RNA–Protein interactions for RNA: ENST00000503401.1

SCLT1-205, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene SCLT1, Length 1,604 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-205ENST00000503401 GPLD1P80108 840 aa16.05■□□□□ 0.16
SCLT1-205ENST00000503401 SLMAPQ14BN4 828 aa16.05■□□□□ 0.16
SCLT1-205ENST00000503401 KLHL38Q2WGJ6 581 aa16.05■□□□□ 0.16
SCLT1-205ENST00000503401 ZNF574Q6ZN55 896 aaPredicted RBP16.05■□□□□ 0.16
SCLT1-205ENST00000503401 GALNT15Q8N3T1 639 aa16.05■□□□□ 0.16
SCLT1-205ENST00000503401 OR52E1Q8NGJ3 308 aa16.05■□□□□ 0.16
SCLT1-205ENST00000503401 OR5K2Q8NHB8 316 aa16.05■□□□□ 0.16
SCLT1-205ENST00000503401 INPP5DQ92835 1189 aa16.05■□□□□ 0.16
SCLT1-205ENST00000503401 VPS39Q96JC1 886 aa16.05■□□□□ 0.16
SCLT1-205ENST00000503401 CPNE1Q99829 537 aa16.05■□□□□ 0.16
SCLT1-205ENST00000503401 TRIT1Q9H3H1 467 aaKnown RBP16.05■□□□□ 0.16
SCLT1-205ENST00000503401 SEMA6CQ9H3T2 930 aa16.05■□□□□ 0.16
SCLT1-205ENST00000503401 RHOJQ9H4E5 214 aa16.05■□□□□ 0.16
SCLT1-205ENST00000503401 MVB12BQ9H7P6 319 aa16.05■□□□□ 0.16
SCLT1-205ENST00000503401 CELSR3Q9NYQ7 3312 aa16.05■□□□□ 0.16
SCLT1-205ENST00000503401 PROS1P07225 676 aa16.05■□□□□ 0.16
SCLT1-205ENST00000503401 FDXRP22570 491 aa16.05■□□□□ 0.16
SCLT1-205ENST00000503401 NDUFS1P28331 727 aa16.05■□□□□ 0.16
SCLT1-205ENST00000503401 PHBP35232 272 aa16.05■□□□□ 0.16
SCLT1-205ENST00000503401 GP5P40197 560 aa16.05■□□□□ 0.16
SCLT1-205ENST00000503401 BDKRB1P46663 353 aa16.05■□□□□ 0.16
SCLT1-205ENST00000503401 PPP1CAP62136 330 aa16.05■□□□□ 0.16
SCLT1-205ENST00000503401 VSNL1P62760 191 aa16.05■□□□□ 0.16
SCLT1-205ENST00000503401 ZNF460Q14592 562 aa16.05■□□□□ 0.16
SCLT1-205ENST00000503401 ERCC6LQ2NKX8 1250 aa16.05■□□□□ 0.16
SCLT1-205ENST00000503401 TTLL9Q3SXZ7 439 aa16.05■□□□□ 0.16
SCLT1-205ENST00000503401 FAM45BPQ6NSW5 357 aa16.05■□□□□ 0.16
SCLT1-205ENST00000503401 PAQR3Q6TCH7 311 aa16.05■□□□□ 0.16
SCLT1-205ENST00000503401 DCBLD1Q8N8Z6 715 aa16.05■□□□□ 0.16
SCLT1-205ENST00000503401 OR4E2Q8NGC2 313 aa16.05■□□□□ 0.16
SCLT1-205ENST00000503401 WDR48Q8TAF3 677 aa16.05■□□□□ 0.16
SCLT1-205ENST00000503401 FAM45AQ8TCE6 357 aa16.05■□□□□ 0.16
SCLT1-205ENST00000503401 UBXN4Q92575 508 aa16.05■□□□□ 0.16
SCLT1-205ENST00000503401 XKR8Q9H6D3 395 aa16.05■□□□□ 0.16
SCLT1-205ENST00000503401 KLHL3Q9UH77 587 aa16.05■□□□□ 0.16
SCLT1-205ENST00000503401 CORO1CQ9ULV4 474 aaPredicted RBP16.05■□□□□ 0.16
SCLT1-205ENST00000503401 MTO1Q9Y2Z2 717 aaKnown RBP16.05■□□□□ 0.16
SCLT1-205ENST00000503401 TPBGLP0DKB5 382 aa16.04■□□□□ 0.16
SCLT1-205ENST00000503401 TNFRSF8P28908 595 aa16.04■□□□□ 0.16
SCLT1-205ENST00000503401 PMS2P54278 862 aa16.04■□□□□ 0.16
SCLT1-205ENST00000503401 GFERP55789 205 aa16.04■□□□□ 0.16
SCLT1-205ENST00000503401 PDAP1Q13442 181 aaKnown RBP16.04■□□□□ 0.16
SCLT1-205ENST00000503401 ISXQ2M1V0 245 aa16.04■□□□□ 0.16
SCLT1-205ENST00000503401 SNAP47Q5SQN1 464 aa16.04■□□□□ 0.16
SCLT1-205ENST00000503401 UGT3A1Q6NUS8 523 aa16.04■□□□□ 0.16
SCLT1-205ENST00000503401 PIWIL4Q7Z3Z4 852 aaKnown RBP16.04■□□□□ 0.16
SCLT1-205ENST00000503401 TBC1D21Q8IYX1 336 aa16.04■□□□□ 0.16
SCLT1-205ENST00000503401 RCBTB1Q8NDN9 531 aa16.04■□□□□ 0.16
SCLT1-205ENST00000503401 LCN9Q8WX39 176 aa16.04■□□□□ 0.16
SCLT1-205ENST00000503401 DEPDC7Q96QD5 511 aa16.04■□□□□ 0.16
SCLT1-205ENST00000503401 RBBP8Q99708 897 aa16.04■□□□□ 0.16
SCLT1-205ENST00000503401 TXLNGYQ9BZA5 131 aa16.04■□□□□ 0.16
SCLT1-205ENST00000503401 CAB39LQ9H9S4 337 aa16.04■□□□□ 0.16
SCLT1-205ENST00000503401 ENTPD2Q9Y5L3 495 aa16.04■□□□□ 0.16
SCLT1-205ENST00000503401 OR6C74A6NCV1 312 aa16.03■□□□□ 0.16
SCLT1-205ENST00000503401 CAPZBP47756 277 aa16.03■□□□□ 0.16
SCLT1-205ENST00000503401 TAS2R39P59534 338 aa16.03■□□□□ 0.16
SCLT1-205ENST00000503401 UAP1Q16222 522 aaPredicted RBP16.03■□□□□ 0.16
SCLT1-205ENST00000503401 CCSMST1Q4G0I0 132 aa16.03■□□□□ 0.16
SCLT1-205ENST00000503401 PHF19Q5T6S3 580 aa16.03■□□□□ 0.16
SCLT1-205ENST00000503401 UNC5DQ6UXZ4 953 aa16.03■□□□□ 0.16
SCLT1-205ENST00000503401 CCNI2Q6ZMN8 369 aaPredicted RBP16.03■□□□□ 0.16
SCLT1-205ENST00000503401 CEP97Q8IW35 865 aa16.03■□□□□ 0.16
SCLT1-205ENST00000503401 SLITRK4Q8IW52 837 aa16.03■□□□□ 0.16
SCLT1-205ENST00000503401 LMNTD1Q8N9Z9 388 aa16.03■□□□□ 0.16
SCLT1-205ENST00000503401 EEF1AKMT1Q8WVE0 214 aa16.03■□□□□ 0.16
SCLT1-205ENST00000503401 ZFPM2Q8WW38 1151 aa16.03■□□□□ 0.16
SCLT1-205ENST00000503401 TGM7Q96PF1 710 aa16.03■□□□□ 0.16
SCLT1-205ENST00000503401 CYTH2Q99418 400 aa16.03■□□□□ 0.16
SCLT1-205ENST00000503401 ACSS3Q9H6R3 686 aa16.03■□□□□ 0.16
SCLT1-205ENST00000503401 KLHL42Q9P2K6 505 aa16.03■□□□□ 0.16
SCLT1-205ENST00000503401 SLC39A10Q9ULF5 831 aa16.03■□□□□ 0.16
SCLT1-205ENST00000503401 ICKQ9UPZ9 632 aa16.03■□□□□ 0.16
SCLT1-205ENST00000503401 SNRNP200O75643 2136 aaKnown RBP16.03■□□□□ 0.16
SCLT1-205ENST00000503401 IGHV5-10-1A0A0J9YXX1 117 aa16.02■□□□□ 0.16
SCLT1-205ENST00000503401 A8MU76 341 aa16.02■□□□□ 0.16
SCLT1-205ENST00000503401 MATN4O95460 622 aa16.02■□□□□ 0.16
SCLT1-205ENST00000503401 ATP5DP30049 168 aa16.02■□□□□ 0.16
SCLT1-205ENST00000503401 SKIV2L2P42285 1042 aaKnown RBP16.02■□□□□ 0.16
SCLT1-205ENST00000503401 NAA30Q147X3 362 aaPredicted RBP16.02■□□□□ 0.16
SCLT1-205ENST00000503401 IRGCQ6NXR0 463 aa16.02■□□□□ 0.16
SCLT1-205ENST00000503401 TMEM207Q6UWW9 146 aa16.02■□□□□ 0.16
SCLT1-205ENST00000503401 CYHR1Q6ZMK1 362 aa16.02■□□□□ 0.16
SCLT1-205ENST00000503401 EIF1ADQ8N9N8 165 aaKnown RBP16.02■□□□□ 0.16
SCLT1-205ENST00000503401 LINGO1Q96FE5 620 aa16.02■□□□□ 0.16
SCLT1-205ENST00000503401 CCDC74BQ96LY2 380 aa16.02■□□□□ 0.16
SCLT1-205ENST00000503401 FOPNLQ96NB1 174 aa16.02■□□□□ 0.16
SCLT1-205ENST00000503401 FUT8Q9BYC5 575 aa16.02■□□□□ 0.16
SCLT1-205ENST00000503401 SRMSQ9H3Y6 488 aa16.02■□□□□ 0.16
SCLT1-205ENST00000503401 HRASLS2Q9NWW9 162 aa16.02■□□□□ 0.16
SCLT1-205ENST00000503401 PMS2P1A4D2B8 440 aa16.01■□□□□ 0.15
SCLT1-205ENST00000503401 CAPN5O15484 640 aaPredicted RBP16.01■□□□□ 0.15
SCLT1-205ENST00000503401 RIPK2O43353 540 aa16.01■□□□□ 0.15
SCLT1-205ENST00000503401 C1orf105O95561 183 aa16.01■□□□□ 0.15
SCLT1-205ENST00000503401 POLR2CP19387 275 aaPredicted RBP16.01■□□□□ 0.15
SCLT1-205ENST00000503401 LIMK2P53671 638 aa16.01■□□□□ 0.15
SCLT1-205ENST00000503401 INHBCP55103 352 aa16.01■□□□□ 0.15
SCLT1-205ENST00000503401 TUBB4BP68371 445 aa16.01■□□□□ 0.15
SCLT1-205ENST00000503401 ZFP36L1Q07352 338 aaKnown RBP16.01■□□□□ 0.15
SCLT1-205ENST00000503401 SQSTM1Q13501 440 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 79 ms