RNA–Protein interactions for RNA: ENST00000506154.1

NEDD4-205, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4, Length 6,751 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-205ENST00000506154 CHN1P15882 459 aa2.23□□□□□ -2.05
NEDD4-205ENST00000506154 ITIH1P19827 911 aa2.23□□□□□ -2.05
NEDD4-205ENST00000506154 SLC6A2P23975 617 aa2.23□□□□□ -2.05
NEDD4-205ENST00000506154 PAX6P26367 422 aa2.23□□□□□ -2.05
NEDD4-205ENST00000506154 HOXA9P31269 272 aa2.23□□□□□ -2.05
NEDD4-205ENST00000506154 CASRP41180 1078 aa2.23□□□□□ -2.05
NEDD4-205ENST00000506154 RASSF2P50749 326 aa2.23□□□□□ -2.05
NEDD4-205ENST00000506154 CEBPZQ03701 1054 aaKnown RBP2.23□□□□□ -2.05
NEDD4-205ENST00000506154 LRRC63Q05C16 580 aa2.23□□□□□ -2.05
NEDD4-205ENST00000506154 AWAT1Q58HT5 328 aa2.23□□□□□ -2.05
NEDD4-205ENST00000506154 XKR9Q5GH70 373 aa2.23□□□□□ -2.05
NEDD4-205ENST00000506154 RNFT1Q5M7Z0 435 aa2.23□□□□□ -2.05
NEDD4-205ENST00000506154 Q5PR19 223 aa2.23□□□□□ -2.05
NEDD4-205ENST00000506154 SHC4Q6S5L8 630 aa2.23□□□□□ -2.05
NEDD4-205ENST00000506154 CLEC2AQ6UVW9 174 aa2.23□□□□□ -2.05
NEDD4-205ENST00000506154 PPP1R21Q6ZMI0 780 aa2.23□□□□□ -2.05
NEDD4-205ENST00000506154 FRA10AC1Q70Z53 315 aa2.23□□□□□ -2.05
NEDD4-205ENST00000506154 ANKRD33Q7Z3H0 272 aa2.23□□□□□ -2.05
NEDD4-205ENST00000506154 FJX1Q86VR8 437 aa2.23□□□□□ -2.05
NEDD4-205ENST00000506154 PTOV1Q86YD1 416 aa2.23□□□□□ -2.05
NEDD4-205ENST00000506154 THEM5Q8N1Q8 247 aa2.23□□□□□ -2.05
NEDD4-205ENST00000506154 NANOGP1Q8N7R0 232 aa2.23□□□□□ -2.05
NEDD4-205ENST00000506154 TP53I13Q8NBR0 393 aaPredicted RBP2.23□□□□□ -2.05
NEDD4-205ENST00000506154 NUP43Q8NFH3 380 aa2.23□□□□□ -2.05
NEDD4-205ENST00000506154 OR4D10Q8NGI6 311 aa2.23□□□□□ -2.05
NEDD4-205ENST00000506154 BLOC1S5Q8TDH9 187 aa2.23□□□□□ -2.05
NEDD4-205ENST00000506154 LIPHQ8WWY8 451 aa2.23□□□□□ -2.05
NEDD4-205ENST00000506154 NMD3Q96D46 503 aaKnown RBP2.23□□□□□ -2.05
NEDD4-205ENST00000506154 FCRL4Q96PJ5 515 aa2.23□□□□□ -2.05
NEDD4-205ENST00000506154 POTEKPQ9BYX7 375 aa2.23□□□□□ -2.05
NEDD4-205ENST00000506154 ANKRD60Q9BZ19 345 aa2.23□□□□□ -2.05
NEDD4-205ENST00000506154 ZNF518BQ9C0D4 1074 aa2.23□□□□□ -2.05
NEDD4-205ENST00000506154 ARHGAP39Q9C0H5 1083 aa2.23□□□□□ -2.05
NEDD4-205ENST00000506154 WRAP73Q9P2S5 460 aaPredicted RBP2.23□□□□□ -2.05
NEDD4-205ENST00000506154 OR51B4Q9Y5P0 310 aa2.23□□□□□ -2.05
NEDD4-205ENST00000506154 SESN1Q9Y6P5 492 aa2.23□□□□□ -2.05
NEDD4-205ENST00000506154 PRSS51A0A1B0GVH4 220 aa2.23□□□□□ -2.05
NEDD4-205ENST00000506154 BLOC1S5-TXNDC5H3BN57 136 aa2.23□□□□□ -2.05
NEDD4-205ENST00000506154 ZNF213O14771 459 aa2.23□□□□□ -2.05
NEDD4-205ENST00000506154 MATN3O15232 486 aa2.23□□□□□ -2.05
NEDD4-205ENST00000506154 EFSO43281 561 aa2.23□□□□□ -2.05
NEDD4-205ENST00000506154 PIAS1O75925 651 aa2.23□□□□□ -2.05
NEDD4-205ENST00000506154 TSPAN9O75954 239 aa2.23□□□□□ -2.05
NEDD4-205ENST00000506154 TSPAN12O95859 305 aa2.23□□□□□ -2.05
NEDD4-205ENST00000506154 B3GALT4O96024 378 aa2.23□□□□□ -2.05
NEDD4-205ENST00000506154 ATF2P15336 505 aa2.23□□□□□ -2.05
NEDD4-205ENST00000506154 CD68P34810 354 aaPredicted RBP2.23□□□□□ -2.05
NEDD4-205ENST00000506154 CRHR1P34998 444 aa2.23□□□□□ -2.05
NEDD4-205ENST00000506154 PTGS2P35354 604 aa2.23□□□□□ -2.05
NEDD4-205ENST00000506154 SREBF1P36956 1147 aa2.23□□□□□ -2.05
NEDD4-205ENST00000506154 HNF4AP41235 474 aa2.23□□□□□ -2.05
NEDD4-205ENST00000506154 PPP1R2P41236 205 aa2.23□□□□□ -2.05
NEDD4-205ENST00000506154 CLCNKAP51800 687 aa2.23□□□□□ -2.05
NEDD4-205ENST00000506154 LBX1P52954 281 aa2.23□□□□□ -2.05
NEDD4-205ENST00000506154 BCAT1P54687 386 aa2.23□□□□□ -2.05
NEDD4-205ENST00000506154 NME5P56597 212 aa2.23□□□□□ -2.05
NEDD4-205ENST00000506154 MRPS9P82933 396 aaKnown RBP2.23□□□□□ -2.05
NEDD4-205ENST00000506154 FLI1Q01543 452 aaPredicted RBP2.23□□□□□ -2.05
NEDD4-205ENST00000506154 IL1RL1Q01638 556 aa2.23□□□□□ -2.05
NEDD4-205ENST00000506154 BNIP3Q12983 259 aa2.23□□□□□ -2.05
NEDD4-205ENST00000506154 GPR33Q49SQ1 333 aa2.23□□□□□ -2.05
NEDD4-205ENST00000506154 FAM98BQ52LJ0 330 aaKnown RBP2.23□□□□□ -2.05
NEDD4-205ENST00000506154 TDRD12Q587J7 1177 aaKnown RBP2.23□□□□□ -2.05
NEDD4-205ENST00000506154 KRT40Q6A162 431 aa2.23□□□□□ -2.05
NEDD4-205ENST00000506154 PPP1R2P3Q6NXS1 205 aa2.23□□□□□ -2.05
NEDD4-205ENST00000506154 DHDDSQ86SQ9 333 aa2.23□□□□□ -2.05
NEDD4-205ENST00000506154 NT5DC3Q86UY8 548 aa2.23□□□□□ -2.05
NEDD4-205ENST00000506154 DAW1Q8N136 415 aa2.23□□□□□ -2.05
NEDD4-205ENST00000506154 OR5H6Q8NGV6 325 aa2.23□□□□□ -2.05
NEDD4-205ENST00000506154 SLC13A3Q8WWT9 602 aa2.23□□□□□ -2.05
NEDD4-205ENST00000506154 FIG4Q92562 907 aa2.23□□□□□ -2.05
NEDD4-205ENST00000506154 HDAC2Q92769 488 aaKnown RBP2.23□□□□□ -2.05
NEDD4-205ENST00000506154 SLCO2A1Q92959 643 aa2.23□□□□□ -2.05
NEDD4-205ENST00000506154 GLIS2Q9BZE0 524 aaPredicted RBP2.23□□□□□ -2.05
NEDD4-205ENST00000506154 NRSN2Q9GZP1 204 aa2.23□□□□□ -2.05
NEDD4-205ENST00000506154 SH2D4AQ9H788 454 aa2.23□□□□□ -2.05
NEDD4-205ENST00000506154 MINDY3Q9H8M7 445 aa2.23□□□□□ -2.05
NEDD4-205ENST00000506154 PLEKHA2Q9HB19 425 aa2.23□□□□□ -2.05
NEDD4-205ENST00000506154 HPS4Q9NQG7 708 aa2.23□□□□□ -2.05
NEDD4-205ENST00000506154 ANKEF1Q9NU02 776 aa2.23□□□□□ -2.05
NEDD4-205ENST00000506154 TDP1Q9NUW8 608 aa2.23□□□□□ -2.05
NEDD4-205ENST00000506154 TMEM184CQ9NVA4 438 aa2.23□□□□□ -2.05
NEDD4-205ENST00000506154 GRHL1Q9NZI5 618 aa2.23□□□□□ -2.05
NEDD4-205ENST00000506154 EMC3Q9P0I2 261 aa2.23□□□□□ -2.05
NEDD4-205ENST00000506154 KLHL14Q9P2G3 628 aa2.23□□□□□ -2.05
NEDD4-205ENST00000506154 GPR160Q9UJ42 338 aa2.23□□□□□ -2.05
NEDD4-205ENST00000506154 ACTL7AQ9Y615 435 aa2.23□□□□□ -2.05
NEDD4-205ENST00000506154 ADGRA3Q8IWK6 1321 aa2.23□□□□□ -2.05
NEDD4-205ENST00000506154 DENND4CQ5VZ89 1909 aa2.23□□□□□ -2.05
NEDD4-205ENST00000506154 A0A0G2JPF8 293 aa2.23□□□□□ -2.05
NEDD4-205ENST00000506154 BCLAF3A2AJT9 711 aaKnown RBP2.23□□□□□ -2.05
NEDD4-205ENST00000506154 HNRNPCL3B7ZW38 293 aa2.23□□□□□ -2.05
NEDD4-205ENST00000506154 H3BNH8 94 aa2.23□□□□□ -2.05
NEDD4-205ENST00000506154 I6L893 689 aaPredicted RBP2.23□□□□□ -2.05
NEDD4-205ENST00000506154 KIAA0355O15063 1070 aa2.23□□□□□ -2.05
NEDD4-205ENST00000506154 SMAD6O43541 496 aaKnown RBP2.23□□□□□ -2.05
NEDD4-205ENST00000506154 ZNF780AO75290 641 aaPredicted RBP2.23□□□□□ -2.05
NEDD4-205ENST00000506154 SPAG6O75602 509 aa2.23□□□□□ -2.05
NEDD4-205ENST00000506154 HNRNPCL4P0DMR1 293 aa2.23□□□□□ -2.05
NEDD4-205ENST00000506154 CSF2RAP15509 400 aa2.23□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms