-204	ENST00000518885	FOPNL	Q96NB1	174 aa		23.44	■■□□□ 1.34
CNOT7-204	ENST00000518885	SERPINB12	Q96P63	405 aa		23.44	■■□□□ 1.34
CNOT7-204	ENST00000518885	SLC12A9	Q9BXP2	914 aa		23.44	■■□□□ 1.34
CNOT7-204	ENST00000518885	INTS10	Q9NVR2	710 aa	Known RBP	23.44	■■□□□ 1.34
CNOT7-204	ENST00000518885	ASIC3	Q9UHC3	531 aa		23.44	■■□□□ 1.34
CNOT7-204	ENST00000518885	ICK	Q9UPZ9	632 aa		23.44	■■□□□ 1.34
CNOT7-204	ENST00000518885	NEU2	Q9Y3R4	380 aa		23.44	■■□□□ 1.34
CNOT7-204	ENST00000518885	SMG1	Q96Q15	3661 aa	Known RBP	23.44	■■□□□ 1.34
CNOT7-204	ENST00000518885	LOC101059948	A0A1B0GTJ6	334 aa		23.43	■■□□□ 1.34
CNOT7-204	ENST00000518885	CPNE3	O75131	537 aa	Known RBP	23.43	■■□□□ 1.34
CNOT7-204	ENST00000518885	TMEM63A	O94886	807 aa		23.43	■■□□□ 1.34
CNOT7-204	ENST00000518885	SLCO2B1	O94956	709 aa		23.43	■■□□□ 1.34
CNOT7-204	ENST00000518885	ZNF28	P17035	718 aa		23.43	■■□□□ 1.34
CNOT7-204	ENST00000518885	TYSND1	Q2T9J0	566 aa		23.43	■■□□□ 1.34
CNOT7-204	ENST00000518885	CRTC2	Q53ET0	693 aa	Predicted RBP	23.43	■■□□□ 1.34
CNOT7-204	ENST00000518885	PLEKHS1	Q5SXH7	462 aa		23.43	■■□□□ 1.34
CNOT7-204	ENST00000518885	ANKRD22	Q5VYY1	191 aa		23.43	■■□□□ 1.34
CNOT7-204	ENST00000518885	PWWP2B	Q6NUJ5	590 aa		23.43	■■□□□ 1.34
CNOT7-204	ENST00000518885	NEPRO	Q6NW34	567 aa		23.43	■■□□□ 1.34
CNOT7-204	ENST00000518885	SPESP1	Q6UW49	350 aa		23.43	■■□□□ 1.34

Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms