RNA–Protein interactions for RNA: ENST00000512274.1

PDLIM5-217, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 372 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-217ENST00000512274 AURKAO14965 403 aa10.29□□□□□ -0.76
PDLIM5-217ENST00000512274 YY2O15391 372 aa10.29□□□□□ -0.76
PDLIM5-217ENST00000512274 SPINT1O43278 529 aa10.29□□□□□ -0.76
PDLIM5-217ENST00000512274 SPAG7O75391 227 aa10.29□□□□□ -0.76
PDLIM5-217ENST00000512274 TGDSO95455 350 aa10.29□□□□□ -0.76
PDLIM5-217ENST00000512274 CLDN1O95832 211 aa10.29□□□□□ -0.76
PDLIM5-217ENST00000512274 PAK4O96013 591 aaPredicted RBP10.29□□□□□ -0.76
PDLIM5-217ENST00000512274 PRNPP04156 253 aa10.29□□□□□ -0.76
PDLIM5-217ENST00000512274 C2P06681 752 aa10.29□□□□□ -0.76
PDLIM5-217ENST00000512274 SLC35E2BP0CK96 405 aa10.29□□□□□ -0.76
PDLIM5-217ENST00000512274 CYP2A6P11509 494 aaPredicted RBP10.29□□□□□ -0.76
PDLIM5-217ENST00000512274 STMN1P16949 149 aa10.29□□□□□ -0.76
PDLIM5-217ENST00000512274 DRD4P21917 467 aa10.29□□□□□ -0.76
PDLIM5-217ENST00000512274 FDXRP22570 491 aa10.29□□□□□ -0.76
PDLIM5-217ENST00000512274 CCKBRP32239 447 aa10.29□□□□□ -0.76
PDLIM5-217ENST00000512274 SERPINB4P48594 390 aa10.29□□□□□ -0.76
PDLIM5-217ENST00000512274 EIF2B5Q13144 721 aaKnown RBP10.29□□□□□ -0.76
PDLIM5-217ENST00000512274 CTBP1Q13363 440 aa10.29□□□□□ -0.76
PDLIM5-217ENST00000512274 PEX6Q13608 980 aa10.29□□□□□ -0.76
PDLIM5-217ENST00000512274 FGL2Q14314 439 aa10.29□□□□□ -0.76
PDLIM5-217ENST00000512274 SEPT7Q16181 437 aaKnown RBP10.29□□□□□ -0.76
PDLIM5-217ENST00000512274 FASTKD1Q53R41 847 aaKnown RBP10.29□□□□□ -0.76
PDLIM5-217ENST00000512274 ZNF805Q5CZA5 627 aa10.29□□□□□ -0.76
PDLIM5-217ENST00000512274 MAMDC2Q7Z304 686 aaPredicted RBP10.29□□□□□ -0.76
PDLIM5-217ENST00000512274 TMPRSS9Q7Z410 1059 aa10.29□□□□□ -0.76
PDLIM5-217ENST00000512274 PIGWQ7Z7B1 504 aa10.29□□□□□ -0.76
PDLIM5-217ENST00000512274 NLRP8Q86W28 1048 aa10.29□□□□□ -0.76
PDLIM5-217ENST00000512274 ANKRD42Q8N9B4 389 aa10.29□□□□□ -0.76
PDLIM5-217ENST00000512274 KYQ8NBH2 561 aa10.29□□□□□ -0.76
PDLIM5-217ENST00000512274 CHST14Q8NCH0 376 aa10.29□□□□□ -0.76
PDLIM5-217ENST00000512274 OR6P1Q8NGX9 317 aa10.29□□□□□ -0.76
PDLIM5-217ENST00000512274 ZNF398Q8TD17 642 aa10.29□□□□□ -0.76
PDLIM5-217ENST00000512274 BCAS4Q8TDM0 211 aa10.29□□□□□ -0.76
PDLIM5-217ENST00000512274 DYDC1Q8WWB3 177 aa10.29□□□□□ -0.76
PDLIM5-217ENST00000512274 LPGAT1Q92604 370 aa10.29□□□□□ -0.76
PDLIM5-217ENST00000512274 NKD1Q969G9 470 aa10.29□□□□□ -0.76
PDLIM5-217ENST00000512274 TBRG4Q969Z0 631 aaKnown RBP eCLIP10.29□□□□□ -0.76
PDLIM5-217ENST00000512274 EID2BQ96D98 161 aa10.29□□□□□ -0.76
PDLIM5-217ENST00000512274 UBXN10Q96LJ8 280 aa10.29□□□□□ -0.76
PDLIM5-217ENST00000512274 PLCD4Q9BRC7 762 aa10.29□□□□□ -0.76
PDLIM5-217ENST00000512274 LRRN3Q9H3W5 708 aa10.29□□□□□ -0.76
PDLIM5-217ENST00000512274 IL1RAPL1Q9NZN1 696 aa10.29□□□□□ -0.76
PDLIM5-217ENST00000512274 KLHL42Q9P2K6 505 aa10.29□□□□□ -0.76
PDLIM5-217ENST00000512274 SLC17A6Q9P2U8 582 aa10.29□□□□□ -0.76
PDLIM5-217ENST00000512274 APOBEC3BQ9UH17 382 aaKnown RBP10.29□□□□□ -0.76
PDLIM5-217ENST00000512274 DOLKQ9UPQ8 538 aa10.29□□□□□ -0.76
PDLIM5-217ENST00000512274 TP53TG5Q9Y2B4 290 aa10.29□□□□□ -0.76
PDLIM5-217ENST00000512274 VWA7Q9Y334 891 aa10.29□□□□□ -0.76
PDLIM5-217ENST00000512274 KCTD3Q9Y597 815 aa10.29□□□□□ -0.76
PDLIM5-217ENST00000512274 HS3ST3A1Q9Y663 406 aa10.29□□□□□ -0.76
PDLIM5-217ENST00000512274 UNC13CQ8NB66 2214 aa10.29□□□□□ -0.76
PDLIM5-217ENST00000512274 C2CD3Q4AC94 2353 aa10.29□□□□□ -0.76
PDLIM5-217ENST00000512274 TARM1B6A8C7 271 aa10.28□□□□□ -0.76
PDLIM5-217ENST00000512274 H3BMM5 538 aa10.28□□□□□ -0.76
PDLIM5-217ENST00000512274 K7EM74 188 aa10.28□□□□□ -0.76
PDLIM5-217ENST00000512274 GAPDHSO14556 408 aaPredicted RBP10.28□□□□□ -0.76
PDLIM5-217ENST00000512274 NKX2-8O15522 239 aa10.28□□□□□ -0.76
PDLIM5-217ENST00000512274 DUX1O43812 170 aa10.28□□□□□ -0.76
PDLIM5-217ENST00000512274 H2AFYO75367 372 aaKnown RBP10.28□□□□□ -0.76
PDLIM5-217ENST00000512274 HAUS5O94927 633 aa10.28□□□□□ -0.76
PDLIM5-217ENST00000512274 KLHL2O95198 593 aa10.28□□□□□ -0.76
PDLIM5-217ENST00000512274 PIGNO95427 931 aa10.28□□□□□ -0.76
PDLIM5-217ENST00000512274 ESR1P03372 595 aa10.28□□□□□ -0.76
PDLIM5-217ENST00000512274 PROCP04070 461 aa10.28□□□□□ -0.76
PDLIM5-217ENST00000512274 CTSLP07711 333 aa10.28□□□□□ -0.76
PDLIM5-217ENST00000512274 BPGMP07738 259 aa10.28□□□□□ -0.76
PDLIM5-217ENST00000512274 CELA2BP08218 269 aaPredicted RBP10.28□□□□□ -0.76
PDLIM5-217ENST00000512274 ITGB7P26010 798 aa10.28□□□□□ -0.76
PDLIM5-217ENST00000512274 GRNP28799 593 aaKnown RBP10.28□□□□□ -0.76
PDLIM5-217ENST00000512274 SKIV2L2P42285 1042 aaKnown RBP10.28□□□□□ -0.76
PDLIM5-217ENST00000512274 MPP1Q00013 466 aa10.28□□□□□ -0.76
PDLIM5-217ENST00000512274 ITIH4Q14624 930 aa10.28□□□□□ -0.76
PDLIM5-217ENST00000512274 USP10Q14694 798 aaKnown RBP10.28□□□□□ -0.76
PDLIM5-217ENST00000512274 PHF19Q5T6S3 580 aa10.28□□□□□ -0.76
PDLIM5-217ENST00000512274 C1QL3Q5VWW1 255 aa10.28□□□□□ -0.76
PDLIM5-217ENST00000512274 NEK5Q6P3R8 708 aa10.28□□□□□ -0.76
PDLIM5-217ENST00000512274 LYSMD3Q7Z3D4 306 aa10.28□□□□□ -0.76
PDLIM5-217ENST00000512274 SNX20Q7Z614 316 aa10.28□□□□□ -0.76
PDLIM5-217ENST00000512274 ZSWIM9Q86XI8 627 aa10.28□□□□□ -0.76
PDLIM5-217ENST00000512274 PHACTR4Q8IZ21 702 aa10.28□□□□□ -0.76
PDLIM5-217ENST00000512274 ANKS4BQ8N8V4 417 aa10.28□□□□□ -0.76
PDLIM5-217ENST00000512274 TEX19Q8NA77 164 aa10.28□□□□□ -0.76
PDLIM5-217ENST00000512274 BTN2A2Q8WVV5 523 aa10.28□□□□□ -0.76
PDLIM5-217ENST00000512274 STON2Q8WXE9 905 aa10.28□□□□□ -0.76
PDLIM5-217ENST00000512274 KCNJ9Q92806 393 aa10.28□□□□□ -0.76
PDLIM5-217ENST00000512274 C7orf26Q96N11 449 aa10.28□□□□□ -0.76
PDLIM5-217ENST00000512274 GPR78Q96P69 363 aa10.28□□□□□ -0.76
PDLIM5-217ENST00000512274 FAM111AQ96PZ2 611 aa10.28□□□□□ -0.76
PDLIM5-217ENST00000512274 TTC1Q99614 292 aa10.28□□□□□ -0.76
PDLIM5-217ENST00000512274 AARSD1Q9BTE6 412 aaKnown RBP10.28□□□□□ -0.76
PDLIM5-217ENST00000512274 GPR63Q9BZJ6 419 aa10.28□□□□□ -0.76
PDLIM5-217ENST00000512274 CLPBQ9H078 707 aa10.28□□□□□ -0.76
PDLIM5-217ENST00000512274 GPR27Q9NS67 375 aa10.28□□□□□ -0.76
PDLIM5-217ENST00000512274 PCMTD2Q9NV79 361 aa10.28□□□□□ -0.76
PDLIM5-217ENST00000512274 KCTD5Q9NXV2 234 aa10.28□□□□□ -0.76
PDLIM5-217ENST00000512274 MARCH4Q9P2E8 410 aaPredicted RBP10.28□□□□□ -0.76
PDLIM5-217ENST00000512274 SLC17A7Q9P2U7 560 aa10.28□□□□□ -0.76
PDLIM5-217ENST00000512274 IL36AQ9UHA7 158 aa10.28□□□□□ -0.76
PDLIM5-217ENST00000512274 TLK1Q9UKI8 766 aa10.28□□□□□ -0.76
PDLIM5-217ENST00000512274 EMCNQ9ULC0 261 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 99.7 ms