RNA–Protein interactions for RNA: ENST00000514267.1

CALCOCO2-223, Transcript of calcium binding and coiled-coil domain 2, human

TSL 2

Gene CALCOCO2, Length 336 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CALCOCO2-223	ENST00000514267	ITGA7	Q13683	1181 aa		3.3	□□□□□ -1.88
CALCOCO2-223	ENST00000514267	HNF4G	Q14541	408 aa		3.3	□□□□□ -1.88
CALCOCO2-223	ENST00000514267	RRS1	Q15050	365 aa	Known RBP	3.3	□□□□□ -1.88
CALCOCO2-223	ENST00000514267	HLF	Q16534	295 aa		3.3	□□□□□ -1.88
CALCOCO2-223	ENST00000514267	ZNF585B	Q52M93	769 aa		3.3	□□□□□ -1.88
CALCOCO2-223	ENST00000514267	ZNF789	Q5FWF6	425 aa		3.3	□□□□□ -1.88
CALCOCO2-223	ENST00000514267	GCNT6	Q5T4J0	391 aa		3.3	□□□□□ -1.88
CALCOCO2-223	ENST00000514267	FAM69B	Q5VUD6	431 aa		3.3	□□□□□ -1.88
CALCOCO2-223	ENST00000514267	ALS2CL	Q60I27	953 aa		3.3	□□□□□ -1.88
CALCOCO2-223	ENST00000514267	ZNF324B	Q6AW86	544 aa	Predicted RBP	3.3	□□□□□ -1.88
CALCOCO2-223	ENST00000514267	TYW3	Q6IPR3	259 aa	Known RBP	3.3	□□□□□ -1.88
CALCOCO2-223	ENST00000514267	TATDN1	Q6P1N9	297 aa		3.3	□□□□□ -1.88
CALCOCO2-223	ENST00000514267	NOTUM	Q6P988	496 aa		3.3	□□□□□ -1.88
CALCOCO2-223	ENST00000514267		Q75L30	129 aa		3.3	□□□□□ -1.88
CALCOCO2-223	ENST00000514267	CTU1	Q7Z7A3	348 aa	Known RBP	3.3	□□□□□ -1.88
CALCOCO2-223	ENST00000514267	DSG4	Q86SJ6	1040 aa		3.3	□□□□□ -1.88
CALCOCO2-223	ENST00000514267	TLK2	Q86UE8	772 aa		3.3	□□□□□ -1.88
CALCOCO2-223	ENST00000514267	DZIP1	Q86YF9	867 aa	Known RBP	3.3	□□□□□ -1.88
CALCOCO2-223	ENST00000514267	CREBRF	Q8IUR6	639 aa		3.3	□□□□□ -1.88
CALCOCO2-223	ENST00000514267	C1orf52	Q8N6N3	182 aa	Known RBP	3.3	□□□□□ -1.88
CALCOCO2-223	ENST00000514267	SLC4A11	Q8NBS3	891 aa		3.3	□□□□□ -1.88
CALCOCO2-223	ENST00000514267	OR2AK2	Q8NG84	335 aa		3.3	□□□□□ -1.88
CALCOCO2-223	ENST00000514267	OCC1	Q8TAD7	63 aa		3.3	□□□□□ -1.88
CALCOCO2-223	ENST00000514267	MGARP	Q8TDB4	240 aa		3.3	□□□□□ -1.88
CALCOCO2-223	ENST00000514267	FAM216A	Q8WUB2	273 aa		3.3	□□□□□ -1.88
CALCOCO2-223	ENST00000514267	RND1	Q92730	232 aa		3.3	□□□□□ -1.88
CALCOCO2-223	ENST00000514267	CABS1	Q96KC9	395 aa		3.3	□□□□□ -1.88
CALCOCO2-223	ENST00000514267	SFXN2	Q96NB2	322 aa		3.3	□□□□□ -1.88
CALCOCO2-223	ENST00000514267	PARK7	Q99497	189 aa	Known RBP	3.3	□□□□□ -1.88
CALCOCO2-223	ENST00000514267	C16orf70	Q9BSU1	422 aa		3.3	□□□□□ -1.88
CALCOCO2-223	ENST00000514267	PI4K2A	Q9BTU6	479 aa		3.3	□□□□□ -1.88
CALCOCO2-223	ENST00000514267	FN3K	Q9H479	309 aa		3.3	□□□□□ -1.88
CALCOCO2-223	ENST00000514267	TMEM206	Q9H813	350 aa		3.3	□□□□□ -1.88
CALCOCO2-223	ENST00000514267	COQ3	Q9NZJ6	369 aa		3.3	□□□□□ -1.88
CALCOCO2-223	ENST00000514267	POLL	Q9UGP5	575 aa		3.3	□□□□□ -1.88
CALCOCO2-223	ENST00000514267	ITGA11	Q9UKX5	1188 aa		3.3	□□□□□ -1.88
CALCOCO2-223	ENST00000514267	ABT1	Q9ULW3	272 aa	Known RBP	3.3	□□□□□ -1.88
CALCOCO2-223	ENST00000514267	PADI3	Q9ULW8	664 aa		3.3	□□□□□ -1.88
CALCOCO2-223	ENST00000514267	B3GALT5	Q9Y2C3	310 aa		3.3	□□□□□ -1.88
CALCOCO2-223	ENST00000514267	KCNK7	Q9Y2U2	307 aa		3.3	□□□□□ -1.88
CALCOCO2-223	ENST00000514267	PCDHAC2	Q9Y5I4	1007 aa		3.3	□□□□□ -1.88
CALCOCO2-223	ENST00000514267	ABCA10	Q8WWZ4	1543 aa		3.29	□□□□□ -1.88
CALCOCO2-223	ENST00000514267	FHOD3	Q2V2M9	1422 aa		3.29	□□□□□ -1.88
CALCOCO2-223	ENST00000514267	PTPRC	P08575	1304 aa		3.29	□□□□□ -1.88
CALCOCO2-223	ENST00000514267		A0A0U1RQJ8	604 aa		3.29	□□□□□ -1.88
CALCOCO2-223	ENST00000514267	FEZF1	A0PJY2	475 aa		3.29	□□□□□ -1.88
CALCOCO2-223	ENST00000514267	OR2M5	A3KFT3	312 aa		3.29	□□□□□ -1.88
CALCOCO2-223	ENST00000514267	ANKRD66	B4E2M5	251 aa		3.29	□□□□□ -1.88
CALCOCO2-223	ENST00000514267	SOCS6	O14544	535 aa		3.29	□□□□□ -1.88
CALCOCO2-223	ENST00000514267	XRCC3	O43542	346 aa		3.29	□□□□□ -1.88
CALCOCO2-223	ENST00000514267	RGS14	O43566	566 aa		3.29	□□□□□ -1.88
CALCOCO2-223	ENST00000514267	OR10H2	O60403	315 aa		3.29	□□□□□ -1.88
CALCOCO2-223	ENST00000514267	CAMTA2	O94983	1202 aa		3.29	□□□□□ -1.88
CALCOCO2-223	ENST00000514267	MT-ND3	P03897	115 aa		3.29	□□□□□ -1.88
CALCOCO2-223	ENST00000514267	PLA2G4B	P0C869	781 aa		3.29	□□□□□ -1.88
CALCOCO2-223	ENST00000514267	GNAZ	P19086	355 aa		3.29	□□□□□ -1.88
CALCOCO2-223	ENST00000514267	C21orf33	P30042	268 aa	Predicted RBP	3.29	□□□□□ -1.88
CALCOCO2-223	ENST00000514267	TIA1	P31483	386 aa	Known RBP eCLIP	3.29	□□□□□ -1.88
CALCOCO2-223	ENST00000514267		Q0VFX4	171 aa		3.29	□□□□□ -1.88
CALCOCO2-223	ENST00000514267	TEF	Q10587	303 aa		3.29	□□□□□ -1.88
CALCOCO2-223	ENST00000514267	COASY	Q13057	564 aa		3.29	□□□□□ -1.88
CALCOCO2-223	ENST00000514267	OASL	Q15646	514 aa	Known RBP	3.29	□□□□□ -1.88
CALCOCO2-223	ENST00000514267	C9orf50	Q5SZB4	431 aa		3.29	□□□□□ -1.88
CALCOCO2-223	ENST00000514267	FNBP1L	Q5T0N5	605 aa		3.29	□□□□□ -1.88
CALCOCO2-223	ENST00000514267	RGMB	Q6NW40	437 aa		3.29	□□□□□ -1.88
CALCOCO2-223	ENST00000514267	ZNF449	Q6P9G9	518 aa		3.29	□□□□□ -1.88
CALCOCO2-223	ENST00000514267	CCNI2	Q6ZMN8	369 aa	Predicted RBP	3.29	□□□□□ -1.88
CALCOCO2-223	ENST00000514267	GBP6	Q6ZN66	633 aa		3.29	□□□□□ -1.88
CALCOCO2-223	ENST00000514267	ZNF704	Q6ZNC4	412 aa	Predicted RBP	3.29	□□□□□ -1.88
CALCOCO2-223	ENST00000514267	PHLDB2	Q86SQ0	1253 aa		3.29	□□□□□ -1.88
CALCOCO2-223	ENST00000514267	KLHL7	Q8IXQ5	586 aa		3.29	□□□□□ -1.88
CALCOCO2-223	ENST00000514267	DCP1B	Q8IZD4	617 aa	Known RBP	3.29	□□□□□ -1.88
CALCOCO2-223	ENST00000514267	SYCP3	Q8IZU3	236 aa		3.29	□□□□□ -1.88
CALCOCO2-223	ENST00000514267	NDUFAF2	Q8N183	169 aa		3.29	□□□□□ -1.88
CALCOCO2-223	ENST00000514267	NHLRC2	Q8NBF2	726 aa		3.29	□□□□□ -1.88
CALCOCO2-223	ENST00000514267	PPFIBP2	Q8ND30	876 aa		3.29	□□□□□ -1.88
CALCOCO2-223	ENST00000514267	OR7G3	Q8NG95	312 aa		3.29	□□□□□ -1.88
CALCOCO2-223	ENST00000514267	OR2AJ1	Q8NGZ0	328 aa		3.29	□□□□□ -1.88
CALCOCO2-223	ENST00000514267	NUDCD2	Q8WVJ2	157 aa		3.29	□□□□□ -1.88
CALCOCO2-223	ENST00000514267	TEKT1	Q969V4	418 aa		3.29	□□□□□ -1.88
CALCOCO2-223	ENST00000514267	MOB3A	Q96BX8	217 aa		3.29	□□□□□ -1.88
CALCOCO2-223	ENST00000514267	MTERF3	Q96E29	417 aa		3.29	□□□□□ -1.88
CALCOCO2-223	ENST00000514267	FAM81B	Q96LP2	452 aa		3.29	□□□□□ -1.88
CALCOCO2-223	ENST00000514267	ATP6V0B	Q99437	205 aa		3.29	□□□□□ -1.88
CALCOCO2-223	ENST00000514267	CPNE1	Q99829	537 aa		3.29	□□□□□ -1.88
CALCOCO2-223	ENST00000514267	BTBD10	Q9BSF8	475 aa		3.29	□□□□□ -1.88
CALCOCO2-223	ENST00000514267	SLC25A33	Q9BSK2	321 aa		3.29	□□□□□ -1.88
CALCOCO2-223	ENST00000514267	LMF2	Q9BU23	707 aa	Known RBP	3.29	□□□□□ -1.88
CALCOCO2-223	ENST00000514267	UTP14A	Q9BVJ6	771 aa	Known RBP	3.29	□□□□□ -1.88
CALCOCO2-223	ENST00000514267	DPAGT1	Q9H3H5	408 aa		3.29	□□□□□ -1.88
CALCOCO2-223	ENST00000514267	TUFT1	Q9NNX1	390 aa		3.29	□□□□□ -1.88
CALCOCO2-223	ENST00000514267	MID1IP1	Q9NPA3	183 aa		3.29	□□□□□ -1.88
CALCOCO2-223	ENST00000514267	CPSF3	Q9UKF6	684 aa	Known RBP	3.29	□□□□□ -1.88
CALCOCO2-223	ENST00000514267	PROCR	Q9UNN8	238 aa		3.29	□□□□□ -1.88
CALCOCO2-223	ENST00000514267	CUL7	Q14999	1698 aa		3.29	□□□□□ -1.88
CALCOCO2-223	ENST00000514267	TIAM1	Q13009	1591 aa		3.29	□□□□□ -1.88
CALCOCO2-223	ENST00000514267	URB2	Q14146	1524 aa	Known RBP	3.29	□□□□□ -1.88
CALCOCO2-223	ENST00000514267	GAPVD1	Q14C86	1478 aa		3.28	□□□□□ -1.88
CALCOCO2-223	ENST00000514267	LRRC9	Q6ZRR7	1453 aa		3.28	□□□□□ -1.88
CALCOCO2-223	ENST00000514267	FMN1	Q68DA7	1419 aa		3.28	□□□□□ -1.88

Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms