RNA–Protein interactions for RNA: ENST00000508274.5

RAB28-205, Transcript of RAB28, member RAS oncogene family, humanhuman

TSL 1 (best)

Gene RAB28, Length 1,551 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28-205ENST00000508274 OR6P1Q8NGX9 317 aa13.85□□□□□ -0.19
RAB28-205ENST00000508274 FCRL4Q96PJ5 515 aa13.85□□□□□ -0.19
RAB28-205ENST00000508274 ACTL8Q9H568 366 aa13.85□□□□□ -0.19
RAB28-205ENST00000508274 TFB2MQ9H5Q4 396 aaKnown RBP13.85□□□□□ -0.19
RAB28-205ENST00000508274 ZNF71Q9NQZ8 489 aaPredicted RBP13.85□□□□□ -0.19
RAB28-205ENST00000508274 ASF1AQ9Y294 204 aa13.85□□□□□ -0.19
RAB28-205ENST00000508274 SLC5A10A0PJK1 596 aa13.84□□□□□ -0.19
RAB28-205ENST00000508274 BHMG1C9JSJ3 638 aaPredicted RBP13.84□□□□□ -0.19
RAB28-205ENST00000508274 MATN2O00339 956 aa13.84□□□□□ -0.19
RAB28-205ENST00000508274 SUV39H1O43463 412 aa13.84□□□□□ -0.19
RAB28-205ENST00000508274 CPNE3O75131 537 aaKnown RBP13.84□□□□□ -0.19
RAB28-205ENST00000508274 CREG1O75629 220 aa13.84□□□□□ -0.19
RAB28-205ENST00000508274 GSTM1P09488 218 aa13.84□□□□□ -0.19
RAB28-205ENST00000508274 TPBGLP0DKB5 382 aa13.84□□□□□ -0.19
RAB28-205ENST00000508274 CXCR5P32302 372 aa13.84□□□□□ -0.19
RAB28-205ENST00000508274 KCNJ1P48048 391 aa13.84□□□□□ -0.19
RAB28-205ENST00000508274 SESN2P58004 480 aaPredicted RBP13.84□□□□□ -0.19
RAB28-205ENST00000508274 PRAMEP78395 509 aa13.84□□□□□ -0.19
RAB28-205ENST00000508274 BASP1P80723 227 aaKnown RBP13.84□□□□□ -0.19
RAB28-205ENST00000508274 GSTM4Q03013 218 aa13.84□□□□□ -0.19
RAB28-205ENST00000508274 DRICH1Q6PGQ1 229 aaPredicted RBP13.84□□□□□ -0.19
RAB28-205ENST00000508274 ZNF662Q6ZS27 426 aa13.84□□□□□ -0.19
RAB28-205ENST00000508274 BPHLQ86WA6 291 aaPredicted RBP13.84□□□□□ -0.19
RAB28-205ENST00000508274 OR4L1Q8NH43 312 aa13.84□□□□□ -0.19
RAB28-205ENST00000508274 APOBEC4Q8WW27 367 aaKnown RBP13.84□□□□□ -0.19
RAB28-205ENST00000508274 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.84□□□□□ -0.19
RAB28-205ENST00000508274 PITPNM3Q9BZ71 974 aa13.84□□□□□ -0.19
RAB28-205ENST00000508274 CHRAC1Q9NRG0 131 aa13.84□□□□□ -0.19
RAB28-205ENST00000508274 KCND1Q9NSA2 647 aa13.84□□□□□ -0.19
RAB28-205ENST00000508274 ACTR10Q9NZ32 417 aa13.84□□□□□ -0.19
RAB28-205ENST00000508274 MARCH4Q9P2E8 410 aaPredicted RBP13.84□□□□□ -0.19
RAB28-205ENST00000508274 TUBD1Q9UJT1 453 aa13.84□□□□□ -0.19
RAB28-205ENST00000508274 KCND3Q9UK17 655 aa13.84□□□□□ -0.19
RAB28-205ENST00000508274 PLAGL1Q9UM63 463 aa13.84□□□□□ -0.19
RAB28-205ENST00000508274 PCDHB3Q9Y5E6 796 aa13.84□□□□□ -0.19
RAB28-205ENST00000508274 PCDHGA6Q9Y5G7 932 aa13.84□□□□□ -0.19
RAB28-205ENST00000508274 KCNMB2Q9Y691 235 aa13.84□□□□□ -0.19
RAB28-205ENST00000508274 MYO18BQ8IUG5 2567 aa13.84□□□□□ -0.19
RAB28-205ENST00000508274 ASH1LQ9NR48 2969 aaKnown RBP13.84□□□□□ -0.19
RAB28-205ENST00000508274 CDC14CA4D256 554 aa13.83□□□□□ -0.19
RAB28-205ENST00000508274 IQCF5A8MTL0 148 aa13.83□□□□□ -0.19
RAB28-205ENST00000508274 TMEM150CB9EJG8 249 aa13.83□□□□□ -0.19
RAB28-205ENST00000508274 QSOX1O00391 747 aa13.83□□□□□ -0.19
RAB28-205ENST00000508274 OR56A5P0C7T3 313 aa13.83□□□□□ -0.19
RAB28-205ENST00000508274 CCR7P32248 378 aa13.83□□□□□ -0.19
RAB28-205ENST00000508274 SYTL3Q4VX76 610 aa13.83□□□□□ -0.19
RAB28-205ENST00000508274 ZNF789Q5FWF6 425 aa13.83□□□□□ -0.19
RAB28-205ENST00000508274 TMTC4Q5T4D3 741 aa13.83□□□□□ -0.19
RAB28-205ENST00000508274 LCN10Q6JVE6 187 aa13.83□□□□□ -0.19
RAB28-205ENST00000508274 ATG14Q6ZNE5 492 aa13.83□□□□□ -0.19
RAB28-205ENST00000508274 TRIM73Q86UV7 250 aa13.83□□□□□ -0.19
RAB28-205ENST00000508274 VRK3Q8IV63 474 aa13.83□□□□□ -0.19
RAB28-205ENST00000508274 PPHLN1Q8NEY8 458 aaKnown RBP13.83□□□□□ -0.19
RAB28-205ENST00000508274 OR1L3Q8NH93 324 aa13.83□□□□□ -0.19
RAB28-205ENST00000508274 UBE2Q2Q8WVN8 375 aa13.83□□□□□ -0.19
RAB28-205ENST00000508274 ABHD17AQ96GS6 310 aa13.83□□□□□ -0.19
RAB28-205ENST00000508274 TRAPPC9Q96Q05 1148 aa13.83□□□□□ -0.19
RAB28-205ENST00000508274 TWSG1Q9GZX9 223 aa13.83□□□□□ -0.19
RAB28-205ENST00000508274 RIMKLBQ9ULI2 386 aa13.83□□□□□ -0.19
RAB28-205ENST00000508274 TDRKHQ9Y2W6 561 aaKnown RBP13.83□□□□□ -0.19
RAB28-205ENST00000508274 RELNP78509 3460 aa13.83□□□□□ -0.2
RAB28-205ENST00000508274 SETXQ7Z333 2677 aaKnown RBP13.83□□□□□ -0.2
RAB28-205ENST00000508274 SEC16AO15027 2179 aa13.83□□□□□ -0.2
RAB28-205ENST00000508274 PIPSLA2A3N6 862 aa13.83□□□□□ -0.2
RAB28-205ENST00000508274 C2orf74A8MZ97 194 aa13.83□□□□□ -0.2
RAB28-205ENST00000508274 C21orf140B9A014 251 aa13.83□□□□□ -0.2
RAB28-205ENST00000508274 CEP104O60308 925 aa13.83□□□□□ -0.2
RAB28-205ENST00000508274 NR1D1P20393 614 aa13.83□□□□□ -0.2
RAB28-205ENST00000508274 TERF1P54274 439 aa13.83□□□□□ -0.2
RAB28-205ENST00000508274 LAMB3Q13751 1172 aa13.83□□□□□ -0.2
RAB28-205ENST00000508274 FASTKD1Q53R41 847 aaKnown RBP13.83□□□□□ -0.2
RAB28-205ENST00000508274 LYPLAL1Q5VWZ2 237 aa13.83□□□□□ -0.2
RAB28-205ENST00000508274 UNC5AQ6ZN44 842 aa13.83□□□□□ -0.2
RAB28-205ENST00000508274 GSTA5Q7RTV2 222 aa13.83□□□□□ -0.2
RAB28-205ENST00000508274 KRT222Q8N1A0 295 aa13.83□□□□□ -0.2
RAB28-205ENST00000508274 TRIM58Q8NG06 486 aa13.83□□□□□ -0.2
RAB28-205ENST00000508274 OR8K5Q8NH50 307 aa13.83□□□□□ -0.2
RAB28-205ENST00000508274 OR5K2Q8NHB8 316 aa13.83□□□□□ -0.2
RAB28-205ENST00000508274 MR1Q95460 341 aa13.83□□□□□ -0.2
RAB28-205ENST00000508274 EIF2B3Q9NR50 452 aaKnown RBP13.83□□□□□ -0.2
RAB28-205ENST00000508274 LATS2Q9NRM7 1088 aa13.83□□□□□ -0.2
RAB28-205ENST00000508274 SPHK1Q9NYA1 384 aa13.83□□□□□ -0.2
RAB28-205ENST00000508274 CDYLQ9Y232 598 aa13.83□□□□□ -0.2
RAB28-205ENST00000508274 POLHQ9Y253 713 aa13.83□□□□□ -0.2
RAB28-205ENST00000508274 DRG1Q9Y295 367 aaKnown RBP13.83□□□□□ -0.2
RAB28-205ENST00000508274 COL12A1Q99715 3063 aa13.83□□□□□ -0.2
RAB28-205ENST00000508274 MED13Q9UHV7 2174 aa13.82□□□□□ -0.2
RAB28-205ENST00000508274 TNRC6AQ8NDV7 1962 aaKnown RBP13.82□□□□□ -0.2
RAB28-205ENST00000508274 TCRBV7S3A2A0A539 114 aa13.82□□□□□ -0.2
RAB28-205ENST00000508274 UGT2B7P16662 529 aa13.82□□□□□ -0.2
RAB28-205ENST00000508274 NMBRP28336 390 aa13.82□□□□□ -0.2
RAB28-205ENST00000508274 SHMT2P34897 504 aa13.82□□□□□ -0.2
RAB28-205ENST00000508274 IL10RAQ13651 578 aa13.82□□□□□ -0.2
RAB28-205ENST00000508274 PCID2Q5JVF3 399 aa13.82□□□□□ -0.2
RAB28-205ENST00000508274 COLEC12Q5KU26 742 aa13.82□□□□□ -0.2
RAB28-205ENST00000508274 SPESP1Q6UW49 350 aa13.82□□□□□ -0.2
RAB28-205ENST00000508274 ZNF517Q6ZMY9 492 aaPredicted RBP13.82□□□□□ -0.2
RAB28-205ENST00000508274 CDHR3Q6ZTQ4 885 aa13.82□□□□□ -0.2
RAB28-205ENST00000508274 NLRP9Q7RTR0 991 aa13.82□□□□□ -0.2
RAB28-205ENST00000508274 TBC1D21Q8IYX1 336 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms