RNA–Protein interactions for RNA: ENST00000496323.1

SPTBN1-205, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 2

Gene SPTBN1, Length 2,225 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-205ENST00000496323 PTCHD3Q3KNS1 767 aa13.36□□□□□ -0.27
SPTBN1-205ENST00000496323 CCSMST1Q4G0I0 132 aa13.36□□□□□ -0.27
SPTBN1-205ENST00000496323 ZNF776Q68DI1 518 aaPredicted RBP13.36□□□□□ -0.27
SPTBN1-205ENST00000496323 NEK5Q6P3R8 708 aa13.36□□□□□ -0.27
SPTBN1-205ENST00000496323 TRAPPC5Q8IUR0 188 aa13.36□□□□□ -0.27
SPTBN1-205ENST00000496323 TCAIMQ8N3R3 496 aa13.36□□□□□ -0.27
SPTBN1-205ENST00000496323 SFRP1Q8N474 314 aa13.36□□□□□ -0.27
SPTBN1-205ENST00000496323 EFCAB3Q8N7B9 438 aa13.36□□□□□ -0.27
SPTBN1-205ENST00000496323 CFAP61Q8NHU2 1237 aa13.36□□□□□ -0.27
SPTBN1-205ENST00000496323 PYCR2Q96C36 320 aa13.36□□□□□ -0.27
SPTBN1-205ENST00000496323 HIC2Q96JB3 615 aa13.36□□□□□ -0.27
SPTBN1-205ENST00000496323 CCT7Q99832 543 aa13.36□□□□□ -0.27
SPTBN1-205ENST00000496323 ZCCHC2Q9C0B9 1178 aaKnown RBP13.36□□□□□ -0.27
SPTBN1-205ENST00000496323 CD248Q9HCU0 757 aa13.36□□□□□ -0.27
SPTBN1-205ENST00000496323 SDR39U1Q9NRG7 319 aaPredicted RBP13.36□□□□□ -0.27
SPTBN1-205ENST00000496323 NKX1-2Q9UD57 310 aaPredicted RBP13.36□□□□□ -0.27
SPTBN1-205ENST00000496323 ZFR2Q9UPR6 939 aaKnown RBP13.36□□□□□ -0.27
SPTBN1-205ENST00000496323 TMEM98Q9Y2Y6 226 aa13.36□□□□□ -0.27
SPTBN1-205ENST00000496323 RNASEH2AO75792 299 aaKnown RBP13.35□□□□□ -0.27
SPTBN1-205ENST00000496323 PDE5AO76074 875 aa13.35□□□□□ -0.27
SPTBN1-205ENST00000496323 EBLN1P0CF75 366 aa13.35□□□□□ -0.27
SPTBN1-205ENST00000496323 EZRP15311 586 aaKnown RBP13.35□□□□□ -0.27
SPTBN1-205ENST00000496323 COL9A1P20849 921 aa13.35□□□□□ -0.27
SPTBN1-205ENST00000496323 TBL3Q12788 808 aaKnown RBP13.35□□□□□ -0.27
SPTBN1-205ENST00000496323 TTC23LQ6PF05 361 aa13.35□□□□□ -0.27
SPTBN1-205ENST00000496323 IL27RAQ6UWB1 636 aa13.35□□□□□ -0.27
SPTBN1-205ENST00000496323 ADAMTSL4Q6UY14 1074 aa13.35□□□□□ -0.27
SPTBN1-205ENST00000496323 FAM131CQ96AQ9 280 aa13.35□□□□□ -0.27
SPTBN1-205ENST00000496323 LINC00615Q96LM1 132 aaPredicted RBP13.35□□□□□ -0.27
SPTBN1-205ENST00000496323 LGR4Q9BXB1 951 aa13.35□□□□□ -0.27
SPTBN1-205ENST00000496323 MBNL1Q9NR56 388 aaKnown RBP13.35□□□□□ -0.27
SPTBN1-205ENST00000496323 CCL27Q9Y4X3 112 aa13.35□□□□□ -0.27
SPTBN1-205ENST00000496323 GPR45Q9Y5Y3 372 aa13.35□□□□□ -0.27
SPTBN1-205ENST00000496323 PIAS3Q9Y6X2 628 aa13.35□□□□□ -0.27
SPTBN1-205ENST00000496323 PCCBP05166 539 aa13.35□□□□□ -0.27
SPTBN1-205ENST00000496323 PIK3CGP48736 1102 aa13.35□□□□□ -0.27
SPTBN1-205ENST00000496323 KIF19Q2TAC6 998 aa13.35□□□□□ -0.27
SPTBN1-205ENST00000496323 C6orf136Q5SQH8 315 aa13.35□□□□□ -0.27
SPTBN1-205ENST00000496323 LRRC70Q7Z2Q7 622 aa13.35□□□□□ -0.27
SPTBN1-205ENST00000496323 NET1Q7Z628 596 aaPredicted RBP13.35□□□□□ -0.27
SPTBN1-205ENST00000496323 C11orf96Q7Z7L8 435 aa13.35□□□□□ -0.27
SPTBN1-205ENST00000496323 HEATR4Q86WZ0 1026 aa13.35□□□□□ -0.27
SPTBN1-205ENST00000496323 CFAP206Q8IYR0 622 aa13.35□□□□□ -0.27
SPTBN1-205ENST00000496323 SLC44A3Q8N4M1 653 aa13.35□□□□□ -0.27
SPTBN1-205ENST00000496323 SLC45A3Q96JT2 553 aa13.35□□□□□ -0.27
SPTBN1-205ENST00000496323 ATG10Q9H0Y0 220 aa13.35□□□□□ -0.27
SPTBN1-205ENST00000496323 EFCAB1Q9HAE3 211 aa13.35□□□□□ -0.27
SPTBN1-205ENST00000496323 KCNK12Q9HB15 430 aa13.35□□□□□ -0.27
SPTBN1-205ENST00000496323 TRPV5Q9NQA5 729 aa13.35□□□□□ -0.27
SPTBN1-205ENST00000496323 FARSBQ9NSD9 589 aaKnown RBP13.35□□□□□ -0.27
SPTBN1-205ENST00000496323 L3MBTL1Q9Y468 752 aa13.35□□□□□ -0.27
SPTBN1-205ENST00000496323 FFAR3O14843 346 aa13.34□□□□□ -0.27
SPTBN1-205ENST00000496323 GPR42O15529 346 aa13.34□□□□□ -0.27
SPTBN1-205ENST00000496323 VEGFDO43915 354 aa13.34□□□□□ -0.27
SPTBN1-205ENST00000496323 PRAMEF4O60810 478 aa13.34□□□□□ -0.27
SPTBN1-205ENST00000496323 POP7O75817 140 aaKnown RBP13.34□□□□□ -0.27
SPTBN1-205ENST00000496323 WDR47O94967 919 aa13.34□□□□□ -0.27
SPTBN1-205ENST00000496323 SNRPB2P08579 225 aaKnown RBP13.34□□□□□ -0.27
SPTBN1-205ENST00000496323 DPP6P42658 865 aa13.34□□□□□ -0.27
SPTBN1-205ENST00000496323 STX1BP61266 288 aa13.34□□□□□ -0.27
SPTBN1-205ENST00000496323 CDK3Q00526 305 aa13.34□□□□□ -0.27
SPTBN1-205ENST00000496323 AGERQ15109 404 aa13.34□□□□□ -0.27
SPTBN1-205ENST00000496323 E2F5Q15329 346 aa13.34□□□□□ -0.27
SPTBN1-205ENST00000496323 SLC44A4Q53GD3 710 aa13.34□□□□□ -0.27
SPTBN1-205ENST00000496323 PRAMEF9Q5VWM5 478 aa13.34□□□□□ -0.27
SPTBN1-205ENST00000496323 CRTC3Q6UUV7 619 aa13.34□□□□□ -0.27
SPTBN1-205ENST00000496323 RIPOR1Q6ZS17 1223 aa13.34□□□□□ -0.27
SPTBN1-205ENST00000496323 SPATA19Q7Z5L4 167 aa13.34□□□□□ -0.27
SPTBN1-205ENST00000496323 RALGPS2Q86X27 583 aaPredicted RBP13.34□□□□□ -0.27
SPTBN1-205ENST00000496323 MIER2Q8N344 545 aa13.34□□□□□ -0.27
SPTBN1-205ENST00000496323 FBXL8Q96CD0 374 aa13.34□□□□□ -0.27
SPTBN1-205ENST00000496323 AIG1Q9NVV5 245 aa13.34□□□□□ -0.27
SPTBN1-205ENST00000496323 FBXL12Q9NXK8 326 aa13.34□□□□□ -0.27
SPTBN1-205ENST00000496323 LIMD1Q9UGP4 676 aa13.34□□□□□ -0.27
SPTBN1-205ENST00000496323 CIDEBQ9UHD4 219 aa13.34□□□□□ -0.27
SPTBN1-205ENST00000496323 TRPS1Q9UHF7 1281 aa13.34□□□□□ -0.27
SPTBN1-205ENST00000496323 GPR34Q9UPC5 381 aa13.34□□□□□ -0.27
SPTBN1-205ENST00000496323 SLC22A14Q9Y267 594 aa13.34□□□□□ -0.27
SPTBN1-205ENST00000496323 PRKAB1Q9Y478 270 aa13.34□□□□□ -0.27
SPTBN1-205ENST00000496323 LIN7AO14910 233 aaPredicted RBP13.33□□□□□ -0.27
SPTBN1-205ENST00000496323 LSM1O15116 133 aaKnown RBP13.33□□□□□ -0.27
SPTBN1-205ENST00000496323 KLF8O95600 359 aaPredicted RBP13.33□□□□□ -0.27
SPTBN1-205ENST00000496323 IDO1P14902 403 aa13.33□□□□□ -0.27
SPTBN1-205ENST00000496323 ITPKAP23677 461 aa13.33□□□□□ -0.27
SPTBN1-205ENST00000496323 CCND1P24385 295 aa13.33□□□□□ -0.27
SPTBN1-205ENST00000496323 HMOX2P30519 316 aa13.33□□□□□ -0.27
SPTBN1-205ENST00000496323 BDKRB1P46663 353 aa13.33□□□□□ -0.27
SPTBN1-205ENST00000496323 PFN3P60673 137 aa13.33□□□□□ -0.27
SPTBN1-205ENST00000496323 GTF2H3Q13889 308 aa13.33□□□□□ -0.27
SPTBN1-205ENST00000496323 MAPRE2Q15555 327 aa13.33□□□□□ -0.27
SPTBN1-205ENST00000496323 GSTA3Q16772 222 aa13.33□□□□□ -0.27
SPTBN1-205ENST00000496323 LRIT3Q3SXY7 679 aa13.33□□□□□ -0.27
SPTBN1-205ENST00000496323 HPS6Q86YV9 775 aa13.33□□□□□ -0.27
SPTBN1-205ENST00000496323 FBXW8Q8N3Y1 598 aa13.33□□□□□ -0.27
SPTBN1-205ENST00000496323 CHCHD4Q8N4Q1 142 aa13.33□□□□□ -0.27
SPTBN1-205ENST00000496323 MAGEC3Q8TD91 643 aa13.33□□□□□ -0.27
SPTBN1-205ENST00000496323 KCNV2Q8TDN2 545 aa13.33□□□□□ -0.27
SPTBN1-205ENST00000496323 ZNF514Q96K75 400 aaPredicted RBP13.33□□□□□ -0.27
SPTBN1-205ENST00000496323 TEX37Q96LM6 180 aa13.33□□□□□ -0.27
SPTBN1-205ENST00000496323 C1orf50Q9BV19 199 aa13.33□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms