RNA–Protein interactions for RNA: ENST00000496342.1

RHBDD3-207, Transcript of rhomboid domain containing 3, humanhuman

TSL 2

Gene RHBDD3, Length 849 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3-207ENST00000496342 WDR83Q9BRX9 315 aaKnown RBP17.06■□□□□ 0.32
RHBDD3-207ENST00000496342 DPH1Q9BZG8 443 aa17.06■□□□□ 0.32
RHBDD3-207ENST00000496342 KLHL25Q9H0H3 589 aa17.06■□□□□ 0.32
RHBDD3-207ENST00000496342 SRMSQ9H3Y6 488 aa17.06■□□□□ 0.32
RHBDD3-207ENST00000496342 SLC17A6Q9P2U8 582 aa17.06■□□□□ 0.32
RHBDD3-207ENST00000496342 ANKRD12Q6UB98 2062 aa17.06■□□□□ 0.32
RHBDD3-207ENST00000496342 TLCD2A6NGC4 264 aa17.05■□□□□ 0.32
RHBDD3-207ENST00000496342 CCDC188H7C350 402 aa17.05■□□□□ 0.32
RHBDD3-207ENST00000496342 EFSO43281 561 aa17.05■□□□□ 0.32
RHBDD3-207ENST00000496342 USP1O94782 785 aa17.05■□□□□ 0.32
RHBDD3-207ENST00000496342 PVRP15151 417 aa17.05■□□□□ 0.32
RHBDD3-207ENST00000496342 FOLR1P15328 257 aa17.05■□□□□ 0.32
RHBDD3-207ENST00000496342 BDKRB1P46663 353 aa17.05■□□□□ 0.32
RHBDD3-207ENST00000496342 ITGA8P53708 1063 aa17.05■□□□□ 0.32
RHBDD3-207ENST00000496342 RAB15P59190 212 aa17.05■□□□□ 0.32
RHBDD3-207ENST00000496342 ETF1P62495 437 aaKnown RBP17.05■□□□□ 0.32
RHBDD3-207ENST00000496342 ARMC6Q6NXE6 501 aa17.05■□□□□ 0.32
RHBDD3-207ENST00000496342 KLHL35Q6PF15 583 aa17.05■□□□□ 0.32
RHBDD3-207ENST00000496342 TRIM73Q86UV7 250 aa17.05■□□□□ 0.32
RHBDD3-207ENST00000496342 ZFPM2Q8WW38 1151 aa17.05■□□□□ 0.32
RHBDD3-207ENST00000496342 TRIT1Q9H3H1 467 aaKnown RBP17.05■□□□□ 0.32
RHBDD3-207ENST00000496342 C20orf96Q9NUD7 363 aaPredicted RBP17.05■□□□□ 0.32
RHBDD3-207ENST00000496342 POMT2Q9UKY4 750 aa17.05■□□□□ 0.32
RHBDD3-207ENST00000496342 SSUH2Q9Y2M2 353 aa17.05■□□□□ 0.32
RHBDD3-207ENST00000496342 NFS1Q9Y697 457 aa17.05■□□□□ 0.32
RHBDD3-207ENST00000496342 ITPR1Q14643 2758 aa17.05■□□□□ 0.32
RHBDD3-207ENST00000496342 STMND1H3BQB6 276 aa17.04■□□□□ 0.32
RHBDD3-207ENST00000496342 POLR1CO15160 346 aaPredicted RBP17.04■□□□□ 0.32
RHBDD3-207ENST00000496342 TP73O15350 636 aa17.04■□□□□ 0.32
RHBDD3-207ENST00000496342 TOX3O15405 576 aaPredicted RBP17.04■□□□□ 0.32
RHBDD3-207ENST00000496342 TIAF1O95411 115 aa17.04■□□□□ 0.32
RHBDD3-207ENST00000496342 S1PR4O95977 384 aa17.04■□□□□ 0.32
RHBDD3-207ENST00000496342 APOA4P06727 396 aa17.04■□□□□ 0.32
RHBDD3-207ENST00000496342 NELFEP18615 380 aaKnown RBP17.04■□□□□ 0.32
RHBDD3-207ENST00000496342 TMPRSS3P57727 454 aa17.04■□□□□ 0.32
RHBDD3-207ENST00000496342 THOC5Q13769 683 aaKnown RBP17.04■□□□□ 0.32
RHBDD3-207ENST00000496342 CRYMQ14894 314 aa17.04■□□□□ 0.32
RHBDD3-207ENST00000496342 LONRF1Q17RB8 773 aa17.04■□□□□ 0.32
RHBDD3-207ENST00000496342 HIBCHQ6NVY1 386 aaPredicted RBP17.04■□□□□ 0.32
RHBDD3-207ENST00000496342 CEACAM20Q6UY09 585 aa17.04■□□□□ 0.32
RHBDD3-207ENST00000496342 TIPARPQ7Z3E1 657 aaKnown RBP17.04■□□□□ 0.32
RHBDD3-207ENST00000496342 SDCCAG8Q86SQ7 713 aaPredicted RBP17.04■□□□□ 0.32
RHBDD3-207ENST00000496342 HOOK3Q86VS8 718 aa17.04■□□□□ 0.32
RHBDD3-207ENST00000496342 AMIGO1Q86WK6 493 aa17.04■□□□□ 0.32
RHBDD3-207ENST00000496342 ADGRF3Q8IZF5 1079 aa17.04■□□□□ 0.32
RHBDD3-207ENST00000496342 OR5K2Q8NHB8 316 aa17.04■□□□□ 0.32
RHBDD3-207ENST00000496342 SLC41A2Q96JW4 573 aa17.04■□□□□ 0.32
RHBDD3-207ENST00000496342 C16orf45Q96MC5 204 aaPredicted RBP17.04■□□□□ 0.32
RHBDD3-207ENST00000496342 IL17FQ96PD4 163 aa17.04■□□□□ 0.32
RHBDD3-207ENST00000496342 SLC30A3Q99726 388 aa17.04■□□□□ 0.32
RHBDD3-207ENST00000496342 TSSK1BQ9BXA7 367 aa17.04■□□□□ 0.32
RHBDD3-207ENST00000496342 TFB2MQ9H5Q4 396 aaKnown RBP17.04■□□□□ 0.32
RHBDD3-207ENST00000496342 PLAC1Q9HBJ0 212 aa17.04■□□□□ 0.32
RHBDD3-207ENST00000496342 FBXO8Q9NRD0 319 aa17.04■□□□□ 0.32
RHBDD3-207ENST00000496342 IARS2Q9NSE4 1012 aaKnown RBP17.04■□□□□ 0.32
RHBDD3-207ENST00000496342 SPHK1Q9NYA1 384 aa17.04■□□□□ 0.32
RHBDD3-207ENST00000496342 SEMA5BQ9P283 1151 aa17.04■□□□□ 0.32
RHBDD3-207ENST00000496342 CHMP2BQ9UQN3 213 aa17.04■□□□□ 0.32
RHBDD3-207ENST00000496342 SNX24Q9Y343 169 aa17.04■□□□□ 0.32
RHBDD3-207ENST00000496342 ZFYVE26Q68DK2 2539 aa17.04■□□□□ 0.32
RHBDD3-207ENST00000496342 FER1L5A0AVI2 2057 aa17.03■□□□□ 0.32
RHBDD3-207ENST00000496342 PCM1Q15154 2024 aa17.03■□□□□ 0.32
RHBDD3-207ENST00000496342 SLC9B1P1A6NJY1 282 aa17.03■□□□□ 0.32
RHBDD3-207ENST00000496342 RAD1O60671 282 aa17.03■□□□□ 0.32
RHBDD3-207ENST00000496342 STK17BO94768 372 aa17.03■□□□□ 0.32
RHBDD3-207ENST00000496342 SEC31AO94979 1220 aaKnown RBP17.03■□□□□ 0.32
RHBDD3-207ENST00000496342 ERVK-10P10266 1014 aa17.03■□□□□ 0.32
RHBDD3-207ENST00000496342 ST6GAL1P15907 406 aa17.03■□□□□ 0.32
RHBDD3-207ENST00000496342 PGAM1P18669 254 aa17.03■□□□□ 0.32
RHBDD3-207ENST00000496342 CDH3P22223 829 aa17.03■□□□□ 0.32
RHBDD3-207ENST00000496342 PEBP1P30086 187 aaKnown RBP17.03■□□□□ 0.32
RHBDD3-207ENST00000496342 RPL21P46778 160 aaKnown RBP17.03■□□□□ 0.32
RHBDD3-207ENST00000496342 PRKAA1Q13131 559 aa17.03■□□□□ 0.32
RHBDD3-207ENST00000496342 COL9A2Q14055 689 aaPredicted RBP17.03■□□□□ 0.32
RHBDD3-207ENST00000496342 TMED2Q15363 201 aa17.03■□□□□ 0.32
RHBDD3-207ENST00000496342 GPR19Q15760 415 aa17.03■□□□□ 0.32
RHBDD3-207ENST00000496342 CCSMST1Q4G0I0 132 aa17.03■□□□□ 0.32
RHBDD3-207ENST00000496342 HSP90AA5PQ58FG0 334 aa17.03■□□□□ 0.32
RHBDD3-207ENST00000496342 MANEAQ5SRI9 462 aa17.03■□□□□ 0.32
RHBDD3-207ENST00000496342 RNF187Q5TA31 235 aaPredicted RBP17.03■□□□□ 0.32
RHBDD3-207ENST00000496342 KIAA1614Q5VZ46 1190 aa17.03■□□□□ 0.32
RHBDD3-207ENST00000496342 ZNF549Q6P9A3 640 aa17.03■□□□□ 0.32
RHBDD3-207ENST00000496342 UNC5AQ6ZN44 842 aa17.03■□□□□ 0.32
RHBDD3-207ENST00000496342 SYDE1Q6ZW31 735 aaPredicted RBP17.03■□□□□ 0.32
RHBDD3-207ENST00000496342 PCGF5Q86SE9 256 aa17.03■□□□□ 0.32
RHBDD3-207ENST00000496342 TAX1BP1Q86VP1 789 aa17.03■□□□□ 0.32
RHBDD3-207ENST00000496342 KCNMB4Q86W47 210 aa17.03■□□□□ 0.32
RHBDD3-207ENST00000496342 LRRC6Q86X45 466 aa17.03■□□□□ 0.32
RHBDD3-207ENST00000496342 FAM20CQ8IXL6 584 aa17.03■□□□□ 0.32
RHBDD3-207ENST00000496342 TBC1D21Q8IYX1 336 aa17.03■□□□□ 0.32
RHBDD3-207ENST00000496342 C2orf73Q8N5S3 287 aaPredicted RBP17.03■□□□□ 0.32
RHBDD3-207ENST00000496342 SIDT2Q8NBJ9 832 aaKnown RBP17.03■□□□□ 0.32
RHBDD3-207ENST00000496342 SERBP1Q8NC51 408 aaKnown RBP eCLIP17.03■□□□□ 0.32
RHBDD3-207ENST00000496342 ASZ1Q8WWH4 475 aa17.03■□□□□ 0.32
RHBDD3-207ENST00000496342 UBXN4Q92575 508 aa17.03■□□□□ 0.32
RHBDD3-207ENST00000496342 NKD1Q969G9 470 aa17.03■□□□□ 0.32
RHBDD3-207ENST00000496342 CFAP36Q96G28 342 aa17.03■□□□□ 0.32
RHBDD3-207ENST00000496342 RUNDC3BQ96NL0 473 aa17.03■□□□□ 0.32
RHBDD3-207ENST00000496342 PANX3Q96QZ0 392 aa17.03■□□□□ 0.32
RHBDD3-207ENST00000496342 CCNL2Q96S94 520 aaPredicted RBP17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms