RNA–Protein interactions for RNA: ENST00000515597.1

LINC01088-211, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 1 (best)

Gene LINC01088, Length 664 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-211ENST00000515597 HADHAP40939 763 aa3.45□□□□□ -1.86
LINC01088-211ENST00000515597 BMXP51813 675 aa3.45□□□□□ -1.86
LINC01088-211ENST00000515597 EIF5P55010 431 aaKnown RBP3.45□□□□□ -1.86
LINC01088-211ENST00000515597 PPARDQ03181 441 aa3.45□□□□□ -1.86
LINC01088-211ENST00000515597 SIM2Q14190 667 aaPredicted RBP3.45□□□□□ -1.86
LINC01088-211ENST00000515597 ZNF239Q16600 458 aaKnown RBP3.45□□□□□ -1.86
LINC01088-211ENST00000515597 GTDC1Q4AE62 458 aa3.45□□□□□ -1.86
LINC01088-211ENST00000515597 ADAMTSL4-AS1Q5T5F5 129 aa3.45□□□□□ -1.86
LINC01088-211ENST00000515597 ITPRIPL1Q6GPH6 555 aa3.45□□□□□ -1.86
LINC01088-211ENST00000515597 KIAA0930Q6ICG6 404 aaPredicted RBP3.45□□□□□ -1.86
LINC01088-211ENST00000515597 MCEMP1Q8IX19 187 aa3.45□□□□□ -1.86
LINC01088-211ENST00000515597 ZNF611Q8N823 705 aa3.45□□□□□ -1.86
LINC01088-211ENST00000515597 SAT2Q96F10 170 aaPredicted RBP3.45□□□□□ -1.86
LINC01088-211ENST00000515597 GIMAP5Q96F15 307 aa3.45□□□□□ -1.86
LINC01088-211ENST00000515597 GMPPAQ96IJ6 420 aaPredicted RBP3.45□□□□□ -1.86
LINC01088-211ENST00000515597 ZNF582Q96NG8 517 aaPredicted RBP3.45□□□□□ -1.86
LINC01088-211ENST00000515597 DDOQ99489 341 aa3.45□□□□□ -1.86
LINC01088-211ENST00000515597 HGH1Q9BTY7 390 aa3.45□□□□□ -1.86
LINC01088-211ENST00000515597 HAUS2Q9NVX0 235 aa3.45□□□□□ -1.86
LINC01088-211ENST00000515597 PAG1Q9NWQ8 432 aa3.45□□□□□ -1.86
LINC01088-211ENST00000515597 EXO1Q9UQ84 846 aaKnown RBP3.45□□□□□ -1.86
LINC01088-211ENST00000515597 TTC37Q6PGP7 1564 aa3.45□□□□□ -1.86
LINC01088-211ENST00000515597 ZNF644Q9H582 1327 aaPredicted RBP3.44□□□□□ -1.86
LINC01088-211ENST00000515597 NCOA1Q15788 1441 aa3.44□□□□□ -1.86
LINC01088-211ENST00000515597 PREX1Q8TCU6 1659 aa3.44□□□□□ -1.86
LINC01088-211ENST00000515597 WDR7Q9Y4E6 1490 aa3.44□□□□□ -1.86
LINC01088-211ENST00000515597 TNIKQ9UKE5 1360 aa3.44□□□□□ -1.86
LINC01088-211ENST00000515597 IGHV4-61A0A0C4DH41 118 aa3.44□□□□□ -1.86
LINC01088-211ENST00000515597 A0A1W2PR77 199 aa3.44□□□□□ -1.86
LINC01088-211ENST00000515597 A6NCN8 305 aa3.44□□□□□ -1.86
LINC01088-211ENST00000515597 LRRC72A6NJI9 287 aa3.44□□□□□ -1.86
LINC01088-211ENST00000515597 B4DLN1 442 aa3.44□□□□□ -1.86
LINC01088-211ENST00000515597 NDUFS4O43181 175 aa3.44□□□□□ -1.86
LINC01088-211ENST00000515597 DOK2O60496 412 aa3.44□□□□□ -1.86
LINC01088-211ENST00000515597 SORBS2O94875 1100 aaKnown RBP3.44□□□□□ -1.86
LINC01088-211ENST00000515597 AP2A2O94973 939 aa3.44□□□□□ -1.86
LINC01088-211ENST00000515597 NGFP01138 241 aa3.44□□□□□ -1.86
LINC01088-211ENST00000515597 IGHV4-59P01825 116 aa3.44□□□□□ -1.86
LINC01088-211ENST00000515597 EDN1P05305 212 aa3.44□□□□□ -1.86
LINC01088-211ENST00000515597 TPOP07202 933 aa3.44□□□□□ -1.86
LINC01088-211ENST00000515597 CEACAM8P31997 349 aaPredicted RBP3.44□□□□□ -1.86
LINC01088-211ENST00000515597 CASP2P42575 452 aa3.44□□□□□ -1.86
LINC01088-211ENST00000515597 MRPL12P52815 198 aaKnown RBP3.44□□□□□ -1.86
LINC01088-211ENST00000515597 MFAP4P55083 255 aa3.44□□□□□ -1.86
LINC01088-211ENST00000515597 RPS18P62269 152 aaKnown RBP3.44□□□□□ -1.86
LINC01088-211ENST00000515597 MRPS5P82675 430 aaKnown RBP3.44□□□□□ -1.86
LINC01088-211ENST00000515597 MC1RQ01726 317 aa3.44□□□□□ -1.86
LINC01088-211ENST00000515597 PRKAA1Q13131 559 aa3.44□□□□□ -1.86
LINC01088-211ENST00000515597 KCNC3Q14003 757 aa3.44□□□□□ -1.86
LINC01088-211ENST00000515597 PLEKHS1Q5SXH7 462 aa3.44□□□□□ -1.86
LINC01088-211ENST00000515597 GCNT6Q5T4J0 391 aa3.44□□□□□ -1.86
LINC01088-211ENST00000515597 LINGO4Q6UY18 593 aa3.44□□□□□ -1.86
LINC01088-211ENST00000515597 CLEC17AQ6ZS10 378 aa3.44□□□□□ -1.86
LINC01088-211ENST00000515597 SCYL3Q8IZE3 742 aa3.44□□□□□ -1.86
LINC01088-211ENST00000515597 ZNF843Q8N446 348 aa3.44□□□□□ -1.86
LINC01088-211ENST00000515597 FAM120BQ96EK7 910 aaKnown RBP3.44□□□□□ -1.86
LINC01088-211ENST00000515597 SDF4Q9BRK5 362 aa3.44□□□□□ -1.86
LINC01088-211ENST00000515597 DNAJC18Q9H819 358 aa3.44□□□□□ -1.86
LINC01088-211ENST00000515597 RPS10P5Q9NQ39 176 aa3.44□□□□□ -1.86
LINC01088-211ENST00000515597 VPS28Q9UK41 221 aa3.44□□□□□ -1.86
LINC01088-211ENST00000515597 ZNF215Q9UL58 517 aaPredicted RBP3.44□□□□□ -1.86
LINC01088-211ENST00000515597 DISP1Q96F81 1524 aa3.44□□□□□ -1.86
LINC01088-211ENST00000515597 IGLV9-49A0A0B4J1Y8 123 aa3.43□□□□□ -1.86
LINC01088-211ENST00000515597 DCXO43602 365 aa3.43□□□□□ -1.86
LINC01088-211ENST00000515597 MITFO75030 526 aaPredicted RBP3.43□□□□□ -1.86
LINC01088-211ENST00000515597 CEBPBP17676 345 aa3.43□□□□□ -1.86
LINC01088-211ENST00000515597 ALOX12P18054 663 aa3.43□□□□□ -1.86
LINC01088-211ENST00000515597 GARSP41250 739 aaKnown RBP3.43□□□□□ -1.86
LINC01088-211ENST00000515597 CREB5Q02930 508 aa3.43□□□□□ -1.86
LINC01088-211ENST00000515597 P2RY6Q15077 328 aa3.43□□□□□ -1.86
LINC01088-211ENST00000515597 CTU2Q2VPK5 515 aaKnown RBP3.43□□□□□ -1.86
LINC01088-211ENST00000515597 LCE3AQ5TA76 89 aa3.43□□□□□ -1.86
LINC01088-211ENST00000515597 ADALQ6DHV7 355 aa3.43□□□□□ -1.86
LINC01088-211ENST00000515597 BHLHB9Q6PI77 547 aa3.43□□□□□ -1.86
LINC01088-211ENST00000515597 ZNF440Q8IYI8 595 aa3.43□□□□□ -1.86
LINC01088-211ENST00000515597 SCML4Q8N228 414 aa3.43□□□□□ -1.86
LINC01088-211ENST00000515597 TBC1D16Q8TBP0 767 aa3.43□□□□□ -1.86
LINC01088-211ENST00000515597 MRGPRDQ8TDS7 321 aa3.43□□□□□ -1.86
LINC01088-211ENST00000515597 FAM222BQ8WU58 562 aa3.43□□□□□ -1.86
LINC01088-211ENST00000515597 DAZLQ92904 295 aaKnown RBP3.43□□□□□ -1.86
LINC01088-211ENST00000515597 TMEM143Q96AN5 459 aa3.43□□□□□ -1.86
LINC01088-211ENST00000515597 MOCOSQ96EN8 888 aa3.43□□□□□ -1.86
LINC01088-211ENST00000515597 SGK494Q96LW2 274 aa3.43□□□□□ -1.86
LINC01088-211ENST00000515597 BARD1Q99728 777 aaKnown RBP3.43□□□□□ -1.86
LINC01088-211ENST00000515597 VGLL1Q99990 258 aa3.43□□□□□ -1.86
LINC01088-211ENST00000515597 MCRIP2Q9BUT9 160 aaKnown RBP3.43□□□□□ -1.86
LINC01088-211ENST00000515597 HRH4Q9H3N8 390 aa3.43□□□□□ -1.86
LINC01088-211ENST00000515597 FLRT3Q9NZU0 649 aa3.43□□□□□ -1.86
LINC01088-211ENST00000515597 KLHL8Q9P2G9 620 aaPredicted RBP3.43□□□□□ -1.86
LINC01088-211ENST00000515597 AMACRQ9UHK6 382 aa3.43□□□□□ -1.86
LINC01088-211ENST00000515597 PNMA2Q9UL42 364 aa3.43□□□□□ -1.86
LINC01088-211ENST00000515597 ARHGEF12Q9NZN5 1544 aa3.43□□□□□ -1.86
LINC01088-211ENST00000515597 A0A087WW49 117 aa3.42□□□□□ -1.86
LINC01088-211ENST00000515597 MED19A0JLT2 244 aaPredicted RBP3.42□□□□□ -1.86
LINC01088-211ENST00000515597 ELOVL7A1L3X0 281 aa3.42□□□□□ -1.86
LINC01088-211ENST00000515597 PRR32B1ATL7 298 aa3.42□□□□□ -1.86
LINC01088-211ENST00000515597 H7C423 109 aa3.42□□□□□ -1.86
LINC01088-211ENST00000515597 TRMUO75648 421 aaKnown RBP3.42□□□□□ -1.86
LINC01088-211ENST00000515597 HMBSP08397 361 aa3.42□□□□□ -1.86
LINC01088-211ENST00000515597 ACP2P11117 423 aa3.42□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms