RNA–Protein interactions for RNA: ENST00000510472.1

HMGXB3-203, Transcript of HMG-box containing 3, humanhuman

TSL 2

Gene HMGXB3, Length 580 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-203ENST00000510472 ELK3P41970 407 aa11.41□□□□□ -0.58
HMGXB3-203ENST00000510472 SLC1A2P43004 574 aa11.41□□□□□ -0.58
HMGXB3-203ENST00000510472 CLCN7P51798 805 aa11.41□□□□□ -0.58
HMGXB3-203ENST00000510472 KPNA2P52292 529 aaKnown RBP11.41□□□□□ -0.58
HMGXB3-203ENST00000510472 MAPK10P53779 464 aa11.41□□□□□ -0.58
HMGXB3-203ENST00000510472 EIF3BP55884 814 aaKnown RBP11.41□□□□□ -0.58
HMGXB3-203ENST00000510472 C2orf54Q08AI8 447 aa11.41□□□□□ -0.58
HMGXB3-203ENST00000510472 PRKG2Q13237 762 aa11.41□□□□□ -0.58
HMGXB3-203ENST00000510472 CLN3Q13286 438 aa11.41□□□□□ -0.58
HMGXB3-203ENST00000510472 CTBP1Q13363 440 aa11.41□□□□□ -0.58
HMGXB3-203ENST00000510472 THOC5Q13769 683 aaKnown RBP11.41□□□□□ -0.58
HMGXB3-203ENST00000510472 FRG1Q14331 258 aaKnown RBP11.41□□□□□ -0.58
HMGXB3-203ENST00000510472 GRB7Q14451 532 aa11.41□□□□□ -0.58
HMGXB3-203ENST00000510472 KRT33BQ14525 404 aa11.41□□□□□ -0.58
HMGXB3-203ENST00000510472 PLCL1Q15111 1095 aa11.41□□□□□ -0.58
HMGXB3-203ENST00000510472 HIF1AQ16665 826 aa11.41□□□□□ -0.58
HMGXB3-203ENST00000510472 BBS9Q3SYG4 887 aa11.41□□□□□ -0.58
HMGXB3-203ENST00000510472 HSP90AA5PQ58FG0 334 aa11.41□□□□□ -0.58
HMGXB3-203ENST00000510472 SPANXN3Q5MJ09 141 aa11.41□□□□□ -0.58
HMGXB3-203ENST00000510472 CACHD1Q5VU97 1274 aa11.41□□□□□ -0.58
HMGXB3-203ENST00000510472 ANKS6Q68DC2 871 aa11.41□□□□□ -0.58
HMGXB3-203ENST00000510472 ZNF470Q6ECI4 717 aa11.41□□□□□ -0.58
HMGXB3-203ENST00000510472 IRGCQ6NXR0 463 aa11.41□□□□□ -0.58
HMGXB3-203ENST00000510472 UNC5AQ6ZN44 842 aa11.41□□□□□ -0.58
HMGXB3-203ENST00000510472 FAM92BQ6ZTR7 304 aa11.41□□□□□ -0.58
HMGXB3-203ENST00000510472 AMIGO1Q86WK6 493 aa11.41□□□□□ -0.58
HMGXB3-203ENST00000510472 OOSP2Q86WS3 158 aa11.41□□□□□ -0.58
HMGXB3-203ENST00000510472 CARFQ8N187 725 aa11.41□□□□□ -0.58
HMGXB3-203ENST00000510472 C2CD4AQ8NCU7 369 aaPredicted RBP11.41□□□□□ -0.58
HMGXB3-203ENST00000510472 CALML6Q8TD86 181 aa11.41□□□□□ -0.58
HMGXB3-203ENST00000510472 HNRNPLLQ8WVV9 542 aaKnown RBP11.41□□□□□ -0.58
HMGXB3-203ENST00000510472 UBXN4Q92575 508 aa11.41□□□□□ -0.58
HMGXB3-203ENST00000510472 C16orf45Q96MC5 204 aaPredicted RBP11.41□□□□□ -0.58
HMGXB3-203ENST00000510472 DCBLD2Q96PD2 775 aa11.41□□□□□ -0.58
HMGXB3-203ENST00000510472 MAP3K3Q99759 626 aa11.41□□□□□ -0.58
HMGXB3-203ENST00000510472 TRIM31Q9BZY9 425 aa11.41□□□□□ -0.58
HMGXB3-203ENST00000510472 SRMSQ9H3Y6 488 aa11.41□□□□□ -0.58
HMGXB3-203ENST00000510472 WHRNQ9P202 907 aa11.41□□□□□ -0.58
HMGXB3-203ENST00000510472 KLHL42Q9P2K6 505 aa11.41□□□□□ -0.58
HMGXB3-203ENST00000510472 POLG2Q9UHN1 485 aa11.41□□□□□ -0.58
HMGXB3-203ENST00000510472 POMT2Q9UKY4 750 aa11.41□□□□□ -0.58
HMGXB3-203ENST00000510472 ICKQ9UPZ9 632 aa11.41□□□□□ -0.58
HMGXB3-203ENST00000510472 VPS9D1Q9Y2B5 631 aa11.41□□□□□ -0.58
HMGXB3-203ENST00000510472 UBA6A0AVT1 1052 aaPredicted RBP11.4□□□□□ -0.58
HMGXB3-203ENST00000510472 TLCD2A6NGC4 264 aa11.4□□□□□ -0.58
HMGXB3-203ENST00000510472 BTN3A1O00481 513 aa11.4□□□□□ -0.58
HMGXB3-203ENST00000510472 EFSO43281 561 aa11.4□□□□□ -0.58
HMGXB3-203ENST00000510472 NIPSNAP2O75323 286 aa11.4□□□□□ -0.58
HMGXB3-203ENST00000510472 HAUS5O94927 633 aa11.4□□□□□ -0.58
HMGXB3-203ENST00000510472 MATN4O95460 622 aa11.4□□□□□ -0.58
HMGXB3-203ENST00000510472 TUBB4AP04350 444 aa11.4□□□□□ -0.58
HMGXB3-203ENST00000510472 ERVK-10P10266 1014 aa11.4□□□□□ -0.58
HMGXB3-203ENST00000510472 POLR2CP19387 275 aaPredicted RBP11.4□□□□□ -0.58
HMGXB3-203ENST00000510472 CD82P27701 267 aa11.4□□□□□ -0.58
HMGXB3-203ENST00000510472 PRDX3P30048 256 aaKnown RBP11.4□□□□□ -0.58
HMGXB3-203ENST00000510472 ATP5DP30049 168 aa11.4□□□□□ -0.58
HMGXB3-203ENST00000510472 CSE1LP55060 971 aaKnown RBP11.4□□□□□ -0.58
HMGXB3-203ENST00000510472 ARL4CP56559 192 aa11.4□□□□□ -0.58
HMGXB3-203ENST00000510472 RAB15P59190 212 aa11.4□□□□□ -0.58
HMGXB3-203ENST00000510472 SH3BP2P78314 561 aa11.4□□□□□ -0.58
HMGXB3-203ENST00000510472 TIAL1Q01085 375 aaKnown RBP eCLIP11.4□□□□□ -0.58
HMGXB3-203ENST00000510472 ABRQ12979 859 aa11.4□□□□□ -0.58
HMGXB3-203ENST00000510472 SYTL3Q4VX76 610 aa11.4□□□□□ -0.58
HMGXB3-203ENST00000510472 HP1BP3Q5SSJ5 553 aaPredicted RBP11.4□□□□□ -0.58
HMGXB3-203ENST00000510472 DCAF12Q5T6F0 453 aa11.4□□□□□ -0.58
HMGXB3-203ENST00000510472 TMEM164Q5U3C3 297 aa11.4□□□□□ -0.58
HMGXB3-203ENST00000510472 CNSTQ6PJW8 725 aa11.4□□□□□ -0.58
HMGXB3-203ENST00000510472 UNC5DQ6UXZ4 953 aa11.4□□□□□ -0.58
HMGXB3-203ENST00000510472 OTOAQ7RTW8 1153 aa11.4□□□□□ -0.58
HMGXB3-203ENST00000510472 GALNT7Q86SF2 657 aa11.4□□□□□ -0.58
HMGXB3-203ENST00000510472 KCNMB4Q86W47 210 aa11.4□□□□□ -0.58
HMGXB3-203ENST00000510472 ZFAND4Q86XD8 727 aa11.4□□□□□ -0.58
HMGXB3-203ENST00000510472 KMT5CQ86Y97 462 aa11.4□□□□□ -0.58
HMGXB3-203ENST00000510472 RASGRP3Q8IV61 690 aa11.4□□□□□ -0.58
HMGXB3-203ENST00000510472 D2HGDHQ8N465 521 aa11.4□□□□□ -0.58
HMGXB3-203ENST00000510472 OTUD6BQ8N6M0 293 aa11.4□□□□□ -0.58
HMGXB3-203ENST00000510472 BBOF1Q8ND07 529 aa11.4□□□□□ -0.58
HMGXB3-203ENST00000510472 FLVCR1-AS1Q8TAF5 88 aa11.4□□□□□ -0.58
HMGXB3-203ENST00000510472 KCNE4Q8WWG9 221 aa11.4□□□□□ -0.58
HMGXB3-203ENST00000510472 NAF1Q96HR8 494 aaKnown RBP11.4□□□□□ -0.58
HMGXB3-203ENST00000510472 PPM1MQ96MI6 270 aa11.4□□□□□ -0.58
HMGXB3-203ENST00000510472 TEFMQ96QE5 360 aaKnown RBP11.4□□□□□ -0.58
HMGXB3-203ENST00000510472 SLC30A3Q99726 388 aa11.4□□□□□ -0.58
HMGXB3-203ENST00000510472 ZPBPQ9BS86 351 aa11.4□□□□□ -0.58
HMGXB3-203ENST00000510472 FAM167BQ9BTA0 163 aa11.4□□□□□ -0.58
HMGXB3-203ENST00000510472 HGH1Q9BTY7 390 aa11.4□□□□□ -0.58
HMGXB3-203ENST00000510472 PITPNM3Q9BZ71 974 aa11.4□□□□□ -0.58
HMGXB3-203ENST00000510472 ASPSCR1Q9BZE9 553 aa11.4□□□□□ -0.58
HMGXB3-203ENST00000510472 TRIT1Q9H3H1 467 aaKnown RBP11.4□□□□□ -0.58
HMGXB3-203ENST00000510472 XKR8Q9H6D3 395 aa11.4□□□□□ -0.58
HMGXB3-203ENST00000510472 APMAPQ9HDC9 416 aa11.4□□□□□ -0.58
HMGXB3-203ENST00000510472 FBXO6Q9NRD1 293 aaPredicted RBP11.4□□□□□ -0.58
HMGXB3-203ENST00000510472 MOCS1Q9NZB8 636 aa11.4□□□□□ -0.58
HMGXB3-203ENST00000510472 OR6C2Q9NZP2 312 aa11.4□□□□□ -0.58
HMGXB3-203ENST00000510472 DSPP15924 2871 aaKnown RBP11.39□□□□□ -0.59
HMGXB3-203ENST00000510472 MATN2O00339 956 aa11.39□□□□□ -0.59
HMGXB3-203ENST00000510472 NDC80O14777 642 aa11.39□□□□□ -0.59
HMGXB3-203ENST00000510472 KLK10O43240 276 aa11.39□□□□□ -0.59
HMGXB3-203ENST00000510472 RASSF9O75901 435 aa11.39□□□□□ -0.59
HMGXB3-203ENST00000510472 C1orf105O95561 183 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms