RNA–Protein interactions for RNA: ENST00000496852.5

ATPAF2-208, Transcript of ATP synthase mitochondrial F1 complex assembly factor 2, human

TSL 2

Gene ATPAF2, Length 1,662 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATPAF2-208	ENST00000496852	HAL	P42357	657 aa		13.62	□□□□□ -0.23
ATPAF2-208	ENST00000496852	MAPK9	P45984	424 aa		13.62	□□□□□ -0.23
ATPAF2-208	ENST00000496852	GLRB	P48167	497 aa		13.62	□□□□□ -0.23
ATPAF2-208	ENST00000496852	SPEM2	Q0P670	501 aa		13.62	□□□□□ -0.23
ATPAF2-208	ENST00000496852	TSN	Q15631	228 aa	Known RBP	13.62	□□□□□ -0.23
ATPAF2-208	ENST00000496852	TECRL	Q5HYJ1	363 aa		13.62	□□□□□ -0.23
ATPAF2-208	ENST00000496852	IYD	Q6PHW0	289 aa		13.62	□□□□□ -0.23
ATPAF2-208	ENST00000496852	TMEM151A	Q8N4L1	468 aa		13.62	□□□□□ -0.23
ATPAF2-208	ENST00000496852	MINDY1	Q8N5J2	469 aa		13.62	□□□□□ -0.23
ATPAF2-208	ENST00000496852	FAM46D	Q8NEK8	389 aa		13.62	□□□□□ -0.23
ATPAF2-208	ENST00000496852	TCP10L	Q8TDR4	215 aa		13.62	□□□□□ -0.23
ATPAF2-208	ENST00000496852	SKA2	Q8WVK7	121 aa	Predicted RBP	13.62	□□□□□ -0.23
ATPAF2-208	ENST00000496852	DYDC1	Q8WWB3	177 aa		13.62	□□□□□ -0.23
ATPAF2-208	ENST00000496852	TFG	Q92734	400 aa	Predicted RBP	13.62	□□□□□ -0.23
ATPAF2-208	ENST00000496852	DLG3	Q92796	817 aa		13.62	□□□□□ -0.23
ATPAF2-208	ENST00000496852	C12orf66	Q96MD2	445 aa		13.62	□□□□□ -0.23
ATPAF2-208	ENST00000496852	GTPBP2	Q9BX10	602 aa	Known RBP	13.62	□□□□□ -0.23
ATPAF2-208	ENST00000496852	C12orf65	Q9H3J6	166 aa	Known RBP	13.62	□□□□□ -0.23
ATPAF2-208	ENST00000496852	ZNF624	Q9P2J8	865 aa	Predicted RBP	13.62	□□□□□ -0.23
ATPAF2-208	ENST00000496852	EMCN	Q9ULC0	261 aa		13.62	□□□□□ -0.23
ATPAF2-208	ENST00000496852	GRID1	Q9ULK0	1009 aa		13.62	□□□□□ -0.23
ATPAF2-208	ENST00000496852	DOLK	Q9UPQ8	538 aa		13.62	□□□□□ -0.23
ATPAF2-208	ENST00000496852	HCN4	Q9Y3Q4	1203 aa		13.62	□□□□□ -0.23
ATPAF2-208	ENST00000496852	CFAP20	Q9Y6A4	193 aa	Known RBP	13.62	□□□□□ -0.23
ATPAF2-208	ENST00000496852	CCDC189	A1A4V9	331 aa		13.61	□□□□□ -0.23
ATPAF2-208	ENST00000496852	NEMP2	A6NFY4	417 aa		13.61	□□□□□ -0.23
ATPAF2-208	ENST00000496852	OR5K4	A6NMS3	321 aa		13.61	□□□□□ -0.23
ATPAF2-208	ENST00000496852	OR52A4P	A6NMU1	304 aa		13.61	□□□□□ -0.23
ATPAF2-208	ENST00000496852	SLC16A5	O15375	505 aa		13.61	□□□□□ -0.23
ATPAF2-208	ENST00000496852	LRP3	O75074	770 aa		13.61	□□□□□ -0.23
ATPAF2-208	ENST00000496852	C8G	P07360	202 aa		13.61	□□□□□ -0.23
ATPAF2-208	ENST00000496852	MTHFD1	P11586	935 aa	Known RBP	13.61	□□□□□ -0.23
ATPAF2-208	ENST00000496852	CHN1	P15882	459 aa		13.61	□□□□□ -0.23
ATPAF2-208	ENST00000496852	KCNC1	P48547	511 aa		13.61	□□□□□ -0.23
ATPAF2-208	ENST00000496852	SP140	Q13342	867 aa		13.61	□□□□□ -0.23
ATPAF2-208	ENST00000496852	SF3A2	Q15428	464 aa	Known RBP	13.61	□□□□□ -0.23
ATPAF2-208	ENST00000496852	OR4D1	Q15615	310 aa		13.61	□□□□□ -0.23
ATPAF2-208	ENST00000496852	RPE65	Q16518	533 aa		13.61	□□□□□ -0.23
ATPAF2-208	ENST00000496852	PPP1R3A	Q16821	1122 aa		13.61	□□□□□ -0.23
ATPAF2-208	ENST00000496852	DEFB133	Q30KQ1	61 aa		13.61	□□□□□ -0.23
ATPAF2-208	ENST00000496852	N4BP2L1	Q5TBK1	243 aa	Predicted RBP	13.61	□□□□□ -0.23
ATPAF2-208	ENST00000496852	DUS1L	Q6P1R4	473 aa	Known RBP	13.61	□□□□□ -0.23
ATPAF2-208	ENST00000496852	C16orf46	Q6P387	395 aa		13.61	□□□□□ -0.23
ATPAF2-208	ENST00000496852	KLC3	Q6P597	504 aa		13.61	□□□□□ -0.23
ATPAF2-208	ENST00000496852	UBE2R2	Q712K3	238 aa	Predicted RBP	13.61	□□□□□ -0.23
ATPAF2-208	ENST00000496852	ADAMTSL2	Q86TH1	951 aa		13.61	□□□□□ -0.23
ATPAF2-208	ENST00000496852	GATAD2A	Q86YP4	633 aa		13.61	□□□□□ -0.23
ATPAF2-208	ENST00000496852	SFTPA2	Q8IWL1	248 aa		13.61	□□□□□ -0.23
ATPAF2-208	ENST00000496852	CFAP61	Q8NHU2	1237 aa		13.61	□□□□□ -0.23
ATPAF2-208	ENST00000496852	RHEBL1	Q8TAI7	183 aa		13.61	□□□□□ -0.23
ATPAF2-208	ENST00000496852	ZDHHC1	Q8WTX9	485 aa		13.61	□□□□□ -0.23
ATPAF2-208	ENST00000496852	PATE1	Q8WXA2	126 aa		13.61	□□□□□ -0.23
ATPAF2-208	ENST00000496852	FOPNL	Q96NB1	174 aa		13.61	□□□□□ -0.23
ATPAF2-208	ENST00000496852	ATOH8	Q96SQ7	321 aa		13.61	□□□□□ -0.23
ATPAF2-208	ENST00000496852	ALG9	Q9H6U8	611 aa		13.61	□□□□□ -0.23
ATPAF2-208	ENST00000496852	CNOT10	Q9H9A5	744 aa	Known RBP	13.61	□□□□□ -0.23
ATPAF2-208	ENST00000496852	SEMA4G	Q9NTN9	838 aa		13.61	□□□□□ -0.23
ATPAF2-208	ENST00000496852	NCDN	Q9UBB6	729 aa		13.61	□□□□□ -0.23
ATPAF2-208	ENST00000496852	ASF1A	Q9Y294	204 aa		13.61	□□□□□ -0.23
ATPAF2-208	ENST00000496852	RP1	P56715	2156 aa		13.61	□□□□□ -0.23
ATPAF2-208	ENST00000496852	ARHGEF33	A8MVX0	844 aa		13.6	□□□□□ -0.23
ATPAF2-208	ENST00000496852	TARM1	B6A8C7	271 aa		13.6	□□□□□ -0.23
ATPAF2-208	ENST00000496852	PRPF4	O43172	522 aa	Known RBP eCLIP	13.6	□□□□□ -0.23
ATPAF2-208	ENST00000496852	PCDHGA12	O60330	932 aa		13.6	□□□□□ -0.23
ATPAF2-208	ENST00000496852	NOBOX	O60393	691 aa		13.6	□□□□□ -0.23
ATPAF2-208	ENST00000496852	C1orf105	O95561	183 aa		13.6	□□□□□ -0.23
ATPAF2-208	ENST00000496852	SBK3	P0C264	359 aa		13.6	□□□□□ -0.23
ATPAF2-208	ENST00000496852	ZNF883	P0CG24	379 aa		13.6	□□□□□ -0.23
ATPAF2-208	ENST00000496852	SLC2A4	P14672	509 aa		13.6	□□□□□ -0.23
ATPAF2-208	ENST00000496852	KPNA2	P52292	529 aa	Known RBP	13.6	□□□□□ -0.23
ATPAF2-208	ENST00000496852	CSRP2	Q16527	193 aa		13.6	□□□□□ -0.23
ATPAF2-208	ENST00000496852	PHKG1	Q16816	387 aa		13.6	□□□□□ -0.23
ATPAF2-208	ENST00000496852	EEF1AKMT2	Q5JPI9	291 aa	Known RBP	13.6	□□□□□ -0.23
ATPAF2-208	ENST00000496852	HHAT	Q5VTY9	493 aa		13.6	□□□□□ -0.23
ATPAF2-208	ENST00000496852	TTC19	Q6DKK2	380 aa	Predicted RBP	13.6	□□□□□ -0.23
ATPAF2-208	ENST00000496852	OGFOD3	Q6PK18	319 aa		13.6	□□□□□ -0.23
ATPAF2-208	ENST00000496852	C17orf82	Q86X59	251 aa	Predicted RBP	13.6	□□□□□ -0.23
ATPAF2-208	ENST00000496852	SFRP1	Q8N474	314 aa		13.6	□□□□□ -0.23
ATPAF2-208	ENST00000496852	FBXO15	Q8NCQ5	510 aa	Predicted RBP	13.6	□□□□□ -0.23
ATPAF2-208	ENST00000496852	OR5AR1	Q8NGP9	310 aa		13.6	□□□□□ -0.23
ATPAF2-208	ENST00000496852	OR5K2	Q8NHB8	316 aa		13.6	□□□□□ -0.23
ATPAF2-208	ENST00000496852	STAG3L4	Q8TBR4	150 aa		13.6	□□□□□ -0.23
ATPAF2-208	ENST00000496852	FAM111A	Q96PZ2	611 aa		13.6	□□□□□ -0.23
ATPAF2-208	ENST00000496852	SLC12A9	Q9BXP2	914 aa		13.6	□□□□□ -0.23
ATPAF2-208	ENST00000496852	PARD6A	Q9NPB6	346 aa		13.6	□□□□□ -0.23
ATPAF2-208	ENST00000496852	IMP3	Q9NV31	184 aa	Known RBP	13.6	□□□□□ -0.23
ATPAF2-208	ENST00000496852	DNAAF2	Q9NVR5	837 aa	Known RBP	13.6	□□□□□ -0.23
ATPAF2-208	ENST00000496852	SLC17A7	Q9P2U7	560 aa		13.6	□□□□□ -0.23
ATPAF2-208	ENST00000496852	XPR1	Q9UBH6	696 aa		13.6	□□□□□ -0.23
ATPAF2-208	ENST00000496852	PDE10A	Q9Y233	779 aa		13.6	□□□□□ -0.23
ATPAF2-208	ENST00000496852	PLLP	Q9Y342	182 aa		13.6	□□□□□ -0.23
ATPAF2-208	ENST00000496852	FRYL	O94915	3013 aa		13.6	□□□□□ -0.23
ATPAF2-208	ENST00000496852	KIR2DS5	A0A0G2JLQ3	304 aa		13.59	□□□□□ -0.23
ATPAF2-208	ENST00000496852		A0A0G2JNG1	304 aa		13.59	□□□□□ -0.23
ATPAF2-208	ENST00000496852		B4DGG1	531 aa		13.59	□□□□□ -0.23
ATPAF2-208	ENST00000496852	KIR2DS3	K7RE56	304 aa		13.59	□□□□□ -0.23
ATPAF2-208	ENST00000496852	PLIN3	O60664	434 aa		13.59	□□□□□ -0.23
ATPAF2-208	ENST00000496852	KERA	O60938	352 aa		13.59	□□□□□ -0.23
ATPAF2-208	ENST00000496852	ZWINT	O95229	277 aa		13.59	□□□□□ -0.23
ATPAF2-208	ENST00000496852	CAT	P04040	527 aa	Known RBP	13.59	□□□□□ -0.23

Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms