RNA–Protein interactions for RNA: ENST00000514929.1

SNF8-213, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 775 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-213ENST00000514929 TUBB2AQ13885 445 aa23.77■■□□□ 1.4
SNF8-213ENST00000514929 GPR19Q15760 415 aa23.77■■□□□ 1.4
SNF8-213ENST00000514929 TBC1D21Q8IYX1 336 aa23.77■■□□□ 1.4
SNF8-213ENST00000514929 OTUD6BQ8N6M0 293 aa23.77■■□□□ 1.4
SNF8-213ENST00000514929 STARD8Q92502 1023 aa23.77■■□□□ 1.4
SNF8-213ENST00000514929 TUBB2BQ9BVA1 445 aa23.77■■□□□ 1.4
SNF8-213ENST00000514929 CARD6Q9BX69 1037 aa23.77■■□□□ 1.4
SNF8-213ENST00000514929 POLG2Q9UHN1 485 aa23.77■■□□□ 1.4
SNF8-213ENST00000514929 CROTQ9UKG9 612 aa23.77■■□□□ 1.4
SNF8-213ENST00000514929 PADI1Q9ULC6 663 aa23.77■■□□□ 1.4
SNF8-213ENST00000514929 BTRCQ9Y297 605 aa23.77■■□□□ 1.4
SNF8-213ENST00000514929 TDRKHQ9Y2W6 561 aaKnown RBP23.77■■□□□ 1.4
SNF8-213ENST00000514929 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP23.76■■□□□ 1.39
SNF8-213ENST00000514929 PGRMC1O00264 195 aaKnown RBP23.76■■□□□ 1.39
SNF8-213ENST00000514929 PRMT5O14744 637 aaPredicted RBP23.76■■□□□ 1.39
SNF8-213ENST00000514929 MAP3K7O43318 606 aa23.76■■□□□ 1.39
SNF8-213ENST00000514929 CCR7P32248 378 aa23.76■■□□□ 1.39
SNF8-213ENST00000514929 SHMT2P34897 504 aa23.76■■□□□ 1.39
SNF8-213ENST00000514929 MC1RQ01726 317 aa23.76■■□□□ 1.39
SNF8-213ENST00000514929 HSPA14Q0VDF9 509 aa23.76■■□□□ 1.39
SNF8-213ENST00000514929 KCNJ11Q14654 390 aa23.76■■□□□ 1.39
SNF8-213ENST00000514929 PTRHD1Q6GMV3 140 aaKnown RBP23.76■■□□□ 1.39
SNF8-213ENST00000514929 BORAQ6PGQ7 559 aa23.76■■□□□ 1.39
SNF8-213ENST00000514929 ASZ1Q8WWH4 475 aa23.76■■□□□ 1.39
SNF8-213ENST00000514929 CATSPER2Q96P56 530 aa23.76■■□□□ 1.39
SNF8-213ENST00000514929 KIFC1Q9BW19 673 aa23.76■■□□□ 1.39
SNF8-213ENST00000514929 FANCEQ9HB96 536 aa23.76■■□□□ 1.39
SNF8-213ENST00000514929 MRM3Q9HC36 420 aaKnown RBP23.76■■□□□ 1.39
SNF8-213ENST00000514929 KCND1Q9NSA2 647 aa23.76■■□□□ 1.39
SNF8-213ENST00000514929 ICKQ9UPZ9 632 aa23.76■■□□□ 1.39
SNF8-213ENST00000514929 IQCF5A8MTL0 148 aa23.75■■□□□ 1.39
SNF8-213ENST00000514929 KIF5CO60282 957 aa23.75■■□□□ 1.39
SNF8-213ENST00000514929 NDUFS3O75489 264 aa23.75■■□□□ 1.39
SNF8-213ENST00000514929 NTRK1P04629 796 aa23.75■■□□□ 1.39
SNF8-213ENST00000514929 TCN2P20062 427 aa23.75■■□□□ 1.39
SNF8-213ENST00000514929 COILP38432 576 aaPredicted RBP23.75■■□□□ 1.39
SNF8-213ENST00000514929 CDC20Q12834 499 aa23.75■■□□□ 1.39
SNF8-213ENST00000514929 C16orf46Q6P387 395 aa23.75■■□□□ 1.39
SNF8-213ENST00000514929 CCDC137Q6PK04 289 aaKnown RBP23.75■■□□□ 1.39
SNF8-213ENST00000514929 CES3Q6UWW8 571 aa23.75■■□□□ 1.39
SNF8-213ENST00000514929 ZNF605Q86T29 641 aa23.75■■□□□ 1.39
SNF8-213ENST00000514929 HOOK3Q86VS8 718 aa23.75■■□□□ 1.39
SNF8-213ENST00000514929 TMEM126BQ8IUX1 230 aa23.75■■□□□ 1.39
SNF8-213ENST00000514929 ADGRF3Q8IZF5 1079 aa23.75■■□□□ 1.39
SNF8-213ENST00000514929 KRT222Q8N1A0 295 aa23.75■■□□□ 1.39
SNF8-213ENST00000514929 MPP5Q8N3R9 675 aa23.75■■□□□ 1.39
SNF8-213ENST00000514929 OR8K5Q8NH50 307 aa23.75■■□□□ 1.39
SNF8-213ENST00000514929 OR5K2Q8NHB8 316 aa23.75■■□□□ 1.39
SNF8-213ENST00000514929 LKAAEAR1Q8TD35 194 aa23.75■■□□□ 1.39
SNF8-213ENST00000514929 ZNF501Q96CX3 271 aaPredicted RBP23.75■■□□□ 1.39
SNF8-213ENST00000514929 MFSD3Q96ES6 412 aa23.75■■□□□ 1.39
SNF8-213ENST00000514929 OSBPL9Q96SU4 736 aa23.75■■□□□ 1.39
SNF8-213ENST00000514929 TRMT1Q9NXH9 659 aaKnown RBP23.75■■□□□ 1.39
SNF8-213ENST00000514929 ACTR10Q9NZ32 417 aa23.75■■□□□ 1.39
SNF8-213ENST00000514929 SOX13Q9UN79 622 aa23.75■■□□□ 1.39
SNF8-213ENST00000514929 MRPS18BQ9Y676 258 aaKnown RBP23.75■■□□□ 1.39
SNF8-213ENST00000514929 PIEZO2Q9H5I5 2752 aa23.74■■□□□ 1.39
SNF8-213ENST00000514929 PIPSLA2A3N6 862 aa23.74■■□□□ 1.39
SNF8-213ENST00000514929 KDM1AO60341 852 aa23.74■■□□□ 1.39
SNF8-213ENST00000514929 KATNA1O75449 491 aa23.74■■□□□ 1.39
SNF8-213ENST00000514929 SCRG1O75711 98 aa23.74■■□□□ 1.39
SNF8-213ENST00000514929 VAPBO95292 243 aa23.74■■□□□ 1.39
SNF8-213ENST00000514929 APOA4P06727 396 aa23.74■■□□□ 1.39
SNF8-213ENST00000514929 F8A1P23610 371 aa23.74■■□□□ 1.39
SNF8-213ENST00000514929 MAGEA6P43360 314 aa23.74■■□□□ 1.39
SNF8-213ENST00000514929 CYP1B1Q16678 543 aa23.74■■□□□ 1.39
SNF8-213ENST00000514929 SLC22A15Q8IZD6 547 aa23.74■■□□□ 1.39
SNF8-213ENST00000514929 PITPNM3Q9BZ71 974 aa23.74■■□□□ 1.39
SNF8-213ENST00000514929 KCNF1Q9H3M0 494 aa23.74■■□□□ 1.39
SNF8-213ENST00000514929 LHX9Q9NQ69 397 aa23.74■■□□□ 1.39
SNF8-213ENST00000514929 GNPTGQ9UJJ9 305 aa23.74■■□□□ 1.39
SNF8-213ENST00000514929 PCDHB3Q9Y5E6 796 aa23.74■■□□□ 1.39
SNF8-213ENST00000514929 AVILO75366 819 aa23.73■■□□□ 1.39
SNF8-213ENST00000514929 SFTPCP11686 197 aa23.73■■□□□ 1.39
SNF8-213ENST00000514929 ST6GAL1P15907 406 aa23.73■■□□□ 1.39
SNF8-213ENST00000514929 TMED2Q15363 201 aa23.73■■□□□ 1.39
SNF8-213ENST00000514929 DNAJC21Q5F1R6 531 aaKnown RBP23.73■■□□□ 1.39
SNF8-213ENST00000514929 ANKRD22Q5VYY1 191 aa23.73■■□□□ 1.39
SNF8-213ENST00000514929 MRNIPQ6NTE8 343 aa23.73■■□□□ 1.39
SNF8-213ENST00000514929 CASC4Q6P4E1 433 aa23.73■■□□□ 1.39
SNF8-213ENST00000514929 UNC5AQ6ZN44 842 aa23.73■■□□□ 1.39
SNF8-213ENST00000514929 SDCCAG8Q86SQ7 713 aaPredicted RBP23.73■■□□□ 1.39
SNF8-213ENST00000514929 LRRC6Q86X45 466 aa23.73■■□□□ 1.39
SNF8-213ENST00000514929 COG1Q8WTW3 980 aa23.73■■□□□ 1.39
SNF8-213ENST00000514929 ANP32BQ92688 251 aaKnown RBP23.73■■□□□ 1.39
SNF8-213ENST00000514929 PANX3Q96QZ0 392 aa23.73■■□□□ 1.39
SNF8-213ENST00000514929 KLHL25Q9H0H3 589 aa23.73■■□□□ 1.39
SNF8-213ENST00000514929 SYTL2Q9HCH5 934 aa23.73■■□□□ 1.39
SNF8-213ENST00000514929 KCND3Q9UK17 655 aa23.73■■□□□ 1.39
SNF8-213ENST00000514929 FASNP49327 2511 aaKnown RBP23.73■■□□□ 1.39
SNF8-213ENST00000514929 GOLGA6L10A0A0M3HER8 536 aa23.72■■□□□ 1.39
SNF8-213ENST00000514929 CPNE3O75131 537 aaKnown RBP23.72■■□□□ 1.39
SNF8-213ENST00000514929 GPC4O75487 556 aa23.72■■□□□ 1.39
SNF8-213ENST00000514929 PVRP15151 417 aa23.72■■□□□ 1.39
SNF8-213ENST00000514929 CCR10P46092 362 aa23.72■■□□□ 1.39
SNF8-213ENST00000514929 SPESP1Q6UW49 350 aa23.72■■□□□ 1.39
SNF8-213ENST00000514929 VRK3Q8IV63 474 aa23.72■■□□□ 1.39
SNF8-213ENST00000514929 CFAP61Q8NHU2 1237 aa23.72■■□□□ 1.39
SNF8-213ENST00000514929 GSDMBQ8TAX9 411 aa23.72■■□□□ 1.39
SNF8-213ENST00000514929 ACTRT1Q8TDG2 376 aa23.72■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms