RNA–Protein interactions for RNA: ENST00000497978.1

NUDCD3-211, Transcript of NudC domain containing 3, humanhuman

TSL 4

Gene NUDCD3, Length 659 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-211ENST00000497978 HGH1Q9BTY7 390 aa11.41□□□□□ -0.58
NUDCD3-211ENST00000497978 RBSNQ9H1K0 784 aa11.41□□□□□ -0.58
NUDCD3-211ENST00000497978 CHST8Q9H2A9 424 aa11.41□□□□□ -0.58
NUDCD3-211ENST00000497978 ACSS2Q9NR19 701 aa11.41□□□□□ -0.58
NUDCD3-211ENST00000497978 PACSIN2Q9UNF0 486 aaPredicted RBP11.41□□□□□ -0.58
NUDCD3-211ENST00000497978 SNX7Q9UNH6 387 aa11.41□□□□□ -0.58
NUDCD3-211ENST00000497978 VPS9D1Q9Y2B5 631 aa11.41□□□□□ -0.58
NUDCD3-211ENST00000497978 ERI2A8K979 691 aaKnown RBP11.4□□□□□ -0.58
NUDCD3-211ENST00000497978 K7EM74 188 aa11.4□□□□□ -0.58
NUDCD3-211ENST00000497978 BTN3A3O00478 584 aa11.4□□□□□ -0.58
NUDCD3-211ENST00000497978 DDX3YO15523 660 aaKnown RBP11.4□□□□□ -0.58
NUDCD3-211ENST00000497978 KDM1AO60341 852 aa11.4□□□□□ -0.58
NUDCD3-211ENST00000497978 HBQ1P09105 142 aa11.4□□□□□ -0.58
NUDCD3-211ENST00000497978 MSL3P1P0C860 447 aa11.4□□□□□ -0.58
NUDCD3-211ENST00000497978 PRSS56P0CW18 603 aa11.4□□□□□ -0.58
NUDCD3-211ENST00000497978 ST6GAL1P15907 406 aa11.4□□□□□ -0.58
NUDCD3-211ENST00000497978 MSNP26038 577 aaKnown RBP11.4□□□□□ -0.58
NUDCD3-211ENST00000497978 STIP1P31948 543 aaKnown RBP11.4□□□□□ -0.58
NUDCD3-211ENST00000497978 SHMT2P34897 504 aa11.4□□□□□ -0.58
NUDCD3-211ENST00000497978 LMAN1P49257 510 aa11.4□□□□□ -0.58
NUDCD3-211ENST00000497978 PGDP52209 483 aa11.4□□□□□ -0.58
NUDCD3-211ENST00000497978 ITGA1P56199 1179 aa11.4□□□□□ -0.58
NUDCD3-211ENST00000497978 PLOD1Q02809 727 aaPredicted RBP11.4□□□□□ -0.58
NUDCD3-211ENST00000497978 PRKG2Q13237 762 aa11.4□□□□□ -0.58
NUDCD3-211ENST00000497978 KLF1Q13351 362 aaPredicted RBP11.4□□□□□ -0.58
NUDCD3-211ENST00000497978 DBN1Q16643 649 aa11.4□□□□□ -0.58
NUDCD3-211ENST00000497978 ZNF658BQ4V348 819 aaPredicted RBP11.4□□□□□ -0.58
NUDCD3-211ENST00000497978 SYTL3Q4VX76 610 aa11.4□□□□□ -0.58
NUDCD3-211ENST00000497978 PLEKHS1Q5SXH7 462 aa11.4□□□□□ -0.58
NUDCD3-211ENST00000497978 LYPLAL1Q5VWZ2 237 aa11.4□□□□□ -0.58
NUDCD3-211ENST00000497978 PIANPQ8IYJ0 282 aa11.4□□□□□ -0.58
NUDCD3-211ENST00000497978 GPR135Q8IZ08 494 aa11.4□□□□□ -0.58
NUDCD3-211ENST00000497978 TAB3Q8N5C8 712 aaPredicted RBP11.4□□□□□ -0.58
NUDCD3-211ENST00000497978 ENDOVQ8N8Q3 282 aaKnown RBP11.4□□□□□ -0.58
NUDCD3-211ENST00000497978 DNAAF3Q8N9W5 541 aa11.4□□□□□ -0.58
NUDCD3-211ENST00000497978 SLC38A9Q8NBW4 561 aa11.4□□□□□ -0.58
NUDCD3-211ENST00000497978 OR1L3Q8NH93 324 aa11.4□□□□□ -0.58
NUDCD3-211ENST00000497978 SLC35B2Q8TB61 432 aa11.4□□□□□ -0.58
NUDCD3-211ENST00000497978 ELMO1Q92556 727 aa11.4□□□□□ -0.58
NUDCD3-211ENST00000497978 COL26A1Q96A83 441 aa11.4□□□□□ -0.58
NUDCD3-211ENST00000497978 DPH2Q9BQC3 489 aaPredicted RBP11.4□□□□□ -0.58
NUDCD3-211ENST00000497978 SLC25A23Q9BV35 468 aa11.4□□□□□ -0.58
NUDCD3-211ENST00000497978 NLNQ9BYT8 704 aa11.4□□□□□ -0.58
NUDCD3-211ENST00000497978 PITPNM3Q9BZ71 974 aa11.4□□□□□ -0.58
NUDCD3-211ENST00000497978 XKR8Q9H6D3 395 aa11.4□□□□□ -0.58
NUDCD3-211ENST00000497978 ACTR5Q9H9F9 607 aaPredicted RBP11.4□□□□□ -0.58
NUDCD3-211ENST00000497978 PIH1D1Q9NWS0 290 aaKnown RBP11.4□□□□□ -0.58
NUDCD3-211ENST00000497978 ACTR10Q9NZ32 417 aa11.4□□□□□ -0.58
NUDCD3-211ENST00000497978 POLG2Q9UHN1 485 aa11.4□□□□□ -0.58
NUDCD3-211ENST00000497978 G3BP2Q9UN86 482 aaKnown RBP11.4□□□□□ -0.58
NUDCD3-211ENST00000497978 ASF1AQ9Y294 204 aa11.4□□□□□ -0.58
NUDCD3-211ENST00000497978 R3HDM2Q9Y2K5 976 aaKnown RBP11.4□□□□□ -0.58
NUDCD3-211ENST00000497978 PIKFYVEQ9Y2I7 2098 aa11.39□□□□□ -0.59
NUDCD3-211ENST00000497978 CCDC78A2IDD5 438 aa11.39□□□□□ -0.59
NUDCD3-211ENST00000497978 HEATR9A2RTY3 570 aa11.39□□□□□ -0.59
NUDCD3-211ENST00000497978 MROH6A6NGR9 719 aa11.39□□□□□ -0.59
NUDCD3-211ENST00000497978 ARGFXA6NJG6 315 aa11.39□□□□□ -0.59
NUDCD3-211ENST00000497978 C9J4A7 227 aa11.39□□□□□ -0.59
NUDCD3-211ENST00000497978 E7EQ34 232 aa11.39□□□□□ -0.59
NUDCD3-211ENST00000497978 E7EVH7 732 aa11.39□□□□□ -0.59
NUDCD3-211ENST00000497978 DNAJB5O75953 348 aa11.39□□□□□ -0.59
NUDCD3-211ENST00000497978 OR56A5P0C7T3 313 aa11.39□□□□□ -0.59
NUDCD3-211ENST00000497978 AGXTP21549 392 aa11.39□□□□□ -0.59
NUDCD3-211ENST00000497978 CCL11P51671 97 aa11.39□□□□□ -0.59
NUDCD3-211ENST00000497978 GDF10P55107 478 aa11.39□□□□□ -0.59
NUDCD3-211ENST00000497978 CDH17Q12864 832 aa11.39□□□□□ -0.59
NUDCD3-211ENST00000497978 ABRQ12979 859 aa11.39□□□□□ -0.59
NUDCD3-211ENST00000497978 IL10RAQ13651 578 aa11.39□□□□□ -0.59
NUDCD3-211ENST00000497978 UBAP2LQ14157 1087 aaKnown RBP11.39□□□□□ -0.59
NUDCD3-211ENST00000497978 SEL1L2Q5TEA6 688 aa11.39□□□□□ -0.59
NUDCD3-211ENST00000497978 PRAMEF17Q5VTA0 474 aa11.39□□□□□ -0.59
NUDCD3-211ENST00000497978 SPESP1Q6UW49 350 aa11.39□□□□□ -0.59
NUDCD3-211ENST00000497978 PACS1Q6VY07 963 aa11.39□□□□□ -0.59
NUDCD3-211ENST00000497978 PPP1R21Q6ZMI0 780 aa11.39□□□□□ -0.59
NUDCD3-211ENST00000497978 SYTL1Q8IYJ3 562 aa11.39□□□□□ -0.59
NUDCD3-211ENST00000497978 TBC1D21Q8IYX1 336 aa11.39□□□□□ -0.59
NUDCD3-211ENST00000497978 ADGRF3Q8IZF5 1079 aa11.39□□□□□ -0.59
NUDCD3-211ENST00000497978 HES6Q96HZ4 224 aa11.39□□□□□ -0.59
NUDCD3-211ENST00000497978 TRAPPC9Q96Q05 1148 aa11.39□□□□□ -0.59
NUDCD3-211ENST00000497978 TRIM55Q9BYV6 548 aa11.39□□□□□ -0.59
NUDCD3-211ENST00000497978 FRMD8P1Q9BZ68 369 aaPredicted RBP11.39□□□□□ -0.59
NUDCD3-211ENST00000497978 KLHL25Q9H0H3 589 aa11.39□□□□□ -0.59
NUDCD3-211ENST00000497978 ING2Q9H160 280 aa11.39□□□□□ -0.59
NUDCD3-211ENST00000497978 TCFL5Q9UL49 500 aa11.39□□□□□ -0.59
NUDCD3-211ENST00000497978 PLAAQ9Y263 795 aa11.39□□□□□ -0.59
NUDCD3-211ENST00000497978 PCDHGA9Q9Y5G4 932 aaKnown RBP11.39□□□□□ -0.59
NUDCD3-211ENST00000497978 CCDC162PA2VCL2 907 aa11.38□□□□□ -0.59
NUDCD3-211ENST00000497978 TTLL8A6PVC2 850 aa11.38□□□□□ -0.59
NUDCD3-211ENST00000497978 PVRP15151 417 aa11.38□□□□□ -0.59
NUDCD3-211ENST00000497978 PSMA3P25788 255 aa11.38□□□□□ -0.59
NUDCD3-211ENST00000497978 RORAP35398 523 aa11.38□□□□□ -0.59
NUDCD3-211ENST00000497978 PPARGP37231 505 aaPredicted RBP11.38□□□□□ -0.59
NUDCD3-211ENST00000497978 FDFT1P37268 417 aa11.38□□□□□ -0.59
NUDCD3-211ENST00000497978 LSM11P83369 360 aaKnown RBP eCLIP11.38□□□□□ -0.59
NUDCD3-211ENST00000497978 CHAF1BQ13112 559 aa11.38□□□□□ -0.59
NUDCD3-211ENST00000497978 BRD3Q15059 726 aa11.38□□□□□ -0.59
NUDCD3-211ENST00000497978 CCDC38Q502W7 563 aa11.38□□□□□ -0.59
NUDCD3-211ENST00000497978 CPZQ66K79 652 aa11.38□□□□□ -0.59
NUDCD3-211ENST00000497978 LCN10Q6JVE6 187 aa11.38□□□□□ -0.59
NUDCD3-211ENST00000497978 AFTPHQ6ULP2 937 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms